Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 5.0e-91 337.8 175 100.0
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 8.3e-46 187.6 159 65.4
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.5e-44 181.8 160 64.4
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.7e-38 163.3 112 72.3
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 8.3e-38 161.0 114 71.9
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 2.4e-37 159.5 161 58.4
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 2.7e-36 156.0 129 63.6
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 3.5e-36 155.6 153 60.8
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 4.6e-36 155.2 169 56.8
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 4.6e-36 155.2 169 56.8
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 7.8e-36 154.5 169 55.6
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 7.8e-36 154.5 135 63.7
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 1.3e-35 153.7 157 59.2
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 1.3e-35 153.7 101 78.2
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 1.7e-35 153.3 178 55.1
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 2.9e-35 152.5 170 54.1
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 6.6e-35 151.4 114 67.5
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 1.1e-34 150.6 157 56.7
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 4.3e-34 148.7 170 55.9
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 7.3e-34 147.9 112 70.5
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 1.2e-33 147.1 101 76.2
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 1.6e-33 146.7 186 53.8
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 2.1e-33 146.4 99 77.8
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 2.1e-33 146.4 112 67.0
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 3.6e-33 145.6 116 66.4
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 8.0e-33 144.4 153 56.2
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.0e-32 144.1 113 68.1
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 1.4e-32 143.7 121 66.1
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 1.4e-32 143.7 121 65.3
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 1.4e-32 143.7 146 56.2
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 1.8e-32 143.3 121 65.3
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 1.8e-32 143.3 101 73.3
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 1.8e-32 143.3 102 71.6
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 2.3e-32 142.9 116 68.1
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 3.1e-32 142.5 121 64.5
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 3.1e-32 142.5 135 59.3
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 4.0e-32 142.1 146 58.9
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 4.0e-32 142.1 101 73.3
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 6.8e-32 141.4 121 64.5
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 6.8e-32 141.4 121 64.5
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 6.8e-32 141.4 162 53.7
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 1.2e-31 140.6 100 73.0
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 2.0e-31 139.8 100 74.0
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 2.6e-31 139.4 100 72.0
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 3.4e-31 139.0 115 65.2
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 4.4e-31 138.7 155 51.6
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 4.4e-31 138.7 184 49.5
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 7.5e-31 137.9 100 72.0
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 9.8e-31 137.5 110 65.5
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 9.8e-31 137.5 99 74.7
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 2.2e-30 136.3 156 54.5
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 4.9e-30 135.2 100 71.0
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 7.8e-28 127.9 143 50.3
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 7.8e-28 127.9 98 69.4
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 3.0e-27 125.9 88 73.9
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 3.9e-27 125.6 88 77.3
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 7.3e-26 121.3 99 65.7
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 8.1e-25 117.9 98 66.3
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.4e-24 117.1 87 67.8
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 5.2e-24 115.2 156 48.7
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 7.5e-23 111.3 124 54.0
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 9.8e-23 110.9 101 60.4
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 6.0e-20 101.7 104 52.9
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 1.3e-19 100.5 107 59.8
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 2.3e-19 99.8 67 73.1
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.5e-18 97.1 64 75.0
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 2.5e-18 96.3 64 73.4
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 2.0e-15 86.7 60 68.3
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.3e-14 84.0 67 59.7
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 4.7e-09 65.5 103 38.8
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 2.6e-07 59.7 106 36.8


User provided reference genes

Program Settings