Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 5.5e-101 370.9 183 100.0
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 7.8e-63 244.2 133 88.7
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 5.0e-62 241.5 133 88.7
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 1.9e-61 239.6 133 88.0
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 5.6e-61 238.0 133 87.2
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.2e-60 236.9 133 86.5
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 2.1e-60 236.1 132 86.4
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 3.6e-60 235.3 134 85.8
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 6.2e-60 234.6 133 85.7
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 6.2e-60 234.6 133 87.2
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.1e-59 233.8 133 85.7
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 1.1e-59 233.8 132 87.1
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 1.4e-59 233.4 133 83.5
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 2.3e-59 232.6 133 82.0
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 2.3e-59 232.6 133 84.2
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 2.3e-59 232.6 131 86.3
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 2.3e-59 232.6 130 86.2
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 4.0e-59 231.9 133 83.5
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 6.8e-59 231.1 131 84.7
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 2.0e-58 229.6 133 82.7
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 2.0e-58 229.6 133 82.7
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 2.0e-58 229.6 133 82.7
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 2.0e-58 229.6 133 83.5
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 2.6e-58 229.2 133 84.2
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 7.5e-58 227.6 133 82.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 1.7e-57 226.5 133 81.2
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.7e-57 226.5 134 85.1
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 1.7e-57 226.5 127 83.5
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 3.7e-57 225.3 133 80.5
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 3.7e-57 225.3 133 82.7
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 6.4e-57 224.6 133 81.2
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 8.3e-57 224.2 133 79.7
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 1.1e-56 223.8 133 79.7
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 1.4e-56 223.4 140 80.0
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 2.4e-56 222.6 133 79.7
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 4.1e-56 221.9 133 78.9
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.6e-55 219.9 133 80.5
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.1e-55 219.5 133 81.2
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 6.0e-55 218.0 133 80.5
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 6.0e-55 218.0 133 77.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 2.3e-54 216.1 130 79.2
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 6.6e-54 214.5 133 77.4
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 8.6e-54 214.2 133 76.7
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 2.5e-53 212.6 133 75.9
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 5.6e-53 211.5 113 89.4
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 1.2e-52 210.3 139 77.0
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 2.1e-52 209.5 133 74.4
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.1e-51 207.2 133 74.4
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 1.2e-50 203.8 128 74.2
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 4.4e-50 201.8 133 72.2
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 4.4e-50 201.8 181 60.8
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 5.8e-50 201.4 116 84.5
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 5.8e-50 201.4 200 55.0
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 7.6e-50 201.1 133 71.4
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 1.3e-49 200.3 133 72.2
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 1.3e-49 200.3 133 71.4
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 2.2e-49 199.5 133 70.7
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 3.8e-49 198.7 115 81.7
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 3.8e-49 198.7 133 70.7
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 4.9e-49 198.4 133 72.2
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 4.9e-49 198.4 114 82.5
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 6.4e-49 198.0 176 61.9
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 1.1e-48 197.2 133 69.9
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 7.1e-48 194.5 133 69.9
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.2e-47 193.7 133 69.9
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.1e-47 193.0 133 70.7
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 6.0e-47 191.4 133 69.9
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 6.0e-47 191.4 133 67.7
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 2.3e-46 189.5 133 67.7
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 1.9e-45 186.4 158 61.4
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 4.3e-45 185.3 114 77.2
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 4.3e-45 185.3 118 75.4
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 1.8e-43 179.9 128 68.0
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 7.6e-42 174.5 136 61.8
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 1.7e-41 173.3 105 79.0
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 2.2e-41 172.9 105 77.1
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 6.4e-41 171.4 99 82.8
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 8.4e-41 171.0 98 82.7
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 8.4e-41 171.0 128 63.3
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 5.4e-40 168.3 105 74.3
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 5.4e-40 168.3 103 76.7
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.1e-39 166.4 105 77.1
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 2.1e-39 166.4 98 80.6
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.0e-38 164.1 126 60.3
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 9.6e-37 157.5 92 79.3
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 8.4e-33 144.4 133 63.2
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 2.1e-31 139.8 133 59.4
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 5.1e-30 135.2 122 52.5
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 8.1e-28 127.9 110 50.9
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 2.9e-25 119.4 70 82.9
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 7.1e-24 114.8 111 51.4
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.9e-21 106.7 157 39.5
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 1.9e-21 106.7 62 83.9
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 2.5e-21 106.3 102 50.0
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 2.4e-19 99.8 130 40.0
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 4.0e-19 99.0 67 71.6
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 2.0e-18 96.7 109 46.8
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 6.3e-12 75.1 68 54.4
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 3.1e-11 72.8 83 42.2
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 7.7e-10 68.2 47 59.6
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 1.1e-08 64.3 89 38.2
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 5.5e-08 62.0 35 82.9
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 9.4e-08 61.2 36 72.2
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.4e-06 57.4 34 61.8


User provided reference genes

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