Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 6.2e-132 474.2 244 100.0
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 1.2e-87 327.0 244 70.5
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 2.9e-81 305.8 253 68.8
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 1.1e-80 303.9 258 65.1
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.1e-79 299.7 247 64.4
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 7.4e-77 291.2 256 66.4
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 9.7e-77 290.8 253 66.8
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 5.9e-74 281.6 249 65.9
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 1.7e-73 280.0 250 64.4
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 3.8e-73 278.9 257 64.6
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 1.4e-72 276.9 251 64.1
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 7.9e-71 271.2 257 61.9
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 2.3e-70 269.6 256 62.1
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 5.1e-70 268.5 248 60.9
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 6.7e-70 268.1 255 60.8
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 1.1e-69 267.3 253 61.3
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 4.4e-69 265.4 249 61.0
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 4.4e-69 265.4 255 60.4
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 1.7e-68 263.5 248 60.1
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 1.7e-68 263.5 246 62.6
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 6.3e-68 261.5 255 60.4
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 6.3e-68 261.5 255 60.4
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 8.2e-68 261.2 207 67.6
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 1.4e-67 260.4 248 60.1
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 1.4e-67 260.4 254 61.0
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.4e-67 259.6 250 60.0
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.4e-67 259.6 205 68.3
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 3.1e-67 259.2 246 61.0
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 4.1e-67 258.8 247 60.7
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 7.0e-67 258.1 251 62.5
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 9.1e-67 257.7 254 59.1
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 1.5e-66 256.9 256 60.2
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.5e-66 256.9 256 59.8
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.0e-66 256.5 250 62.8
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 2.0e-66 256.5 254 58.7
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 2.2e-65 253.1 253 58.9
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 2.2e-65 253.1 249 59.0
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 5.0e-65 251.9 274 56.6
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 5.0e-65 251.9 254 58.7
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 6.5e-65 251.5 259 58.7
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 6.5e-65 251.5 253 58.9
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.1e-64 250.8 252 60.3
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 2.5e-64 249.6 253 60.5
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 2.5e-64 249.6 256 58.2
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.5e-64 249.6 249 58.6
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 4.2e-64 248.8 251 57.4
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 5.5e-64 248.4 269 57.6
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 7.2e-64 248.1 252 59.1
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 7.2e-64 248.1 249 58.6
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 9.4e-64 247.7 259 57.5
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 1.2e-63 247.3 253 59.3
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.0e-62 244.2 252 59.9
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 1.4e-62 243.8 253 57.7
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.4e-62 243.8 299 52.8
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 1.1e-61 240.7 254 55.9
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 1.5e-61 240.4 257 58.0
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 3.3e-61 239.2 276 53.3
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 3.3e-61 239.2 245 57.1
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 5.7e-61 238.4 253 54.9
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 7.4e-61 238.0 218 62.4
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 1.4e-59 233.8 183 66.7
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 2.0e-58 229.9 137 85.4
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 2.6e-58 229.6 248 55.2
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 2.6e-58 229.6 246 55.7
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 5.9e-58 228.4 253 54.2
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.3e-57 227.3 215 59.5
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 1.7e-57 226.9 251 57.8
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 1.9e-56 223.4 247 54.3
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.6e-55 220.3 246 54.1
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 1.6e-55 220.3 248 54.0
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 2.7e-55 219.5 285 52.3
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.1e-55 218.4 247 55.9
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 8.0e-55 218.0 249 55.0
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.4e-54 217.2 247 54.7
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 3.0e-54 216.1 265 52.5
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 5.2e-54 215.3 249 54.2
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 2.6e-53 213.0 246 52.8
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 2.6e-53 213.0 250 55.6
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.7e-52 210.3 150 70.7
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 3.7e-52 209.1 206 59.2
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 4.8e-52 208.8 247 52.6
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 4.8e-52 208.8 246 53.3
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 6.3e-52 208.4 248 52.4
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 1.4e-51 207.2 252 54.0
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.4e-51 207.2 150 69.3
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 2.4e-51 206.5 247 53.8
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.4e-51 206.5 248 54.0
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 2.0e-50 203.4 247 52.6
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 2.0e-50 203.4 281 50.5
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 3.5e-50 202.6 247 53.0
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 4.5e-50 202.2 247 53.0
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 7.7e-50 201.4 249 50.6
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 2.2e-49 199.9 252 50.0
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 6.5e-49 198.4 268 48.9
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 1.5e-48 197.2 265 49.4
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 2.5e-48 196.4 245 52.7
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.2e-47 194.1 251 49.4
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 3.0e-46 189.5 251 49.8
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 4.0e-46 189.1 230 50.9
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 5.2e-46 188.7 254 50.0
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 8.8e-46 188.0 228 50.9
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 1.2e-45 187.6 236 49.6
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 1.5e-45 187.2 266 47.7
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 5.7e-45 185.3 139 71.2
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 9.8e-45 184.5 238 49.6
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 1.3e-44 184.1 238 49.6
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 2.8e-44 183.0 238 49.2
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 6.3e-44 181.8 120 74.2
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 3.1e-43 179.5 268 45.9
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 9.1e-43 177.9 240 50.4
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 1.3e-41 174.1 235 46.8
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 8.6e-41 171.4 244 46.3
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.6e-41 171.4 141 68.1
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 1.4e-38 164.1 255 45.5
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 4.9e-36 155.6 261 41.0
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 6.3e-36 155.2 175 53.1
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.6e-31 140.6 261 44.1
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 3.6e-31 139.4 142 54.2
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 1.0e-30 137.9 215 44.7
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 4.0e-30 136.0 176 50.0
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 2.9e-28 129.8 176 50.0
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 7.8e-26 121.7 180 46.7
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 6.8e-22 108.6 74 71.6
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 1.3e-20 104.4 75 69.3
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 4.9e-20 102.4 136 51.5
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 5.4e-19 99.0 141 48.2
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 1.2e-18 97.8 220 35.5
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 4.7e-15 85.9 126 44.4
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-10 70.9 105 44.8
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 1.5e-08 64.3 238 29.8
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 1.2e-07 61.2 57 54.4


User provided reference genes

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