Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1420 Trochodendron aralioides HOM05D002678 ORTHO05D002920 7.2e-68 260.4 126 100.0
TAR628G0078 Trochodendron aralioides HOM05D002678 ORTHO05D002920 3.3e-44 181.8 114 76.3
TAR628G0578 Trochodendron aralioides HOM05D002678 ORTHO05D002920 1.7e-40 169.5 120 75.8
TAR628G0860 Trochodendron aralioides HOM05D002678 ORTHO05D002920 7.3e-36 154.1 120 69.2
TAR628G1455 Trochodendron aralioides HOM05D002678 ORTHO05D002920 6.8e-34 147.5 120 65.0
TAR628G0049 Trochodendron aralioides HOM05D002678 ORTHO05D002920 3.9e-29 131.7 94 75.5
TAR625G1454 Trochodendron aralioides HOM05D002678 ORTHO05D002920 5.1e-29 131.3 125 60.8
Nn5g29477 Nelumbo nucifera HOM05D002678 ORTHO05D002920 2.1e-22 109.4 105 59.0
QL06p044552 Quercus lobata HOM05D002678 ORTHO05D002920 9.6e-20 100.5 131 50.4
ATR0733G097 Amborella trichopoda HOM05D002678 ORTHO05D002920 1.6e-19 99.8 112 42.9
CiPaw.02G014300 Carya illinoinensis HOM05D002678 ORTHO05D002920 4.8e-19 98.2 130 48.5
SEGI_03855 Sequoiadendron giganteum HOM05D002678 ORTHO05D002920 1.3e-16 90.1 98 51.0
Aqoxy5G01728 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 1.7e-16 89.7 104 47.1
Dinv39937 Davidia involucrata HOM05D002678 ORTHO05D002920 1.1e-15 87.0 102 52.9
Cfa004251 Carpinus fangiana HOM05D002678 ORTHO05D002920 5.4e-15 84.7 130 46.2
MBI16_g10976_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 2.1e-14 82.8 119 42.0
CiPaw.01G030800 Carya illinoinensis HOM05D002678 ORTHO05D002920 2.7e-14 82.4 119 45.4
Haze_15148 Corylus avellana HOM05D002678 ORTHO05D002920 1.3e-13 80.1 131 45.0
ATR0759G110 Amborella trichopoda HOM05D002678 ORTHO05D002920 5.6e-12 74.7 82 46.3
SEGI_24546 Sequoiadendron giganteum HOM05D002678 ORTHO05D002920 5.6e-12 74.7 86 44.2
Cc07_g05260 Coffea canephora HOM05D002678 ORTHO05D002920 4.8e-11 71.6 131 44.3
Ca_11435_v3 Cicer arietinum L. HOM05D002678 ORTHO05D002920 1.4e-10 70.1 104 41.3
Rhsim05G0185100 Rhododendron simsii HOM05D002678 ORTHO05D002920 4.0e-10 68.6 102 36.3
CiPaw.01G030700 Carya illinoinensis HOM05D002678 ORTHO05D002920 5.3e-10 68.2 119 42.0
MBI05_g32634_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 5.3e-10 68.2 83 43.4
MBI14_g21098_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 9.0e-10 67.4 107 40.2
Nn1g01330 Nelumbo nucifera HOM05D002678 ORTHO05D002920 9.0e-10 67.4 73 50.7
QL01p034494 Quercus lobata HOM05D002678 ORTHO05D002920 9.0e-10 67.4 103 37.9
Aqoxy2G01947 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 2.0e-09 66.2 82 45.1
Dinv06291 Davidia involucrata HOM05D002678 ORTHO05D002920 2.0e-09 66.2 82 42.7
TAR623G1692 Trochodendron aralioides HOM05D002678 ORTHO05D002920 3.4e-09 65.5 82 45.1
Aqoxy4G03090 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 4.5e-09 65.1 111 39.6
