Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.5e-192 676.0 335 100.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.9e-147 526.2 309 83.8
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.7e-146 522.3 307 80.1
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.1e-142 510.4 307 79.8
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 7.6e-141 504.2 309 77.7
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 4.2e-139 498.4 309 77.7
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.6e-138 496.5 307 77.2
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.8e-137 493.0 307 76.5
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.9e-137 491.9 307 76.5
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 6.7e-137 491.1 309 75.4
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-136 490.0 309 75.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 3.3e-136 488.8 307 76.9
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 3.3e-136 488.8 309 76.1
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 4.3e-136 488.4 308 76.3
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 9.7e-136 487.3 294 79.6
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.7e-136 487.3 309 74.8
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.2e-135 486.1 309 76.1
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.8e-135 485.7 309 75.4
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.3e-135 484.6 309 74.4
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.4e-134 483.4 309 74.4
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 2.0e-133 479.6 310 75.2
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.5e-132 474.2 307 73.6
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 2.5e-131 472.6 309 73.5
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 2.5e-131 472.6 307 74.9
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.2e-130 470.3 297 74.7
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 3.0e-129 465.7 309 74.1
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 2.0e-128 463.0 303 73.9
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.6e-128 462.6 309 73.1
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 5.7e-128 461.5 308 72.1
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 9.7e-128 460.7 309 73.1
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.3e-127 460.3 297 73.4
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 2.2e-127 459.5 308 74.7
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.2e-127 459.5 307 72.0
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 6.3e-127 458.0 309 71.2
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.4e-126 456.1 309 71.8
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 6.9e-126 454.5 309 69.9
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.5e-125 453.4 310 69.7
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.5e-125 453.4 310 70.3
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 2.6e-125 452.6 310 69.4
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 2.6e-125 452.6 307 69.4
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 3.4e-125 452.2 309 69.6
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 7.7e-125 451.1 307 72.6
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.0e-124 450.7 301 70.8
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.2e-124 449.5 299 69.6
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.2e-124 449.5 307 70.0
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 5.0e-124 448.4 307 69.1
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 6.5e-124 448.0 302 70.2
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 6.5e-124 448.0 308 68.5
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 6.5e-124 448.0 308 73.1
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 6.5e-124 448.0 307 69.4
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 8.5e-124 447.6 307 69.7
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 7.2e-123 444.5 306 69.3
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 2.1e-122 443.0 307 67.1
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.1e-122 441.4 307 69.7
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.3e-121 439.5 310 68.4
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.3e-121 439.5 310 71.3
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.7e-121 438.0 309 69.3
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 6.7e-121 438.0 307 66.4
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 9.7e-120 434.1 300 68.0
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.4e-118 430.3 308 65.9
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.4e-118 429.5 314 67.2
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 3.1e-118 429.1 315 67.6
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 5.3e-118 428.3 300 67.0
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 9.1e-118 427.6 315 67.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.1e-118 427.6 316 68.0
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 2.0e-117 426.4 308 66.9
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 3.5e-117 425.6 306 67.0
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 4.5e-117 425.2 294 69.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 5.9e-117 424.9 308 66.9
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.0e-116 424.1 316 66.8
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.3e-116 423.7 306 68.0
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 3.8e-116 422.2 320 65.3
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 8.5e-116 421.0 321 66.0
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 3.2e-115 419.1 298 68.8
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 3.2e-115 419.1 298 68.8
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 4.2e-115 418.7 310 66.5
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 5.5e-115 418.3 298 68.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 5.5e-115 418.3 298 68.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 5.5e-115 418.3 298 68.1
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.6e-114 416.8 309 66.0
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.6e-114 416.8 322 64.6
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.6e-112 409.5 296 67.9
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.2e-111 406.4 300 64.7
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.8e-110 403.3 306 69.6
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 4.1e-110 402.1 297 66.3
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.0e-108 397.5 293 64.8
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.2e-108 396.4 309 63.4
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 8.5e-108 394.4 295 66.4
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.2e-105 385.2 302 63.2
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 3.2e-99 365.9 310 60.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 3.0e-97 359.4 309 59.2
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 4.0e-97 359.0 284 63.4
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 4.3e-91 339.0 286 58.7
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.5e-91 337.8 181 90.6
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.5e-91 337.8 261 67.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.0e-85 320.1 288 56.2
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.9e-85 318.5 288 56.9
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 8.6e-84 314.7 215 73.5
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 5.2e-81 305.4 301 51.5
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.9e-71 273.1 181 72.9
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 3.7e-71 272.7 201 65.2
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-56 224.6 133 81.2
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.4e-56 223.0 196 61.7
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.8e-55 219.5 141 72.3
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.4e-54 215.7 264 46.6
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.7e-53 213.4 156 65.4
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.6e-50 203.0 130 76.2
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.3e-49 199.1 156 65.4
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.0e-44 184.9 106 81.1
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.7e-42 176.4 144 59.7
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.7e-42 176.4 132 66.7
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.9e-29 132.1 126 52.4
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 4.1e-25 119.8 64 84.4
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.9e-23 113.6 107 48.6
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-21 108.2 72 72.2
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 6.9e-17 92.4 213 35.2
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.9e-15 87.0 250 27.2
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 6.1e-13 79.3 176 31.2
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.4e-06 58.2 173 29.5
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 3.2e-06 57.0 176 30.1


User provided reference genes

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