Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 3.2e-81 305.1 157 100.0
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.6e-61 239.6 157 76.4
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 8.5e-58 227.3 157 72.6
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 2.3e-55 219.2 157 70.1
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 3.0e-55 218.8 158 70.3
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 1.5e-54 216.5 150 68.7
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 3.3e-54 215.3 157 68.2
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 5.7e-54 214.5 151 71.5
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 1.3e-53 213.4 154 68.2
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 3.7e-53 211.8 149 69.8
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 4.8e-53 211.5 156 70.5
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 8.2e-53 210.7 158 69.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 1.4e-52 209.9 158 65.8
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 2.4e-52 209.1 155 69.7
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 2.4e-52 209.1 152 69.1
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 4.1e-52 208.4 153 68.0
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 4.1e-52 208.4 149 69.8
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 5.3e-52 208.0 155 67.1
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 6.9e-52 207.6 156 67.9
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 6.9e-52 207.6 150 67.3
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 9.1e-52 207.2 156 67.9
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 1.5e-51 206.5 155 65.8
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.5e-51 206.5 155 66.5
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.0e-51 206.1 136 75.0
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 4.5e-51 204.9 135 70.4
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 4.5e-51 204.9 155 66.5
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 5.9e-51 204.5 155 65.2
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 2.2e-50 202.6 158 69.0
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 2.2e-50 202.6 152 67.1
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 6.5e-50 201.1 134 69.4
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 6.5e-50 201.1 155 64.5
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 8.5e-50 200.7 132 72.7
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 4.2e-49 198.4 131 75.6
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 5.5e-49 198.0 153 69.9
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 1.2e-48 196.8 157 64.3
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 1.6e-48 196.4 157 64.3
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 2.1e-48 196.1 130 77.7
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 3.6e-48 195.3 139 69.1
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 4.6e-48 194.9 155 67.7
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.6e-48 194.9 121 76.0
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 4.6e-48 194.9 147 66.7
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 4.6e-48 194.9 132 72.7
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.0e-47 193.7 156 62.8
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 1.0e-47 193.7 166 62.0
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 1.0e-47 193.7 155 63.2
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.0e-47 193.7 157 61.1
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 1.4e-47 193.4 155 68.4
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 1.4e-47 193.4 137 67.9
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 2.3e-47 192.6 132 75.0
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 3.0e-47 192.2 121 75.2
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 3.9e-47 191.8 132 73.5
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 5.1e-47 191.4 151 67.5
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 6.7e-47 191.0 155 64.5
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 6.7e-47 191.0 129 72.1
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 8.8e-47 190.7 155 65.2
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.1e-46 190.3 157 63.7
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 1.5e-46 189.9 128 72.7
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.5e-46 189.9 123 78.0
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 2.0e-46 189.5 144 62.5
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 2.0e-46 189.5 151 65.6
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 2.6e-46 189.1 152 65.1
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 3.3e-46 188.7 155 63.9
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 3.3e-46 188.7 123 76.4
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 3.3e-46 188.7 154 63.6
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 4.4e-46 188.3 153 60.8
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 9.7e-46 187.2 155 63.2
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 9.7e-46 187.2 155 62.6
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 9.7e-46 187.2 125 72.8
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 9.7e-46 187.2 153 61.4
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.7e-45 186.4 156 62.8
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.7e-45 186.4 156 62.8
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 2.2e-45 186.0 121 71.9
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 1.8e-44 183.0 156 62.2
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 2.4e-44 182.6 158 60.1
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 4.1e-44 181.8 151 58.9
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 5.3e-44 181.4 156 61.5
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.2e-43 180.3 151 64.2
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 3.4e-43 178.7 123 74.8
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 1.0e-42 177.2 138 63.0
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 1.3e-42 176.8 151 62.9
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 5.0e-42 174.9 133 66.9
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 8.5e-42 174.1 151 61.6
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.1e-41 173.7 156 61.5
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.1e-41 173.7 122 70.5
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.4e-41 173.3 131 71.0
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 1.4e-41 173.3 151 60.3
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 1.9e-41 172.9 158 59.5
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 5.5e-41 171.4 155 59.4
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 7.2e-41 171.0 131 70.2
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 1.2e-40 170.2 145 60.7
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 1.6e-40 169.9 157 59.2
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 6.1e-40 167.9 127 66.1
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 6.1e-40 167.9 149 57.0
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 2.3e-39 166.0 145 58.6
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 2.3e-39 166.0 118 69.5
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 3.0e-39 165.6 123 66.7
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 5.2e-39 164.9 126 65.1
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 7.4e-38 161.0 132 62.1
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 1.1e-36 157.1 157 54.8
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 7.0e-36 154.5 149 54.4
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 1.2e-35 153.7 151 56.3
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 3.5e-35 152.1 125 61.6
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 5.9e-35 151.4 146 55.5
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 1.0e-34 150.6 115 66.1
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 1.3e-34 150.2 144 55.6
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 5.5e-33 144.8 123 58.5
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 4.4e-30 135.2 154 48.7
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 2.2e-29 132.9 154 48.1
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 7.7e-27 124.4 103 62.1
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 1.7e-26 123.2 121 51.2
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 2.2e-26 122.9 138 50.0
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 4.2e-25 118.6 92 65.2
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 3.4e-22 109.0 131 45.8
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 2.8e-21 105.9 119 49.6
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 8.3e-21 104.4 118 47.5
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 2.3e-18 96.3 140 42.9
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 8.6e-18 94.4 114 43.9
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 2.5e-17 92.8 77 54.5
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 4.2e-17 92.0 94 57.4
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 4.7e-16 88.6 97 48.5
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 1.2e-14 84.0 144 36.1
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 2.8e-13 79.3 119 39.5
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 4.5e-11 72.0 84 52.4
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 7.3e-09 64.7 116 39.7


User provided reference genes

Program Settings