Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 9.6e-74 280.0 137 100.0
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 8.2e-57 223.8 139 81.3
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 2.4e-56 222.2 137 78.1
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.1e-53 213.4 137 78.8
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.4e-53 213.0 137 78.8
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.6e-52 209.5 137 77.4
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 1.3e-51 206.5 138 76.8
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 2.3e-51 205.7 137 77.4
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 5.7e-50 201.1 138 76.8
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 5.7e-50 201.1 140 74.3
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.2e-49 199.1 141 72.3
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.2e-49 199.1 141 72.3
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 6.3e-49 197.6 138 75.4
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 4.1e-48 194.9 135 73.3
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 4.1e-48 194.9 135 73.3
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 4.1e-48 194.9 133 73.7
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 5.3e-48 194.5 140 72.1
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 6.9e-48 194.1 143 72.0
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 9.0e-48 193.7 137 68.6
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 9.0e-48 193.7 143 71.3
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 9.0e-48 193.7 137 69.3
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.2e-47 193.4 139 72.7
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 1.2e-47 193.4 137 73.7
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 2.0e-47 192.6 137 72.3
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 2.6e-47 192.2 135 71.9
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 2.6e-47 192.2 139 69.1
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 2.6e-47 192.2 135 71.9
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.6e-47 192.2 140 72.9
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 3.4e-47 191.8 140 72.9
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.0e-46 190.3 140 72.1
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 1.0e-46 190.3 141 71.6
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 2.2e-46 189.1 145 69.7
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 2.2e-46 189.1 145 69.7
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 2.2e-46 189.1 142 70.4
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 2.9e-46 188.7 145 69.0
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 2.9e-46 188.7 144 70.1
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 2.9e-46 188.7 144 70.1
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 2.9e-46 188.7 145 69.0
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 2.9e-46 188.7 145 69.0
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 2.9e-46 188.7 144 70.1
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 2.9e-46 188.7 149 67.1
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 3.8e-46 188.3 137 69.3
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 5.0e-46 188.0 147 66.7
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 6.5e-46 187.6 146 66.4
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 6.5e-46 187.6 140 70.0
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 6.5e-46 187.6 141 70.9
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.1e-45 186.8 150 66.0
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 1.4e-45 186.4 135 72.6
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 1.4e-45 186.4 143 72.0
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 1.9e-45 186.0 144 69.4
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 1.9e-45 186.0 144 69.4
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 1.9e-45 186.0 139 69.1
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 2.5e-45 185.7 149 67.1
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.5e-45 185.7 135 68.9
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 4.2e-45 184.9 149 68.5
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 4.2e-45 184.9 135 68.1
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 5.5e-45 184.5 135 68.1
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 7.2e-45 184.1 141 70.9
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 7.2e-45 184.1 141 68.1
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 1.6e-44 183.0 136 67.6
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 1.6e-44 183.0 139 67.6
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 2.7e-44 182.2 106 83.0
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 3.6e-44 181.8 141 67.4
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 3.6e-44 181.8 106 82.1
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 4.6e-44 181.4 138 68.1
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 4.6e-44 181.4 140 66.4
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 4.6e-44 181.4 139 67.6
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 4.6e-44 181.4 141 68.1
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 4.6e-44 181.4 138 68.8
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 4.6e-44 181.4 148 65.5
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 6.1e-44 181.0 141 71.6
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 6.1e-44 181.0 141 66.0
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.8e-43 179.5 137 66.4
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 1.8e-43 179.5 139 67.6
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 1.8e-43 179.5 147 63.3
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 2.3e-43 179.1 138 64.5
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 2.3e-43 179.1 141 68.8
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 5.1e-43 177.9 138 65.2
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 5.1e-43 177.9 138 65.2
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 8.8e-43 177.2 137 65.7
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 1.5e-42 176.4 141 66.0
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 3.3e-42 175.3 149 65.1
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 3.3e-42 175.3 138 65.9
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 5.7e-42 174.5 102 84.3
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 5.7e-42 174.5 137 63.5
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 9.7e-42 173.7 104 80.8
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 1.3e-41 173.3 136 64.7
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 1.3e-41 173.3 136 64.7
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 1.7e-41 172.9 140 67.9
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 2.2e-41 172.6 136 63.2
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 2.2e-41 172.6 135 63.7
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 2.8e-41 172.2 142 66.2
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 2.8e-41 172.2 129 65.9
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 1.4e-40 169.9 137 62.0
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 2.4e-40 169.1 139 63.3
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 3.1e-40 168.7 126 67.5
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 5.3e-40 167.9 100 79.0
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 9.1e-40 167.2 131 64.9
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 9.1e-40 167.2 137 62.0
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 7.7e-39 164.1 138 65.2
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 1.7e-38 162.9 141 61.7
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 2.5e-37 159.1 101 69.3
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.6e-36 156.4 102 70.6
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 7.9e-36 154.1 114 70.2
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 7.9e-36 154.1 102 71.6
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.7e-33 146.4 102 65.7
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 2.8e-33 145.6 100 64.0
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 4.8e-33 144.8 102 61.8
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 4.8e-33 144.8 147 54.4
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 4.8e-33 144.8 147 54.4
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 1.1e-32 143.7 101 63.4
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 7.0e-32 141.0 106 65.1
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 1.9e-29 132.9 77 87.0
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 6.1e-28 127.9 77 81.8
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 8.0e-28 127.5 98 58.2
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 8.8e-27 124.0 107 56.1
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 2.0e-26 122.9 102 55.9
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.3e-25 120.2 107 53.3
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 6.3e-25 117.9 119 48.7
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 1.2e-20 103.6 60 76.7
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.0e-19 100.5 102 48.0
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 8.8e-19 97.4 75 68.0
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 2.6e-18 95.9 97 45.4
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 4.4e-18 95.1 75 66.7
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 6.3e-17 91.3 59 74.6
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 1.7e-09 66.6 59 62.7
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 2.8e-09 65.9 57 54.4


User provided reference genes

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