Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 2.5e-63 245.4 129 100.0
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 5.9e-33 144.4 129 62.8
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 3.2e-31 138.7 129 57.4
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 5.5e-31 137.9 132 59.1
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 9.5e-31 137.1 129 58.9
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 3.6e-30 135.2 144 56.2
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 6.1e-30 134.4 117 60.7
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.4e-29 133.3 117 60.7
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.0e-29 132.1 132 56.1
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 4.0e-29 131.7 130 57.7
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 4.0e-29 131.7 120 63.3
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 5.2e-29 131.3 130 58.5
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 5.2e-29 131.3 129 59.7
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 6.8e-29 131.0 130 58.5
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 1.2e-28 130.2 135 58.5
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.2e-28 130.2 129 55.0
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.5e-28 129.8 133 57.1
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 1.5e-28 129.8 131 57.3
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 2.0e-28 129.4 130 52.3
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 2.6e-28 129.0 129 55.8
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.6e-28 129.0 143 52.4
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.4e-28 128.6 130 52.3
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 4.4e-28 128.3 132 55.3
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 4.4e-28 128.3 129 54.3
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 5.7e-28 127.9 129 55.0
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.7e-27 126.3 130 56.9
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.7e-27 126.3 108 64.8
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 1.7e-27 126.3 142 53.5
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.7e-27 126.3 138 50.7
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 2.2e-27 125.9 92 69.6
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 3.7e-27 125.2 89 74.2
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 3.7e-27 125.2 133 57.1
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 4.9e-27 124.8 130 56.9
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 4.9e-27 124.8 130 56.2
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 6.3e-27 124.4 129 54.3
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.8e-26 122.9 129 53.5
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 3.1e-26 122.1 145 51.7
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 3.1e-26 122.1 129 50.4
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 4.1e-26 121.7 129 55.0
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 1.6e-25 119.8 98 67.3
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.6e-25 119.8 100 66.0
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 2.0e-25 119.4 130 55.4
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.7e-25 119.0 130 54.6
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 3.5e-25 118.6 91 67.0
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 3.5e-25 118.6 131 54.2
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 4.5e-25 118.2 130 54.6
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 4.5e-25 118.2 115 59.1
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 5.9e-25 117.9 129 55.0
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 7.8e-25 117.5 131 53.4
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.0e-24 117.1 109 58.7
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 1.3e-24 116.7 130 55.4
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 1.7e-24 116.3 130 55.4
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 2.3e-24 115.9 94 64.9
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 2.9e-24 115.5 125 53.6
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 2.9e-24 115.5 125 53.6
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 5.0e-24 114.8 111 58.6
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 6.6e-24 114.4 129 52.7
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 1.9e-23 112.8 129 45.7
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 1.9e-23 112.8 129 45.7
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.9e-23 112.8 130 50.8
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 3.3e-23 112.1 91 63.7
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 5.6e-23 111.3 90 64.4
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 1.6e-22 109.8 106 56.6
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 2.8e-22 109.0 90 62.2
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 4.7e-22 108.2 123 47.2
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 6.1e-22 107.8 73 71.2
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 8.0e-22 107.5 113 57.5
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 8.0e-22 107.5 93 62.4
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 1.4e-21 106.7 130 51.5
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 1.4e-21 106.7 109 57.8
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 1.8e-21 106.3 130 52.3
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 1.8e-21 106.3 130 52.3
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 3.0e-21 105.5 130 52.3
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 3.0e-21 105.5 92 63.0
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 6.8e-21 104.4 130 51.5
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 6.8e-21 104.4 173 39.9
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 8.9e-21 104.0 129 48.8
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 8.9e-21 104.0 101 56.4
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 2.0e-20 102.8 130 50.0
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-20 102.4 134 47.8
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 3.4e-20 102.1 132 47.0
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 2.2e-19 99.4 111 55.9
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 2.9e-19 99.0 60 76.7
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 3.7e-19 98.6 59 76.3
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 4.9e-19 98.2 91 58.2
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 7.0e-18 94.4 75 65.3
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 7.0e-18 94.4 68 70.6
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 2.0e-17 92.8 86 58.1
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 5.9e-17 91.3 159 42.8
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 1.7e-16 89.7 63 69.8
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 2.3e-16 89.4 92 56.5
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 3.3e-15 85.5 58 72.4
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 1.5e-12 76.6 105 41.9
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 7.5e-12 74.3 141 38.3
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 3.2e-10 68.9 46 71.7
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 2.3e-08 62.8 88 42.0
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 5.0e-08 61.6 92 43.5
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 6.2e-06 54.7 86 43.0


User provided reference genes

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