Glyma.19G175800 Glycine max HOM05D002678 ORTHO05D002920 5.8e-09 64.7 97 40.2
TAR636G3383 Trochodendron aralioides HOM05D002678 ORTHO05D002920 5.8e-09 64.7 106 37.7
CSS0019295 Camellia sinensis var. sinensis HOM05D002678 ORTHO05D002920 7.6e-09 64.3 71 45.1
Duzib170G1033 Durio zibethinus HOM05D002678 ORTHO05D002920 7.6e-09 64.3 81 44.4
Nn2g12832 Nelumbo nucifera HOM05D002678 ORTHO05D002920 7.6e-09 64.3 104 38.5
Oeu035168.1 Olea europaea HOM05D002678 ORTHO05D002920 7.6e-09 64.3 82 41.5
TPR.G35579 Trifolium pratense HOM05D002678 ORTHO05D002920 9.9e-09 63.9 107 39.3
Nn2g10547 Nelumbo nucifera HOM05D002678 ORTHO05D002920 1.3e-08 63.5 106 36.8
Phvul.007G160800 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 1.3e-08 63.5 102 40.2
Hma1.2p1_0739F.1_g211150 Hydrangea macrophylla HOM05D052157 ORTHO05D002920 1.7e-08 63.2 53 56.6
Hma1.2p1_1528F.1_g289075 Hydrangea macrophylla HOM05D052157 ORTHO05D002920 1.7e-08 63.2 53 56.6
SalBow3G2888 Salvia bowleyana HOM05D002678 ORTHO05D002920 1.7e-08 63.2 82 42.7
TPR.G10526 Trifolium pratense HOM05D002678 ORTHO05D002920 1.7e-08 63.2 100 39.0
EL10Ac7g16278 Beta vulgaris HOM05D002678 ORTHO05D002920 2.9e-08 62.4 103 38.8
Cpa.g.sc3922.1 Carica papaya HOM05D002678 ORTHO05D002920 2.9e-08 62.4 79 44.3
RcHm_v2.0_Chr3g0467961 Rosa chinensis HOM05D002678 ORTHO05D002920 2.9e-08 62.4 102 38.2
Lalb_Chr02g0153371 Lupinus albus HOM05D002678 ORTHO05D002920 3.8e-08 62.0 105 37.1
Dinv35670 Davidia involucrata HOM05D002678 ORTHO05D002920 4.9e-08 61.6 86 38.4
Glyma.03G175100 Glycine max HOM05D002678 ORTHO05D002920 4.9e-08 61.6 97 38.1
Gohir.A01G218900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 4.9e-08 61.6 96 40.6
Gorai.002G253000 Gossypium raimondii HOM05D002678 ORTHO05D002920 4.9e-08 61.6 102 40.2
Medtr7g100340 Medicago truncatula HOM05D002678 ORTHO05D002920 4.9e-08 61.6 102 40.2
Rhsim13G0088900 Rhododendron simsii HOM05D002678 ORTHO05D002920 4.9e-08 61.6 68 47.1
CANSAT80G0424 Cannabis sativa HOM05D002678 ORTHO05D002920 6.4e-08 61.2 108 38.9
Psat6g069440 Pisum sativum HOM05D002678 ORTHO05D002920 6.4e-08 61.2 100 37.0
HPP92_012460 Vanilla planifolia HOM05D002678 ORTHO05D002920 6.4e-08 61.2 98 38.8
Actinidia37266 Actinidia chinensis HOM05D002678 ORTHO05D002920 8.4e-08 60.8 68 45.6
AUR62001571 Chenopodium quinoa HOM05D002678 ORTHO05D002920 8.4e-08 60.8 105 37.1
Lsat_1_v5_gn_6_26380 Lactuca sativa HOM05D002678 ORTHO05D002920 8.4e-08 60.8 102 38.2
Prupe.6G246400 Prunus persica HOM05D002678 ORTHO05D002920 8.4e-08 60.8 99 35.4
AUR62020213 Chenopodium quinoa HOM05D002678 ORTHO05D002920 1.1e-07 60.5 87 40.2
ECA248G3075 Erigeron canadensis HOM05D002678 ORTHO05D002920 1.1e-07 60.5 102 34.3
Gohir.D01G207900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.1e-07 60.5 102 40.2
