Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 5.2e-77 291.2 170 100.0
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 2.5e-23 112.8 172 45.9
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 1.1e-21 107.5 155 48.4
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 1.4e-21 107.1 176 52.3
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 1.5e-20 103.6 154 50.0
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 7.1e-18 94.7 154 47.4
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 6.0e-17 91.7 176 49.4
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 1.0e-16 90.9 174 42.5
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 3.9e-16 89.0 171 45.0
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 2.5e-15 86.3 153 49.0
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 9.6e-15 84.3 166 42.2
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 9.6e-15 84.3 159 49.7
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 2.1e-14 83.2 152 48.0
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 3.6e-14 82.4 167 43.1
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 6.2e-14 81.6 171 42.7
Nitab4.5_0000142g0280 Nicotiana tabacum HOM05D007502 ORTHO05D010230 6.2e-14 81.6 179 42.5
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 1.4e-13 80.5 144 41.0
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 1.4e-13 80.5 148 44.6
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 1.8e-13 80.1 153 38.6
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 2.4e-13 79.7 176 41.5
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 3.1e-13 79.3 168 39.9
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 6.9e-13 78.2 134 46.3
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 1.2e-12 77.4 163 47.2
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 2.0e-12 76.6 160 45.6
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 3.4e-12 75.9 150 40.7
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 1.3e-11 73.9 158 44.9
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 1.7e-11 73.6 111 47.7
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 3.8e-11 72.4 158 37.3
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 6.4e-11 71.6 164 37.2
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 8.4e-11 71.2 159 46.5
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 3.2e-10 69.3 166 36.7
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 3.2e-10 69.3 166 36.7
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 4.2e-10 68.9 132 46.2
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 4.2e-10 68.9 152 40.1
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 7.1e-10 68.2 161 36.6
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 7.1e-10 68.2 151 37.1
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 1.6e-09 67.0 174 41.4
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 2.7e-09 66.2 152 36.8
ATR0739G061 Amborella trichopoda HOM05D007502 ORTHO05D010230 4.6e-09 65.5 102 46.1
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 4.6e-09 65.5 129 40.3
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 4.6e-09 65.5 136 41.2
VMungo1215G1334 Vigna mungo HOM05D007502 ORTHO05D010230 4.6e-09 65.5 183 32.8
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 6.0e-09 65.1 173 32.9
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 1.3e-08 63.9 175 33.7
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 1.8e-08 63.5 167 35.9
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 2.3e-08 63.2 156 38.5
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 3.0e-08 62.8 104 45.2
Sabra07G0004300 Salix brachista HOM05D007502 ORTHO05D010230 5.1e-08 62.0 177 38.4
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 1.9e-07 60.1 117 38.5
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 2.5e-07 59.7 127 39.4
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 3.3e-07 59.3 161 39.8
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 5.6e-07 58.5 172 34.9
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 2.1e-06 56.6 191 33.5
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 2.1e-06 56.6 182 36.8
Ca_24677_v3 Cicer arietinum L. HOM05D007502 ORTHO05D010230 3.7e-06 55.8 130 34.6


User provided reference genes

Program Settings