Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1295 Trochodendron aralioides HOM05D002332 ORTHO05D002509 1.6e-46 189.1 97 100.0
GSVIVG01009478001 Vitis vinifera HOM05D002332 ORTHO05D002509 1.2e-14 83.2 68 67.6
Dinv39304 Davidia involucrata HOM05D002332 ORTHO05D002509 1.6e-14 82.8 68 66.2
Dinv35945 Davidia involucrata HOM05D002332 ORTHO05D002509 6.0e-14 80.9 68 63.2
Actinidia23289 Actinidia chinensis HOM05D002332 ORTHO05D002509 7.9e-14 80.5 68 63.2
Thecc.08G005100 Theobroma cacao HOM05D002332 ORTHO05D002509 1.0e-13 80.1 68 64.7
Duzib093G1319 Durio zibethinus HOM05D002332 ORTHO05D002509 1.3e-13 79.7 68 63.2
CiPaw.05G179300 Carya illinoinensis HOM05D002332 ORTHO05D002509 2.3e-13 79.0 68 61.8
CiPaw.16G042300 Carya illinoinensis HOM05D002332 ORTHO05D002509 5.1e-13 77.8 68 61.8
Haze_18030 Corylus avellana HOM05D002332 ORTHO05D002509 5.1e-13 77.8 68 63.2
Nn4g24734 Nelumbo nucifera HOM05D002332 ORTHO05D002509 5.1e-13 77.8 68 66.2
TAR625G1294 Trochodendron aralioides HOM05D002332 ORTHO05D002509 5.1e-13 77.8 68 63.2
Cfa018082 Carpinus fangiana HOM05D002332 ORTHO05D002509 8.7e-13 77.0 68 61.8
Atru.chr13.711 Acer truncatum HOM05D002332 ORTHO05D002509 1.5e-12 76.3 68 61.8
Lj4A60G15 Lonicera japonica HOM05D002332 ORTHO05D002509 2.5e-12 75.5 68 60.3
Oeu012425.1 Olea europaea HOM05D002332 ORTHO05D002509 3.3e-12 75.1 68 58.8
Nn1g04830 Nelumbo nucifera HOM05D002332 ORTHO05D002509 5.7e-12 74.3 68 60.3
COL.COLO4_26530 Corchorus olitorius HOM05D002332 ORTHO05D002509 7.4e-12 73.9 68 60.3
QL02p004496 Quercus lobata HOM05D002332 ORTHO05D002509 7.4e-12 73.9 68 60.3
QL06p048778 Quercus lobata HOM05D002332 ORTHO05D002509 7.4e-12 73.9 68 60.3
Cc10_g04520 Coffea canephora HOM05D002332 ORTHO05D002509 9.7e-12 73.6 68 57.4
Phvul.008G025800 Phaseolus vulgaris HOM05D002332 ORTHO05D002509 1.3e-11 73.2 68 60.3
Lj1g0004747 Lotus japonicus HOM05D002332 ORTHO05D002509 2.2e-11 72.4 68 58.8
SGA_v2.0_scaffold62G21510 Striga asiatica HOM05D002332 ORTHO05D002509 2.2e-11 72.4 68 55.9
MBI08_g39927_MAGBIO Magnolia biondii HOM05D002332 ORTHO05D002509 2.8e-11 72.0 68 58.8
Gohir.D06G017700 Gossypium hirsutum HOM05D002332 ORTHO05D002509 4.8e-11 71.2 68 55.9
Phvul.005G174300 Phaseolus vulgaris HOM05D002332 ORTHO05D002509 6.3e-11 70.9 68 58.8
SalBow7G2328 Salvia bowleyana HOM05D002332 ORTHO05D002509 6.3e-11 70.9 68 55.9
DCAR_011828 Daucus carota HOM05D002332 ORTHO05D002509 8.2e-11 70.5 68 54.4
Lj5g0014115 Lotus japonicus HOM05D002332 ORTHO05D002509 1.1e-10 70.1 68 57.4
Sc02g0007250 Simmondsia chinensis HOM05D002332 ORTHO05D002509 1.1e-10 70.1 68 54.4
