Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 6.6e-163 577.4 311 100.0
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 5.5e-85 318.5 300 64.3
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 3.6e-84 315.8 223 73.5
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 6.1e-84 315.1 299 62.5
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 1.0e-83 314.3 223 72.6
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 7.5e-82 308.1 199 76.4
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 9.7e-82 307.8 288 59.4
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 1.3e-81 307.4 218 72.9
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 2.2e-81 306.6 199 75.9
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 2.2e-81 306.6 218 70.6
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 2.2e-78 296.6 216 69.4
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 6.5e-78 295.0 267 59.9
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 3.2e-77 292.7 201 74.6
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 9.4e-77 291.2 219 69.9
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.7e-76 289.7 218 66.1
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 2.7e-76 289.7 218 66.1
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 3.6e-76 289.3 217 69.6
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 8.0e-76 288.1 211 70.1
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.0e-76 288.1 219 69.4
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 1.4e-75 287.3 206 69.4
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.4e-75 287.3 219 69.4
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.3e-75 286.6 219 69.4
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 2.3e-75 286.6 199 70.9
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 2.3e-75 286.6 210 66.7
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 3.0e-75 286.2 194 71.6
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.0e-75 285.8 223 67.7
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.0e-75 285.8 223 67.7
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 4.0e-75 285.8 209 69.9
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 4.0e-75 285.8 194 70.1
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 5.2e-75 285.4 226 63.7
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 8.8e-75 284.6 193 71.5
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 9.8e-74 281.2 199 67.8
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.7e-73 280.4 208 64.9
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 1.7e-73 280.4 209 67.5
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 2.2e-73 280.0 210 65.7
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 2.8e-73 279.6 211 66.4
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 3.7e-73 279.3 195 69.2
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 4.9e-73 278.9 209 68.9
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 6.3e-73 278.5 195 71.8
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.4e-72 277.3 189 74.1
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 5.4e-72 275.4 210 65.7
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 5.4e-72 275.4 220 65.9
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 5.4e-72 275.4 226 65.0
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 9.1e-72 274.6 212 65.1
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.7e-71 273.1 218 64.7
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.8e-70 269.2 219 63.9
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 5.0e-70 268.9 201 67.7
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.5e-69 267.3 201 67.7
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 2.5e-69 266.5 193 66.3
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 3.3e-69 266.2 218 64.7
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 5.5e-69 265.4 200 67.0
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 5.5e-69 265.4 208 62.0
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.2e-68 264.2 194 67.0
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 1.2e-68 264.2 211 63.5
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.6e-68 263.8 213 64.8
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 8.0e-68 261.5 198 66.2
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 8.0e-68 261.5 201 63.7
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 8.0e-68 261.5 216 63.9
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 1.0e-67 261.2 198 65.7
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 4.0e-67 259.2 194 64.9
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 4.0e-67 259.2 225 60.4
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 8.9e-67 258.1 216 63.0
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 1.2e-66 257.7 194 64.9
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.2e-66 257.7 231 57.6
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 1.5e-66 257.3 194 64.9
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 1.5e-66 257.3 194 64.9
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.5e-66 257.3 215 62.3
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 2.6e-66 256.5 194 64.4
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 3.4e-66 256.1 194 64.4
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 4.4e-66 255.8 194 64.9
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 4.4e-66 255.8 193 68.9
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 7.5e-66 255.0 194 63.9
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 3.7e-65 252.7 194 63.9
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.4e-64 250.8 216 60.2
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 2.4e-64 250.0 194 63.4
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 2.4e-64 250.0 204 60.3
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 3.2e-64 249.6 216 58.8
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 4.1e-64 249.2 199 64.3
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.6e-63 247.3 194 63.4
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 2.0e-63 246.9 298 50.0
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 4.6e-63 245.7 194 62.9
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 1.0e-62 244.6 194 62.9
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.3e-61 239.6 255 54.5
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 9.5e-61 238.0 217 61.3
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.2e-60 237.7 162 70.4
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 1.8e-59 233.8 193 57.0
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.4e-58 229.2 207 56.5
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.8e-58 228.8 220 59.1
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 6.4e-57 225.3 195 60.5
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 3.2e-56 223.0 195 57.4
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 7.0e-56 221.9 194 58.8
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.3e-54 217.6 218 54.1
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 3.3e-53 213.0 203 54.2
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 6.8e-51 205.3 194 57.2
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 2.0e-50 203.8 148 68.9
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 4.4e-50 202.6 186 52.2
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 5.8e-50 202.2 196 56.6
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 9.8e-50 201.4 196 51.5
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.7e-49 199.5 189 52.4
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 4.6e-47 192.6 151 63.6
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 3.6e-44 183.0 149 69.8
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.4e-43 181.0 152 62.5
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 2.9e-41 173.3 129 70.5
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 2.4e-40 170.2 150 64.0
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 3.2e-40 169.9 187 50.8
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.6e-39 167.5 136 64.0
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 2.7e-39 166.8 193 47.7
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.6e-36 157.5 107 72.9
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.4e-32 143.7 131 57.3
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.1e-30 136.0 116 62.1
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 4.3e-29 132.9 124 58.1
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 1.4e-27 127.9 150 51.3
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 3.1e-27 126.7 144 51.4
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 5.8e-26 122.5 186 37.1
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 5.4e-24 115.9 71 76.1
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.5e-23 113.2 112 55.4
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 3.3e-21 106.7 89 62.9
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.6e-20 104.4 128 49.2
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 9.0e-19 98.6 215 32.6
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.5e-18 96.3 95 56.8
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 6.4e-17 92.4 107 43.9
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 5.3e-11 72.8 46 69.6
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 1.9e-08 64.3 85 40.0
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 8.7e-06 55.5 135 34.1
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.7e-06 55.5 64 53.1


User provided reference genes

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