Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 1.5e-34 149.1 80 100.0
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 1.2e-23 112.8 80 72.5
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 1.5e-23 112.5 80 73.8
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 1.5e-23 112.5 80 73.8
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 1.0e-22 109.8 80 71.2
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 2.2e-22 108.6 80 71.2
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 2.5e-21 105.1 81 70.4
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 3.2e-21 104.8 80 68.8
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 9.4e-21 103.2 80 67.5
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 1.2e-20 102.8 80 68.8
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 2.1e-20 102.1 80 65.0
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 3.6e-20 101.3 80 67.5
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 3.6e-20 101.3 81 66.7
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 4.7e-20 100.9 80 66.2
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 4.7e-20 100.9 81 70.4
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 7.9e-20 100.1 81 67.9
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 1.0e-19 99.8 81 69.1
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 1.4e-19 99.4 77 72.7
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 1.8e-19 99.0 80 66.2
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 1.8e-19 99.0 80 63.8
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 2.3e-19 98.6 80 63.8
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 5.1e-19 97.4 76 68.4
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 8.8e-19 96.7 82 64.6
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 1.1e-18 96.3 82 64.6
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 1.1e-18 96.3 77 64.9
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 1.1e-18 96.3 79 68.4
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 1.5e-18 95.9 80 65.0
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 1.5e-18 95.9 80 67.5
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 2.0e-18 95.5 80 62.5
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 2.6e-18 95.1 80 60.0
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 2.6e-18 95.1 80 62.5
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 3.3e-18 94.7 80 63.8
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 5.7e-18 94.0 81 61.7
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 5.7e-18 94.0 80 62.5
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 7.4e-18 93.6 83 62.7
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 7.4e-18 93.6 81 63.0
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 7.4e-18 93.6 81 63.0
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 7.4e-18 93.6 78 65.4
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 7.4e-18 93.6 80 61.2
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 9.7e-18 93.2 84 61.9
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 9.7e-18 93.2 83 60.2
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 1.7e-17 92.4 83 61.4
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 2.2e-17 92.0 80 66.2
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 2.2e-17 92.0 80 65.0
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 2.8e-17 91.7 82 62.2
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 3.7e-17 91.3 76 64.5
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 8.2e-17 90.1 80 61.2
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 8.2e-17 90.1 76 64.5
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 8.2e-17 90.1 76 61.8
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 1.1e-16 89.7 80 65.0
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 1.1e-16 89.7 80 61.2
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 1.1e-16 89.7 80 62.5
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 1.8e-16 89.0 80 65.0
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 1.8e-16 89.0 88 60.2
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 1.8e-16 89.0 83 60.2
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 5.3e-16 87.4 80 60.0
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 5.3e-16 87.4 81 61.7
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 7.0e-16 87.0 80 56.2
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 9.1e-16 86.7 80 60.0
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 2.6e-15 85.1 80 60.0
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 2.6e-15 85.1 80 57.5
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 3.5e-15 84.7 77 55.8
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 4.5e-15 84.3 77 55.8
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 4.5e-15 84.3 101 50.5
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 5.9e-15 84.0 77 57.1
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 1.0e-14 83.2 75 57.3
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 1.3e-14 82.8 78 56.4
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 1.7e-14 82.4 86 59.3
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 2.2e-14 82.0 82 54.9
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 2.2e-14 82.0 59 66.1
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 3.8e-14 81.3 77 54.5
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 3.8e-14 81.3 77 54.5
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 3.8e-14 81.3 77 54.5
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 3.8e-14 81.3 77 54.5
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 5.0e-14 80.9 68 58.8
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 5.0e-14 80.9 53 77.4
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 5.0e-14 80.9 54 72.2
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 6.5e-14 80.5 58 69.0
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 1.5e-13 79.3 65 60.0
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 1.9e-13 79.0 75 52.0
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 4.2e-13 77.8 122 41.0
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 4.2e-13 77.8 81 50.6
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 7.2e-13 77.0 65 58.5
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 9.4e-13 76.6 64 59.4
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 2.7e-12 75.1 54 66.7
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 4.7e-12 74.3 57 61.4
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 8.0e-12 73.6 59 62.7
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 2.0e-10 68.9 116 41.4
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 2.2e-09 65.5 40 82.5
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 4.8e-09 64.3 46 71.7
MBI02_g20368_MAGBIO Magnolia biondii HOM05D007703 ORTHO05D009731 5.3e-08 60.8 45 66.7
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 7.7e-07 57.0 32 87.5


User provided reference genes

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