Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1269 Trochodendron aralioides HOM05D005311 ORTHO05D006160 3.5e-121 438.3 226 100.0
TAR376G1236 Trochodendron aralioides HOM05D000442 ORTHO05D006160 1.2e-92 343.6 217 80.2
TAR625G0307 Trochodendron aralioides HOM05D005311 ORTHO05D006160 6.8e-85 317.8 226 72.6
CiPaw.05G021200 Carya illinoinensis HOM05D005311 ORTHO05D006160 1.6e-70 270.0 226 63.7
GSVIVG01037044001 Vitis vinifera HOM05D005311 ORTHO05D006160 2.8e-70 269.2 227 67.4
CSS0009611 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 1.8e-69 266.5 227 66.1
Rhsim11G0150000 Rhododendron simsii HOM05D005311 ORTHO05D006160 6.4e-67 258.1 226 63.7
Aqoxy5G01939 Aquilegia oxysepala HOM05D005311 ORTHO05D006160 7.1e-66 254.6 217 62.7
Atru.chr5.2262 Acer truncatum HOM05D005311 ORTHO05D006160 9.3e-66 254.2 200 67.0
Actinidia00352 Actinidia chinensis HOM05D005311 ORTHO05D006160 4.6e-65 251.9 224 58.9
Ciclev10029272m.g Citrus clementina HOM05D005311 ORTHO05D006160 4.6e-65 251.9 177 70.1
Manes.07G056400 Manihot esculenta HOM05D005311 ORTHO05D006160 5.1e-64 248.4 229 61.6
TWI14G0308 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 8.7e-64 247.7 229 61.6
Actinidia02445 Actinidia chinensis HOM05D005311 ORTHO05D006160 4.3e-63 245.4 224 57.6
MD05G1106900 Malus domestica HOM05D005311 ORTHO05D006160 1.3e-62 243.8 228 59.6
MD10G1111900 Malus domestica HOM05D005311 ORTHO05D006160 2.8e-62 242.7 228 58.8
Thecc.02G120600 Theobroma cacao HOM05D005311 ORTHO05D006160 1.1e-61 240.7 226 59.3
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 6.9e-61 238.0 189 65.6
QL11p029204 Quercus lobata HOM05D005311 ORTHO05D006160 9.0e-61 237.7 244 55.3
COL.COLO4_32478 Corchorus olitorius HOM05D005311 ORTHO05D006160 1.5e-60 236.9 227 57.3
Phvul.007G047500 Phaseolus vulgaris HOM05D005311 ORTHO05D006160 1.5e-60 236.9 188 66.0
Sed0009957 Sechium edule HOM05D005311 ORTHO05D006160 3.4e-60 235.7 229 58.1
Duzib052G0370 Durio zibethinus HOM05D005311 ORTHO05D006160 4.5e-60 235.3 227 57.7
TWI59G0049 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 7.6e-60 234.6 222 59.5
Gohir.A03G180600 Gossypium hirsutum HOM05D005311 ORTHO05D006160 1.7e-59 233.4 226 57.5
Glyma.10G255200 Glycine max HOM05D005311 ORTHO05D006160 2.2e-59 233.0 188 65.4
MELO3C018026.2 Cucumis melo HOM05D005311 ORTHO05D006160 3.8e-59 232.3 227 59.0
Gohir.D02G203104 Gossypium hirsutum HOM05D005311 ORTHO05D006160 3.8e-59 232.3 226 57.5
Nn6g32054 Nelumbo nucifera HOM05D005311 ORTHO05D006160 4.9e-59 231.9 154 76.6
Potri.001G289400 Populus trichocarpa HOM05D005311 ORTHO05D006160 1.9e-58 229.9 196 64.3
Gohir.D12G019000 Gossypium hirsutum HOM05D005311 ORTHO05D006160 3.2e-58 229.2 189 62.4
Gorai.008G019300 Gossypium raimondii HOM05D005311 ORTHO05D006160 3.2e-58 229.2 189 62.4
Lalb_Chr21g0307981 Lupinus albus HOM05D005311 ORTHO05D006160 4.2e-58 228.8 226 58.0
FvH4_2g03130 Fragaria vesca HOM05D005311 ORTHO05D006160 9.3e-58 227.6 227 57.3
Medtr1g105970 Medicago truncatula HOM05D005311 ORTHO05D006160 1.2e-57 227.3 189 63.0
ECA240G0703 Erigeron canadensis HOM05D005311 ORTHO05D006160 1.6e-57 226.9 228 56.6
Gohir.A12G018400 Gossypium hirsutum HOM05D005311 ORTHO05D006160 1.6e-57 226.9 189 61.9
