Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 4.9e-45 184.1 94 100.0
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 4.8e-40 167.5 92 90.2
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.7e-37 159.1 94 84.0
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 2.2e-37 158.7 93 82.8
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 2.9e-37 158.3 94 83.0
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 4.9e-37 157.5 92 83.7
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 6.4e-37 157.1 90 84.4
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.4e-37 157.1 86 88.4
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 8.4e-37 156.8 92 84.8
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 1.1e-36 156.4 90 84.4
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 3.2e-36 154.8 92 82.6
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 3.2e-36 154.8 92 83.7
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 4.2e-36 154.5 92 82.6
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 9.3e-36 153.3 93 81.7
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.2e-35 152.9 92 80.4
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.2e-35 152.9 92 80.4
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.6e-35 152.5 94 81.9
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.6e-35 152.5 93 79.6
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 2.1e-35 152.1 93 80.6
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 2.7e-35 151.8 87 85.1
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 3.5e-35 151.4 86 83.7
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 4.6e-35 151.0 94 79.8
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 4.6e-35 151.0 93 81.7
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 6.0e-35 150.6 94 81.9
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 7.9e-35 150.2 94 80.9
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 7.9e-35 150.2 92 79.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 1.0e-34 149.8 92 79.3
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.3e-34 149.4 92 78.3
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.8e-34 149.1 94 79.8
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 2.3e-34 148.7 83 86.7
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.3e-34 148.7 93 80.6
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 2.3e-34 148.7 89 83.1
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.9e-34 147.9 84 84.5
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.9e-34 147.9 84 84.5
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 3.9e-34 147.9 88 81.8
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 5.1e-34 147.5 93 77.4
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 8.7e-34 146.7 92 80.4
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 8.7e-34 146.7 94 78.7
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 8.7e-34 146.7 92 77.2
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 8.7e-34 146.7 92 77.2
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 8.7e-34 146.7 83 85.5
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 1.1e-33 146.4 87 83.9
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.9e-33 145.6 87 82.8
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 3.3e-33 144.8 92 78.3
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 4.3e-33 144.4 92 76.1
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 4.3e-33 144.4 82 82.9
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 5.6e-33 144.1 86 82.6
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 7.4e-33 143.7 92 79.3
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 9.6e-33 143.3 77 84.4
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 9.6e-33 143.3 92 77.2
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 1.3e-32 142.9 82 78.0
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.3e-32 142.9 92 76.1
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 2.1e-32 142.1 85 81.2
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 2.1e-32 142.1 82 84.1
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 2.1e-32 142.1 87 78.2
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.8e-32 141.7 84 79.8
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 3.7e-32 141.4 87 79.3
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.7e-32 141.4 92 75.0
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 3.7e-32 141.4 89 82.0
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 3.7e-32 141.4 82 80.5
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 8.1e-32 140.2 107 69.2
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 8.1e-32 140.2 82 80.5
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.1e-31 139.8 112 67.0
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.4e-31 139.4 79 84.8
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.4e-31 139.4 118 64.4
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.4e-31 138.7 76 85.5
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.4e-31 138.7 100 71.0
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 2.4e-31 138.7 76 88.2
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 2.4e-31 138.7 76 88.2
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 3.1e-31 138.3 82 80.5
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.0e-31 137.9 92 70.7
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.0e-31 137.9 92 70.7
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 5.3e-31 137.5 92 70.7
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 6.9e-31 137.1 83 77.1
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 6.9e-31 137.1 95 68.4
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.5e-30 136.0 91 72.5
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.5e-30 136.0 72 87.5
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.5e-30 136.0 76 85.5
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.5e-30 136.0 87 74.7
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.6e-30 135.2 82 78.0
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 4.5e-30 134.4 76 85.5
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 5.8e-30 134.0 96 71.9
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 7.6e-30 133.7 76 80.3
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.3e-29 132.9 90 73.3
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-29 132.5 93 72.0
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 1.7e-29 132.5 93 72.0
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 1.7e-29 132.5 93 72.0
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 2.2e-29 132.1 92 66.3
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.9e-29 131.7 86 77.9
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 3.8e-29 131.3 82 75.6
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.8e-29 131.3 76 82.9
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 8.4e-29 130.2 78 82.1
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 8.4e-29 130.2 95 68.4
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 8.4e-29 130.2 88 75.0
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-28 129.4 85 70.6
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 1.4e-28 129.4 81 76.5
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.9e-28 129.0 79 79.7
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 3.2e-28 128.3 83 73.5
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 4.2e-28 127.9 83 73.5
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 4.2e-28 127.9 83 73.5
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 4.2e-28 127.9 83 73.5
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 4.2e-28 127.9 83 73.5
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 9.3e-28 126.7 81 76.5
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.2e-27 126.3 75 76.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.2e-27 126.3 83 72.3
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.2e-27 126.3 84 79.8
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 3.5e-27 124.8 91 68.1
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 3.5e-27 124.8 83 69.9
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 6.0e-27 124.0 80 80.0
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 6.0e-27 124.0 82 73.2
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 7.9e-27 123.6 88 71.6
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-26 122.9 82 72.0
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 3.0e-26 121.7 75 80.0
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 6.7e-26 120.6 81 76.5
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 3.7e-24 114.8 61 86.9
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.8e-23 112.5 79 70.9
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 5.3e-23 110.9 64 79.7
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.1e-20 103.2 76 68.4
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 9.3e-20 100.1 91 57.1
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 1.6e-19 99.4 88 61.4
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 2.7e-19 98.6 88 62.5
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 8.2e-16 87.0 84 50.0
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 3.1e-15 85.1 63 68.3
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 9.0e-15 83.6 60 66.7
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 1.5e-14 82.8 44 86.4
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 5.9e-14 80.9 63 57.1
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 6.1e-11 70.9 62 58.1
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 7.9e-11 70.5 57 59.6
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 58.3
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 58.3
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 58.3
Pp3c3_450 Physcomitrium patens HOM05D005828 ORTHO05D006822 4.5e-06 54.7 90 37.8


User provided reference genes

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