Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 3.4e-107 391.7 206 100.0
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 3.9e-55 218.8 209 61.2
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.1e-52 210.7 209 52.6
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.4e-52 210.3 208 51.9
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 7.0e-52 208.0 209 51.2
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 3.5e-51 205.7 225 48.0
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 1.9e-49 199.9 214 51.4
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 2.5e-49 199.5 206 55.3
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 3.2e-49 199.1 206 52.9
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 7.2e-49 198.0 208 52.9
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 5.2e-47 191.8 207 48.3
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.7e-47 191.4 215 50.7
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.5e-46 190.3 211 49.8
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.5e-46 190.3 215 50.2
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 4.4e-46 188.7 206 51.9
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.4e-46 188.7 215 50.2
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 7.5e-46 188.0 210 48.6
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 9.7e-46 187.6 209 55.5
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 1.1e-44 184.1 206 51.5
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 1.1e-44 184.1 206 51.5
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 2.4e-44 183.0 208 51.0
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 4.1e-44 182.2 209 51.2
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 1.2e-43 180.6 216 48.1
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 1.6e-43 180.3 201 50.7
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 5.9e-43 178.3 206 46.1
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 7.7e-43 177.9 207 53.6
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 1.0e-42 177.6 219 53.4
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.3e-42 177.2 216 47.2
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.3e-42 177.2 206 46.1
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.7e-42 176.8 212 47.2
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 3.8e-42 175.6 209 48.8
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 6.5e-42 174.9 207 49.3
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 5.5e-41 171.8 210 46.7
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.2e-40 170.6 210 46.7
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.1e-40 169.9 216 46.3
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.7e-40 169.5 210 49.5
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.6e-40 169.1 210 46.2
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 6.1e-40 168.3 217 52.1
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 8.0e-40 167.9 207 52.2
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.0e-39 167.5 201 46.3
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.4e-39 167.2 206 51.9
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.8e-39 166.8 207 51.7
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.3e-39 166.4 210 47.6
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 2.3e-39 166.4 206 43.7
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 2.3e-39 166.4 206 43.7
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 2.3e-39 166.4 218 46.3
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 1.2e-38 164.1 158 55.1
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 5.7e-38 161.8 205 48.3
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 5.7e-38 161.8 206 42.7
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 9.8e-38 161.0 207 44.0
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.8e-37 159.5 210 46.7
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 2.8e-37 159.5 210 51.0
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 6.3e-37 158.3 208 44.2
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 8.3e-37 157.9 211 44.5
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 1.1e-36 157.5 199 43.2
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.1e-36 157.5 203 46.3
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 7.0e-36 154.8 202 45.0
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 9.1e-36 154.5 202 45.0
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 9.1e-36 154.5 198 43.9
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 2.0e-35 153.3 206 42.2
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 2.0e-35 153.3 206 43.2
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 3.5e-35 152.5 207 40.6
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 1.7e-34 150.2 202 43.6
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 2.3e-34 149.8 207 45.9
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 2.9e-34 149.4 206 40.8
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 6.5e-34 148.3 207 40.6
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 8.6e-34 147.9 203 47.3
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 8.6e-34 147.9 211 46.4
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.9e-33 146.7 209 46.9
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.9e-33 146.7 197 47.7
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 3.3e-33 146.0 209 45.9
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 3.6e-32 142.5 192 49.0
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 4.7e-32 142.1 210 48.1
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 8.0e-32 141.4 215 40.9
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 1.0e-31 141.0 196 39.8
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.0e-31 139.4 225 37.8
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 4.0e-31 139.0 224 36.6
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.2e-31 138.7 198 40.4
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 6.8e-31 138.3 198 43.9
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 2.6e-30 136.3 220 40.0
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 5.7e-30 135.2 223 39.0
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 7.5e-30 134.8 234 35.5
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 6.3e-29 131.7 308 37.3
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 1.4e-28 130.6 207 44.4
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 2.4e-28 129.8 195 39.0
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 3.1e-28 129.4 220 40.5
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 9.2e-28 127.9 139 47.5
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 9.2e-28 127.9 210 42.4
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.2e-27 127.5 224 34.8
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 5.0e-26 122.1 164 42.1
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.9e-25 120.2 190 38.4
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 4.3e-25 119.0 200 37.5
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 7.3e-25 118.2 199 36.7
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 7.3e-25 118.2 209 36.8
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.2e-24 117.5 204 36.3
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.2e-24 117.5 204 36.3
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 3.6e-24 115.9 217 35.0
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 4.7e-24 115.5 200 36.0
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 8.9e-23 111.3 209 34.4
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 8.9e-23 111.3 200 35.5
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.2e-22 110.9 200 35.5
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 1.5e-22 110.5 200 35.0
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.3e-21 107.5 157 40.1
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.7e-21 107.1 201 34.8
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 2.9e-21 106.3 206 34.0
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 1.1e-20 104.4 198 36.9
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 1.4e-20 104.0 205 33.7
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 7.0e-20 101.7 207 33.3
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.0e-19 100.1 168 41.1
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 7.3e-17 91.7 197 30.5
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 9.5e-17 91.3 217 32.7
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 2.8e-16 89.7 211 33.6
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 7.5e-14 81.6 176 33.5
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 3.7e-13 79.3 178 33.7
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.7e-13 79.3 208 37.5
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.7e-13 79.3 208 37.5
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 3.7e-13 79.3 101 41.6
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 3.2e-12 76.3 135 36.3
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 1.0e-10 71.2 234 28.2
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 4.7e-08 62.4 34 70.6
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 5.2e-07 58.9 88 47.7
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 7.5e-06 55.1 39 53.8


User provided reference genes

Program Settings