Potri.009G084800 Populus trichocarpa HOM05D005311 ORTHO05D006160 1.6e-57 226.9 228 57.9
Gorai.005G229500 Gossypium raimondii HOM05D005311 ORTHO05D006160 2.1e-57 226.5 226 56.2
Lsat_1_v5_gn_9_113920 Lactuca sativa HOM05D005311 ORTHO05D006160 3.5e-57 225.7 227 55.5
Solyc01g106790.3 Solanum lycopersicum HOM05D005311 ORTHO05D006160 7.9e-57 224.6 229 54.6
Sopen01g049100 Solanum pennellii HOM05D005311 ORTHO05D006160 1.0e-56 224.2 229 55.5
arahy.Tifrunner.gnm1.ann1.KVB0K0 Arachis hypogaea HOM05D005311 ORTHO05D006160 1.8e-56 223.4 237 54.4
Cc02_g20120 Coffea canephora HOM05D005311 ORTHO05D006160 1.8e-56 223.4 222 55.0
PSO210G6612 Papaver somniferum HOM05D005311 ORTHO05D006160 1.8e-56 223.4 229 58.1
CANSAT25G3378 Cannabis sativa HOM05D005311 ORTHO05D006160 3.9e-56 222.2 227 55.9
Sc18g0007330 Simmondsia chinensis HOM05D005311 ORTHO05D006160 5.1e-56 221.9 228 54.4
PGSC0003DMG400025735 Solanum tuberosum HOM05D005311 ORTHO05D006160 5.1e-56 221.9 229 55.0
ATR0767G087 Amborella trichopoda HOM05D005311 ORTHO05D006160 8.7e-56 221.1 228 56.6
MSTRG.16668 Avicennia marina HOM05D005311 ORTHO05D006160 1.5e-55 220.3 226 56.6
FAN24G0492 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.5e-55 220.3 231 55.8
Lalb_Chr02g0144871 Lupinus albus HOM05D005311 ORTHO05D006160 1.5e-55 220.3 226 57.5
TAR365G0893 Trochodendron aralioides HOM05D005311 ORTHO05D006160 1.5e-55 220.3 150 78.0
PSO447G0012 Papaver somniferum HOM05D005311 ORTHO05D006160 2.5e-55 219.5 229 57.2
Eucgr.I02500 Eucalyptus grandis HOM05D005311 ORTHO05D006160 4.3e-55 218.8 230 58.3
Glyma.20G136100 Glycine max HOM05D005311 ORTHO05D006160 4.3e-55 218.8 188 62.8
FAN27G0024 Fragaria x ananassa HOM05D005311 ORTHO05D006160 7.4e-55 218.0 231 55.0
Migut.B00474 Erythranthe guttata HOM05D005311 ORTHO05D006160 9.6e-55 217.6 202 59.4
Ca_11020_v3 Cicer arietinum L. HOM05D005311 ORTHO05D006160 1.6e-54 216.9 191 61.3
VMungo0720G0066 Vigna mungo HOM05D005311 ORTHO05D006160 2.1e-54 216.5 154 72.1
HanXRQChr15g0495651 Helianthus annuus HOM05D005311 ORTHO05D006160 3.7e-54 215.7 227 54.6
FAN20G1889 Fragaria x ananassa HOM05D005311 ORTHO05D006160 4.8e-54 215.3 231 54.5
Nitab4.5_0000772g0050 Nicotiana tabacum HOM05D005311 ORTHO05D006160 6.3e-54 214.9 230 55.2
SalBow6G1857 Salvia bowleyana HOM05D005311 ORTHO05D006160 1.1e-53 214.2 228 52.6
arahy.Tifrunner.gnm1.ann1.QK2693 Arachis hypogaea HOM05D005311 ORTHO05D006160 2.4e-53 213.0 158 67.7
Cpa.g.sc106.28 Carica papaya HOM05D005311 ORTHO05D006160 3.1e-53 212.6 276 46.4
Nitab4.5_0009103g0020 Nicotiana tabacum HOM05D005311 ORTHO05D006160 3.1e-53 212.6 230 54.8
SGA_v2.0_scaffold32G12981 Striga asiatica HOM05D005311 ORTHO05D006160 4.1e-53 212.2 200 56.0
Lsat_1_v5_gn_7_84560 Lactuca sativa HOM05D005311 ORTHO05D006160 6.9e-53 211.5 228 52.6
FAN15G1540 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.2e-52 210.7 223 54.7
CAN.G606.76 Capsicum annuum HOM05D005311 ORTHO05D006160 2.0e-52 209.9 230 52.6
ClCG10G010010 Citrullus lanatus HOM05D005311 ORTHO05D006160 4.5e-52 208.8 157 68.2
THA.LOC104815219 Tarenaya hassleriana HOM05D005311 ORTHO05D006160 4.5e-52 208.8 190 57.9
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 7.6e-52 208.0 154 66.2