TWI36G1206 Tripterygium wilfordii HOM05D002332 ORTHO05D002509 1.1e-10 70.1 68 54.4
Ciclev10001126m.g Citrus clementina HOM05D002332 ORTHO05D002509 1.4e-10 69.7 68 63.2
Glyma.18G275100 Glycine max HOM05D002332 ORTHO05D002509 1.4e-10 69.7 68 57.4
Gorai.010G020600 Gossypium raimondii HOM05D002332 ORTHO05D002509 1.4e-10 69.7 68 54.4
Prupe.1G433800 Prunus persica HOM05D002332 ORTHO05D002509 1.4e-10 69.7 68 52.9
MSTRG.25068 Avicennia marina HOM05D002332 ORTHO05D002509 1.8e-10 69.3 68 55.9
Cpa.g.sc65.26 Carica papaya HOM05D002332 ORTHO05D002509 1.8e-10 69.3 68 54.4
ECA246G3545 Erigeron canadensis HOM05D002332 ORTHO05D002509 1.8e-10 69.3 68 52.9
Gohir.A06G019300 Gossypium hirsutum HOM05D002332 ORTHO05D002509 1.8e-10 69.3 68 54.4
Phvul.005G107100 Phaseolus vulgaris HOM05D002332 ORTHO05D002509 1.8e-10 69.3 68 57.4
Aqoxy6G00898 Aquilegia oxysepala HOM05D002332 ORTHO05D002509 2.4e-10 68.9 68 54.4
Glyma.08G252500 Glycine max HOM05D002332 ORTHO05D002509 4.1e-10 68.2 68 55.9
Lalb_Chr17g0336781 Lupinus albus HOM05D002332 ORTHO05D002509 4.1e-10 68.2 68 57.4
MD15G1081000 Malus domestica HOM05D002332 ORTHO05D002509 4.1e-10 68.2 68 52.9
Medtr1g034785 Medicago truncatula HOM05D002332 ORTHO05D002509 4.1e-10 68.2 69 60.9
Peaxi162Scf00458g00325 Petunia axillaris HOM05D002332 ORTHO05D002509 5.3e-10 67.8 68 54.4
Potri.014G027200 Populus trichocarpa HOM05D002332 ORTHO05D002509 5.3e-10 67.8 71 52.1
TPR.G40412 Trifolium pratense HOM05D002332 ORTHO05D002509 5.3e-10 67.8 69 59.4
Eucgr.F02332 Eucalyptus grandis HOM05D002332 ORTHO05D002509 6.9e-10 67.4 68 52.9
Hma1.2p1_0360F.1_g135610 Hydrangea macrophylla HOM05D002332 ORTHO05D002509 6.9e-10 67.4 85 50.6
Manes.18G038500 Manihot esculenta HOM05D002332 ORTHO05D002509 6.9e-10 67.4 68 54.4
SHI08262 Sapria himalayana HOM05D002332 ORTHO05D002509 9.0e-10 67.0 68 55.9
FAN20G1644 Fragaria x ananassa HOM05D002332 ORTHO05D002509 1.2e-09 66.6 68 51.5
VMungo1383G1987 Vigna mungo HOM05D002332 ORTHO05D002509 1.2e-09 66.6 68 55.9
Solyc04g078780.3 Solanum lycopersicum HOM05D002332 ORTHO05D002509 1.5e-09 66.2 68 52.9
PGSC0003DMG400007963 Solanum tuberosum HOM05D002332 ORTHO05D002509 1.5e-09 66.2 68 52.9
RcHm_v2.0_Chr6g0308111 Rosa chinensis HOM05D002332 ORTHO05D002509 2.0e-09 65.9 68 51.5
TPR.G22366 Trifolium pratense HOM05D002332 ORTHO05D002509 2.0e-09 65.9 69 56.5
Ca_12501_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 3.4e-09 65.1 68 57.4
Ca_25727_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 3.4e-09 65.1 68 57.4
Migut.C00568 Erythranthe guttata HOM05D002332 ORTHO05D002509 3.4e-09 65.1 68 51.5
