Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 3.3e-141 505.0 249 100.0
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 3.9e-134 481.5 249 94.4
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 7.2e-128 460.7 249 88.8
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 9.4e-128 460.3 248 88.7
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 2.7e-127 458.8 255 88.6
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 2.3e-126 455.7 249 89.6
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 3.0e-126 455.3 248 87.1
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.2e-125 453.4 248 87.1
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.6e-125 452.2 248 86.7
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.6e-125 452.2 248 86.7
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 9.7e-125 450.3 249 87.6
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 9.7e-125 450.3 249 87.6
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 1.3e-124 449.9 249 85.9
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 6.3e-124 447.6 249 87.6
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 1.1e-123 446.8 249 85.5
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 7.0e-123 444.1 249 86.3
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 2.7e-122 442.2 260 82.7
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 4.5e-122 441.4 275 78.5
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 4.5e-122 441.4 250 85.6
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 5.9e-122 441.0 249 85.1
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 7.7e-122 440.7 250 86.4
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 7.7e-122 440.7 250 86.4
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 1.0e-121 440.3 250 85.2
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.0e-121 440.3 249 85.5
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 1.3e-121 439.9 250 84.8
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.7e-121 439.5 249 85.1
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 2.9e-121 438.7 250 84.8
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 8.5e-121 437.2 249 85.9
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 1.1e-120 436.8 250 84.0
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 1.5e-120 436.4 250 84.8
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 1.9e-120 436.0 251 84.9
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 3.2e-120 435.3 248 81.0
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 4.2e-120 434.9 251 83.7
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 4.2e-120 434.9 251 83.7
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 4.2e-120 434.9 249 85.5
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 7.2e-120 434.1 250 84.4
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 2.1e-119 432.6 249 81.9
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.1e-119 432.6 249 83.9
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 2.7e-119 432.2 250 84.4
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 8.0e-119 430.6 249 84.3
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 1.8e-118 429.5 249 82.7
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 2.3e-118 429.1 251 84.5
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 3.0e-118 428.7 251 82.1
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 3.0e-118 428.7 249 82.7
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 4.0e-118 428.3 249 82.3
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 5.2e-118 427.9 249 84.3
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 6.8e-118 427.6 249 82.3
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 6.8e-118 427.6 249 81.9
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 8.8e-118 427.2 253 83.4
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 2.6e-117 425.6 255 83.1
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 3.4e-117 425.2 254 82.3
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 4.4e-117 424.9 250 82.0
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 4.4e-117 424.9 249 82.7
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 4.4e-117 424.9 276 76.4
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 4.4e-117 424.9 249 80.7
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 1.3e-116 423.3 252 82.5
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 1.7e-116 422.9 249 79.9
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.7e-116 422.9 249 83.1
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 1.7e-116 422.9 249 81.5
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 2.8e-116 422.2 253 81.4
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.8e-116 422.2 271 78.2
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 2.8e-116 422.2 290 73.8
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 4.8e-116 421.4 249 79.5
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 4.8e-116 421.4 252 82.1
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 6.3e-116 421.0 249 79.9
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 6.3e-116 421.0 249 80.7
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 6.3e-116 421.0 249 80.7
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 1.1e-115 420.2 250 81.2
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.4e-115 419.9 249 79.5
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 1.8e-115 419.5 250 80.8
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 2.4e-115 419.1 248 79.4
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 3.1e-115 418.7 249 79.5
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 3.1e-115 418.7 255 81.2
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 3.1e-115 418.7 249 79.1
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 7.7e-114 414.1 248 79.8
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 3.8e-113 411.8 252 77.4
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 1.1e-112 410.2 251 77.7
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 2.5e-112 409.1 234 81.6
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 3.2e-112 408.7 252 81.3
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 4.2e-112 408.3 248 78.2
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 5.5e-112 407.9 249 80.7
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 9.5e-112 407.1 252 81.0
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 1.5e-109 399.8 248 77.4
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 6.3e-108 394.4 222 82.4
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.4e-107 392.5 248 79.0
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 4.1e-107 391.7 222 81.5
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 3.5e-106 388.7 231 78.8
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 3.5e-106 388.7 231 78.8
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 2.9e-105 385.6 248 77.0
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 4.3e-104 381.7 249 77.9
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 3.0e-102 375.6 254 71.7
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 3.0e-102 375.6 251 72.1
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 4.4e-101 371.7 221 81.0
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 5.7e-101 371.3 219 84.0
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 5.7e-101 371.3 248 72.6
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 4.9e-100 368.2 449 48.1
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.1e-99 367.1 250 74.8
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 7.0e-99 364.4 208 85.1
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 1.6e-98 363.2 251 69.7
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 6.6e-97 357.8 253 75.1
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 9.5e-96 354.0 279 67.4
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 2.8e-95 352.4 237 73.8
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 6.2e-95 351.3 251 70.9
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 2.9e-92 342.4 235 70.2
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 3.7e-92 342.0 248 65.7
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 6.4e-92 341.3 250 71.6
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 2.0e-90 336.3 207 77.8
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 3.9e-89 332.0 242 67.8
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 1.1e-88 330.5 249 65.5
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 4.3e-88 328.6 249 68.7
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 9.5e-88 327.4 190 82.6
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 8.1e-87 324.3 248 64.5
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.5e-85 320.1 195 76.9
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 9.9e-85 317.4 268 64.2
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.2e-82 310.5 278 61.2
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 3.6e-79 298.9 335 53.7
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.5e-77 293.5 248 64.1
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 2.6e-77 292.7 210 71.9
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 4.4e-77 292.0 202 73.3
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 3.9e-73 278.9 207 68.1
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 5.6e-72 275.0 157 82.2
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 2.4e-70 269.6 227 54.6
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 4.4e-69 265.4 157 80.9
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 1.6e-66 256.9 228 52.6
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 6.0e-66 255.0 170 74.7
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 2.5e-64 249.6 230 53.9
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 4.3e-64 248.8 283 51.2
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.1e-62 244.2 145 77.9
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.2e-60 236.5 142 82.4
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 3.9e-57 225.7 157 71.3
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 8.7e-57 224.6 206 59.2
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.5e-48 197.2 114 81.6
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 5.5e-43 178.7 115 73.9
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 2.8e-39 166.4 129 68.2
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 3.1e-38 162.9 91 82.4
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 3.8e-36 156.0 92 79.3
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 2.1e-34 150.2 248 43.1
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 3.9e-33 146.0 174 49.4
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-29 131.7 102 65.7
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 8.5e-20 101.7 51 88.2


User provided reference genes

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