RcHm_v2.0_Chr6g0248001 Rosa chinensis HOM05D005311 ORTHO05D006160 1.0e-51 207.6 255 50.6
Peaxi162Scf00016g03127 Petunia axillaris HOM05D005311 ORTHO05D006160 1.7e-51 206.8 226 53.1
Lj5g0014269 Lotus japonicus HOM05D005311 ORTHO05D006160 2.2e-51 206.5 169 60.9
vmacro01940 Vaccinium macrocarpon HOM05D000211 ORTHO05D002517 2.9e-51 206.1 181 63.0
Lalb_Chr16g0376301 Lupinus albus HOM05D005311 ORTHO05D006160 3.8e-51 205.7 169 63.3
Hund00418 Selenicereus undatus HOM05D005311 ORTHO05D006160 6.5e-51 204.9 219 55.7
CsaV3_4G000050 Cucumis sativus L. HOM05D005311 ORTHO05D006160 4.2e-50 202.2 154 67.5
Lj9A337G44 Lonicera japonica HOM05D005311 ORTHO05D006160 4.6e-49 198.7 155 66.5
DCAR_021939 Daucus carota HOM05D005311 ORTHO05D006160 1.0e-48 197.6 154 65.6
Thhalv10011774m.g Eutrema salsugineum HOM05D005311 ORTHO05D006160 1.3e-48 197.2 190 55.8
Sp1g36880 Schrenkiella parvula HOM05D005311 ORTHO05D006160 1.8e-48 196.8 191 57.6
AL1G57590 Arabidopsis lyrata HOM05D005311 ORTHO05D006160 6.7e-48 194.9 190 57.4
Prupe.8G151000 Prunus persica HOM05D005311 ORTHO05D006160 6.7e-48 194.9 183 61.7
ECA236G2995 Erigeron canadensis HOM05D000211 ORTHO05D002517 8.7e-48 194.5 172 58.7
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 1.5e-47 193.7 143 68.5
AT1G50020 Arabidopsis thaliana HOM05D005311 ORTHO05D006160 1.9e-47 193.4 164 62.8
AUR62030871 Chenopodium quinoa HOM05D005311 ORTHO05D006160 3.3e-47 192.6 229 52.0
Carub.0001s3920 Capsella rubella HOM05D005311 ORTHO05D006160 5.7e-47 191.8 190 55.3
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 1.6e-46 190.3 157 64.3
BolC3t21257H Brassica oleracea HOM05D005311 ORTHO05D006160 1.6e-46 190.3 193 56.0
Ah.01g024570 Amaranthus hybridus HOM05D005311 ORTHO05D006160 4.8e-46 188.7 182 59.3
A08p03390 Brassica napus HOM05D005311 ORTHO05D006160 8.2e-46 188.0 194 56.7
CARHR040130 Cardamine hirsuta HOM05D005311 ORTHO05D006160 1.1e-45 187.6 190 55.8
AUR62027028 Chenopodium quinoa HOM05D005311 ORTHO05D006160 1.1e-45 187.6 222 51.8
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 6.9e-45 184.9 213 48.8
C03p89430 Brassica napus HOM05D005311 ORTHO05D006160 9.0e-45 184.5 166 60.8
BraA08t32371Z Brassica rapa HOM05D005311 ORTHO05D006160 9.0e-45 184.5 194 54.6
GSVIVG01009264001 Vitis vinifera HOM05D005311 ORTHO05D006160 3.4e-44 182.6 204 51.5
BcaB07g33454 Brassica carinata HOM05D005311 ORTHO05D006160 2.9e-43 179.5 197 54.8
BcaC08g43180 Brassica carinata HOM05D005311 ORTHO05D006160 2.9e-43 179.5 197 55.3
A06p03410 Brassica napus HOM05D005311 ORTHO05D006160 2.9e-43 179.5 162 61.7
BolC6t35609H Brassica oleracea HOM05D005311 ORTHO05D006160 2.9e-43 179.5 197 55.3
Duzib132G0391 Durio zibethinus HOM05D005311 ORTHO05D006160 6.5e-43 178.3 226 48.7
BraA06t23549Z Brassica rapa HOM05D005311 ORTHO05D006160 1.1e-42 177.6 197 54.3
HanXRQChr03g0073011 Helianthus annuus HOM05D005311 ORTHO05D006160 1.9e-42 176.8 229 48.9
C06p04800 Brassica napus HOM05D005311 ORTHO05D006160 3.2e-42 176.0 197 54.3
Oeu037294.1 Olea europaea HOM05D005311 ORTHO05D006160 2.1e-41 173.3 145 61.4
Dinv09534 Davidia involucrata HOM05D000211 ORTHO05D002517 3.0e-40 169.5 189 52.9
Sabra09G0065400 Salix brachista HOM05D000308 ORTHO05D002517 1.5e-39 167.2 115 74.8
