Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.5e-55 219.2 103 100.0
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 8.9e-32 140.2 92 75.0
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 3.9e-27 124.8 97 62.9
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.5e-26 122.9 89 68.5
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 1.5e-26 122.9 89 68.5
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.9e-26 122.5 97 62.9
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 3.3e-26 121.7 89 67.4
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 7.3e-26 120.6 92 62.0
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 2.1e-25 119.0 87 64.4
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 3.6e-25 118.2 87 64.4
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 1.8e-24 115.9 93 62.4
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 4.0e-24 114.8 92 66.3
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 4.0e-24 114.8 91 62.6
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 8.9e-24 113.6 89 66.3
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 8.9e-24 113.6 91 63.7
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 2.0e-23 112.5 88 61.4
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 2.0e-23 112.5 92 64.1
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 2.6e-23 112.1 95 60.0
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 3.4e-23 111.7 96 59.4
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.4e-23 111.7 96 59.4
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 5.8e-23 110.9 88 61.4
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 5.8e-23 110.9 96 59.4
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 7.6e-23 110.5 89 62.9
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 7.6e-23 110.5 87 60.9
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 9.9e-23 110.2 91 61.5
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 9.9e-23 110.2 96 59.4
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 1.3e-22 109.8 105 55.2
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 1.7e-22 109.4 101 56.4
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 2.2e-22 109.0 87 63.2
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 2.2e-22 109.0 92 63.0
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 3.8e-22 108.2 107 51.4
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.8e-22 108.2 96 57.3
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 3.8e-22 108.2 104 55.8
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 4.9e-22 107.8 95 55.8
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 8.4e-22 107.1 90 60.0
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 1.1e-21 106.7 98 57.1
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.4e-21 106.3 106 52.8
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 1.4e-21 106.3 92 63.0
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.9e-21 105.9 100 57.0
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.9e-21 105.9 101 54.5
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 2.4e-21 105.5 92 55.4
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 3.2e-21 105.1 89 61.8
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.2e-21 105.1 106 51.9
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 4.2e-21 104.8 105 53.3
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 4.2e-21 104.8 101 53.5
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 4.2e-21 104.8 101 53.5
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 4.2e-21 104.8 101 54.5
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.4e-21 104.4 101 52.5
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 7.1e-21 104.0 100 56.0
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 9.2e-21 103.6 103 52.4
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 9.2e-21 103.6 96 50.0
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.2e-20 103.2 92 58.7
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 6.0e-20 100.9 96 51.0
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.8e-20 100.5 101 52.5
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 7.8e-20 100.5 101 50.5
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 7.8e-20 100.5 88 55.7
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 3.9e-19 98.2 89 57.3
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 3.9e-19 98.2 88 58.0
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 5.1e-19 97.8 95 52.6
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 5.1e-19 97.8 97 51.5
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 6.6e-19 97.4 94 51.1
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 5.6e-18 94.4 86 53.5
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 1.6e-17 92.8 86 55.8
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 6.2e-17 90.9 87 52.9
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 8.1e-17 90.5 86 57.0
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 1.4e-16 89.7 100 48.0
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 2.4e-16 89.0 87 56.3
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 3.1e-16 88.6 105 48.6
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 4.0e-16 88.2 88 54.5
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 4.0e-16 88.2 88 50.0
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 1.2e-15 86.7 84 54.8
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.5e-15 86.3 65 67.7
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 3.4e-15 85.1 96 49.0
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 8.4e-14 80.5 94 43.6
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 2.4e-13 79.0 112 43.8
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 4.2e-13 78.2 122 37.7
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 1.6e-09 66.2 77 46.8


User provided reference genes

Program Settings