HanXRQChr04g0110311 Helianthus annuus HOM05D002678 ORTHO05D002920 1.1e-07 60.5 86 36.0
Glyma.10G046800 Glycine max HOM05D002678 ORTHO05D002920 1.4e-07 60.1 103 35.9
vmacro03134 Vaccinium macrocarpon HOM05D002678 ORTHO05D002920 1.4e-07 60.1 67 46.3
FvH4_6g14750 Fragaria vesca HOM05D002678 ORTHO05D002920 1.9e-07 59.7 85 37.6
FAN05G1053 Fragaria x ananassa HOM05D002678 ORTHO05D002920 1.9e-07 59.7 85 37.6
FAN09G4043 Fragaria x ananassa HOM05D002678 ORTHO05D002920 1.9e-07 59.7 85 37.6
FAN14G4174 Fragaria x ananassa HOM05D002678 ORTHO05D002920 1.9e-07 59.7 85 37.6
Gohir.A04G078100 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.9e-07 59.7 80 42.5
Gohir.A08G000129 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.9e-07 59.7 100 34.0
Duzib106G2004 Durio zibethinus HOM05D002678 ORTHO05D002920 2.4e-07 59.3 114 38.6
Duzib150G0336 Durio zibethinus HOM05D002678 ORTHO05D002920 2.4e-07 59.3 97 38.1
FAN02G3512 Fragaria x ananassa HOM05D002678 ORTHO05D002920 2.4e-07 59.3 85 37.6
Gohir.D04G117300 Gossypium hirsutum HOM05D002678 ORTHO05D002920 2.4e-07 59.3 80 42.5
Lj1C177T9 Lonicera japonica HOM05D002678 ORTHO05D002920 2.4e-07 59.3 102 36.3
Phvul.001G172100 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 2.4e-07 59.3 87 40.2
QL07p046064 Quercus lobata HOM05D002678 ORTHO05D002920 2.4e-07 59.3 119 33.6
VMungo1383G3255 Vigna mungo HOM05D002678 ORTHO05D002920 2.4e-07 59.3 77 40.3
CDE09G0663 Ceratophyllum demersum HOM05D002619 ORTHO05D002920 3.2e-07 58.9 89 38.2
Gohir.D08G009900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 3.2e-07 58.9 100 34.0
Gorai.004G003100 Gossypium raimondii HOM05D002678 ORTHO05D002920 3.2e-07 58.9 100 34.0
Thecc.05G048400 Theobroma cacao HOM05D002678 ORTHO05D002920 3.2e-07 58.9 102 38.2
CiPaw.09G186200 Carya illinoinensis HOM05D002678 ORTHO05D002920 4.2e-07 58.5 103 37.9
Hma1.2p1_0746F.1_g212310 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 4.2e-07 58.5 68 42.6
Manes.08G073300 Manihot esculenta HOM05D002678 ORTHO05D002920 4.2e-07 58.5 108 35.2
Cfa017459 Carpinus fangiana HOM05D002678 ORTHO05D002920 5.5e-07 58.2 79 39.2
Glyma.13G134700 Glycine max HOM05D002678 ORTHO05D002920 5.5e-07 58.2 93 36.6
Lj5g0022817 Lotus japonicus HOM05D002678 ORTHO05D002920 5.5e-07 58.2 86 40.7
TWI75G0718 Tripterygium wilfordii HOM05D002678 ORTHO05D002920 5.5e-07 58.2 83 39.8
Gorai.009G422300 Gossypium raimondii HOM05D002678 ORTHO05D002920 7.1e-07 57.8 77 42.9
Hma1.2p1_0035F.1_g021820 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 7.1e-07 57.8 83 38.6
Lsat_1_v5_gn_5_167180 Lactuca sativa HOM05D002678 ORTHO05D002920 7.1e-07 57.8 82 36.6
MD04G1116500 Malus domestica HOM05D002678 ORTHO05D002920 7.1e-07 57.8 88 38.6
Medtr1g067350 Medicago truncatula HOM05D002678 ORTHO05D002920 7.1e-07 57.8 102 36.3