TPR.G21150 Trifolium pratense HOM05D005311 ORTHO05D006160 1.3e-38 164.1 148 60.1
Psat6g210680 Pisum sativum HOM05D005311 ORTHO05D006160 1.4e-37 160.6 132 62.9
EL10Ac9g22172 Beta vulgaris HOM05D005311 ORTHO05D006160 1.5e-36 157.1 198 53.0
BcaB04g17278 Brassica carinata HOM05D005311 ORTHO05D006160 5.9e-36 155.2 149 58.4
unitig_61.g26039 Utricularia gibba HOM05D005311 ORTHO05D006160 1.3e-35 154.1 159 52.2
Zm00001eb201730 Zea mays HOM05D005311 ORTHO05D006160 1.9e-34 150.2 176 50.6
arahy.Tifrunner.gnm1.ann1.YXS8EF Arachis hypogaea HOM05D005311 ORTHO05D006160 3.2e-34 149.4 145 56.6
CSS0025480 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 5.1e-32 142.1 155 60.0
Dinv44912 Davidia involucrata HOM05D005311 ORTHO05D006160 2.0e-31 140.2 138 58.7
PGR142G3492 Punica granatum HOM05D005311 ORTHO05D006160 2.6e-31 139.8 170 50.6
unitig_60.g25463 Utricularia gibba HOM05D005311 ORTHO05D006160 2.6e-31 139.8 205 45.4
Os11g0549900 Oryza sativa ssp. japonica HOM05D005311 ORTHO05D006160 9.7e-31 137.9 153 48.4
Oeu025305.1 Olea europaea HOM05D005311 ORTHO05D006160 4.1e-29 132.5 112 65.2
CDE02G0336 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 7.0e-29 131.7 153 53.6
Haze_10287 Corylus avellana HOM05D005311 ORTHO05D006160 3.8e-27 125.9 79 79.7
arahy.Tifrunner.gnm1.ann1.YSC4AN Arachis hypogaea HOM05D005311 ORTHO05D006160 5.0e-27 125.6 145 49.7
Cfa004693 Carpinus fangiana HOM05D005311 ORTHO05D006160 7.2e-26 121.7 78 79.5
Dinv16067 Davidia involucrata HOM05D005311 ORTHO05D006160 2.1e-25 120.2 117 59.0
SMO118G0105 Selaginella moellendorffii HOM05D005311 ORTHO05D006160 6.1e-25 118.6 220 36.8
CDE04G0288 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 5.2e-24 115.5 87 64.4
Mapoly0159s0003 Marchantia polymorpha HOM05D005311 ORTHO05D006160 6.7e-24 115.2 167 44.3
Rhsim05G0093200 Rhododendron simsii HOM05D005311 ORTHO05D006160 1.1e-23 114.4 200 43.5
vmacro22259 Vaccinium macrocarpon HOM05D005311 ORTHO05D006160 1.1e-23 114.4 145 47.6
Oeu037691.1 Olea europaea HOM05D005311 ORTHO05D006160 2.6e-23 113.2 94 64.9
SGA_v2.0_scaffold225G43064 Striga asiatica HOM05D005311 ORTHO05D006160 5.7e-23 112.1 94 64.9
Pp3c9_20640 Physcomitrium patens HOM05D005311 ORTHO05D006160 1.7e-22 110.5 178 41.6
arahy.Tifrunner.gnm1.ann1.6ZTX4G Arachis hypogaea HOM05D005311 ORTHO05D006160 4.8e-22 109.0 145 43.4
AagrBONN_evm.TU.Sc2ySwM_340.346 Anthoceros agrestis HOM05D005311 ORTHO05D006160 1.5e-18 97.4 184 38.0
arahy.Tifrunner.gnm1.ann1.HG6PX3 Arachis hypogaea HOM05D005311 ORTHO05D006160 6.8e-16 88.6 135 39.3
HPP92_006035 Vanilla planifolia HOM05D005311 ORTHO05D006160 3.4e-15 86.3 194 39.7
arahy.Tifrunner.gnm1.ann1.TC5M0Q Arachis hypogaea HOM05D005311 ORTHO05D006160 6.3e-14 82.0 130 38.5
Cre14.g614000 Chlamydomonas reinhardtii HOM05D005311 ORTHO05D006160 1.3e-11 74.3 89 48.3
SEGI_31449 Sequoiadendron giganteum HOM05D005311 ORTHO05D006160 3.8e-11 72.8 103 48.5
CARHR113150 Cardamine hirsuta HOM05D005311 ORTHO05D006160 3.6e-09 66.2 49 67.3
CBR_g12748 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-08 64.3 71 47.9
CSS0010436 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 1.2e-07 61.2 42 66.7


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