FvH4_2g34270 Fragaria vesca HOM05D002332 ORTHO05D002509 3.4e-09 65.1 68 50.0
FAN15G0333 Fragaria x ananassa HOM05D002332 ORTHO05D002509 3.4e-09 65.1 68 50.0
FAN24G2812 Fragaria x ananassa HOM05D002332 ORTHO05D002509 3.4e-09 65.1 68 50.0
FAN27G1527 Fragaria x ananassa HOM05D002332 ORTHO05D002509 3.4e-09 65.1 68 50.0
Nitab4.5_0003677g0020 Nicotiana tabacum HOM05D002332 ORTHO05D002509 3.4e-09 65.1 68 50.0
Sabra14G0018600 Salix brachista HOM05D002332 ORTHO05D002509 4.5e-09 64.7 71 49.3
HanXRQChr16g0511391 Helianthus annuus HOM05D002332 ORTHO05D002509 5.9e-09 64.3 68 51.5
Sopen04g032380 Solanum pennellii HOM05D002332 ORTHO05D002509 7.6e-09 63.9 68 51.5
vmacro21505 Vaccinium macrocarpon HOM05D002332 ORTHO05D002509 1.0e-08 63.5 87 46.0
AUR62035333 Chenopodium quinoa HOM05D002332 ORTHO05D002509 1.3e-08 63.2 68 55.9
Nitab4.5_0000287g0170 Nicotiana tabacum HOM05D002332 ORTHO05D002509 1.3e-08 63.2 68 50.0
Lsat_1_v5_gn_6_115620 Lactuca sativa HOM05D002332 ORTHO05D002509 2.2e-08 62.4 72 50.0
ATR0021G051 Amborella trichopoda HOM05D002332 ORTHO05D002509 2.9e-08 62.0 68 52.9
Ah.13g075150 Amaranthus hybridus HOM05D002332 ORTHO05D002509 6.5e-08 60.8 69 52.2
Ah.13g071810 Amaranthus hybridus HOM05D002332 ORTHO05D002509 1.1e-07 60.1 68 54.4
ClCG05G019990 Citrullus lanatus HOM05D002332 ORTHO05D002509 3.2e-07 58.5 67 47.8
Lsat_1_v5_gn_8_164101 Lactuca sativa HOM05D002332 ORTHO05D002509 3.2e-07 58.5 70 50.0
Psat0s4552g0080 Pisum sativum HOM05D002332 ORTHO05D002509 4.2e-07 58.2 68 48.5
CDE05G3079 Ceratophyllum demersum HOM05D002332 ORTHO05D002509 5.5e-07 57.8 69 49.3
CsaV3_4G034460 Cucumis sativus L. HOM05D002332 ORTHO05D002509 5.5e-07 57.8 67 46.3
PSO541G3218 Papaver somniferum HOM05D002332 ORTHO05D002509 5.5e-07 57.8 69 46.4
PSO675G4923 Papaver somniferum HOM05D002332 ORTHO05D002509 5.5e-07 57.8 69 46.4
AUR62035906 Chenopodium quinoa HOM05D002332 ORTHO05D002509 9.3e-07 57.0 68 54.4
HPP92_010732 Vanilla planifolia HOM05D002332 ORTHO05D002509 9.3e-07 57.0 52 59.6
MELO3C016764.2 Cucumis melo HOM05D002332 ORTHO05D002509 1.6e-06 56.2 67 46.3
Sed0026906 Sechium edule HOM05D002332 ORTHO05D002509 2.1e-06 55.8 66 47.0
TPR.G23391 Trifolium pratense HOM05D002332 ORTHO05D002509 2.1e-06 55.8 68 48.5
Ca_06913_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 3.6e-06 55.1 68 48.5
Ca_13862_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 3.6e-06 55.1 68 48.5
PGR031G1323 Punica granatum HOM05D002332 ORTHO05D002509 7.9e-06 53.9 65 49.2


User provided reference genes

Program Settings