Nitab4.5_0000270g0250 Nicotiana tabacum HOM05D002678 ORTHO05D002920 9.3e-07 57.4 86 36.0
Thecc.09G330900 Theobroma cacao HOM05D002678 ORTHO05D002920 9.3e-07 57.4 92 39.1
MD12G1132300 Malus domestica HOM05D002678 ORTHO05D002920 1.2e-06 57.0 101 34.7
Sc01g0003810 Simmondsia chinensis HOM05D002678 ORTHO05D002920 1.2e-06 57.0 105 36.2
Cc01_g12070 Coffea canephora HOM05D002678 ORTHO05D002920 1.6e-06 56.6 108 31.5
COL.COLO4_07093 Corchorus olitorius HOM05D002678 ORTHO05D002920 1.6e-06 56.6 103 36.9
HanXRQChr14g0429171 Helianthus annuus HOM05D002678 ORTHO05D002920 1.6e-06 56.6 110 32.7
DCAR_017751 Daucus carota HOM05D002678 ORTHO05D002920 2.1e-06 56.2 105 35.2
Gohir.A09G160000 Gossypium hirsutum HOM05D002678 ORTHO05D002920 2.1e-06 56.2 93 39.8
Gorai.006G177000 Gossypium raimondii HOM05D002678 ORTHO05D002920 2.1e-06 56.2 93 39.8
Potri.006G215000 Populus trichocarpa HOM05D002678 ORTHO05D002920 2.1e-06 56.2 112 34.8
HPP92_006589 Vanilla planifolia HOM05D002678 ORTHO05D002920 2.1e-06 56.2 82 37.8
Duzib093G0125 Durio zibethinus HOM05D002678 ORTHO05D002920 2.7e-06 55.8 85 40.0
Rhsim08G0110600 Rhododendron simsii HOM05D002678 ORTHO05D002920 2.7e-06 55.8 102 44.1
VMungo0720G1849 Vigna mungo HOM05D002678 ORTHO05D002920 2.7e-06 55.8 92 38.0
arahy.Tifrunner.gnm1.ann1.2B715G Arachis hypogaea HOM05D002678 ORTHO05D002920 3.5e-06 55.5 108 31.5
arahy.Tifrunner.gnm1.ann1.FZ8WY7 Arachis hypogaea HOM05D002678 ORTHO05D002920 3.5e-06 55.5 108 31.5
Phvul.004G085094 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 3.5e-06 55.5 107 35.5
Phvul.L002927 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 3.5e-06 55.5 107 35.5
Sabra16G0089400 Salix brachista HOM05D002678 ORTHO05D002920 3.5e-06 55.5 79 38.0
CiPaw.13G102100 Carya illinoinensis HOM05D002678 ORTHO05D002920 4.6e-06 55.1 102 33.3
Haze_20701 Corylus avellana HOM05D002678 ORTHO05D002920 4.6e-06 55.1 100 34.0
Eucgr.H01927 Eucalyptus grandis HOM05D002678 ORTHO05D002920 4.6e-06 55.1 138 34.8
Oeu058517.1 Olea europaea HOM05D002678 ORTHO05D002920 4.6e-06 55.1 80 37.5
SalBow3G1187 Salvia bowleyana HOM05D002678 ORTHO05D002920 4.6e-06 55.1 74 41.9
Solyc11g072890.1 Solanum lycopersicum HOM05D002678 ORTHO05D002920 4.6e-06 55.1 98 34.7
Nitab4.5_0000182g0070 Nicotiana tabacum HOM05D002678 ORTHO05D002920 6.0e-06 54.7 87 35.6
PGSC0003DMG400015526 Solanum tuberosum HOM05D002678 ORTHO05D002920 6.0e-06 54.7 104 35.6
DCAR_018868 Daucus carota HOM05D002678 ORTHO05D002920 7.9e-06 54.3 100 33.0
Migut.N02647 Erythranthe guttata HOM05D002678 ORTHO05D002920 7.9e-06 54.3 83 37.3
Gohir.D09G155600 Gossypium hirsutum HOM05D002678 ORTHO05D002920 7.9e-06 54.3 93 38.7
PGR004G2176 Punica granatum HOM05D002678 ORTHO05D002920 7.9e-06 54.3 83 34.9


User provided reference genes

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