Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1120 Trochodendron aralioides HOM05D004858 ORTHO05D005600 2.8e-54 214.9 102 100.0
TAR381G0631 Trochodendron aralioides HOM05D004858 ORTHO05D005600 2.5e-42 175.3 102 80.4
CDE01G0584 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 9.4e-42 173.3 98 78.6
Nn6g34570 Nelumbo nucifera HOM05D004858 ORTHO05D005600 2.7e-41 171.8 102 81.4
CDE02G3413 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 3.6e-41 171.4 98 78.6
MBI16_g05028_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 1.5e-39 166.0 100 76.0
MBI16_g31809_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 2.6e-39 165.2 98 75.5
Nn5g30705 Nelumbo nucifera HOM05D004858 ORTHO05D005600 2.6e-39 165.2 87 87.4
Cfa006798 Carpinus fangiana HOM05D004858 ORTHO05D005600 1.7e-38 162.5 100 78.0
Aqoxy6G01531 Aquilegia oxysepala HOM05D004858 ORTHO05D005600 4.8e-38 161.0 106 71.7
Gohir.A02G148000 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.1e-37 159.8 100 77.0
Gorai.003G034000 Gossypium raimondii HOM05D004858 ORTHO05D005600 1.1e-37 159.8 100 77.0
QL06p038187 Quercus lobata HOM05D004858 ORTHO05D005600 1.1e-37 159.8 100 75.0
Dinv23069 Davidia involucrata HOM05D004858 ORTHO05D005600 2.4e-37 158.7 95 75.8
Gohir.D03G032400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 3.1e-37 158.3 100 77.0
CiPaw.08G148200 Carya illinoinensis HOM05D004858 ORTHO05D005600 5.3e-37 157.5 100 76.0
CANSAT01G1371 Cannabis sativa HOM05D004858 ORTHO05D005600 9.1e-37 156.8 99 73.7
Ciclev10026828m.g Citrus clementina HOM05D004858 ORTHO05D005600 2.0e-36 155.6 99 76.8
CSS0041224 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 3.5e-36 154.8 98 75.5
CSS0047057 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 3.5e-36 154.8 98 75.5
Actinidia36402 Actinidia chinensis HOM05D004858 ORTHO05D005600 7.7e-36 153.7 98 73.5
CiPaw.07G039500 Carya illinoinensis HOM05D004858 ORTHO05D005600 7.7e-36 153.7 100 75.0
COL.COLO4_11647 Corchorus olitorius HOM05D004858 ORTHO05D005600 2.9e-35 151.8 100 73.0
Duzib147G0425 Durio zibethinus HOM05D004858 ORTHO05D005600 2.9e-35 151.8 100 74.0
Peaxi162Scf00118g01314 Petunia axillaris HOM05D004858 ORTHO05D005600 2.9e-35 151.8 95 72.6
arahy.Tifrunner.gnm1.ann1.YV33P0 Arachis hypogaea HOM05D004858 ORTHO05D005600 5.0e-35 151.0 97 72.2
Gohir.A11G210700 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.5e-34 149.4 97 75.3
Haze_03960 Corylus avellana HOM05D004858 ORTHO05D005600 1.9e-34 149.1 89 79.8
PGR102G0524 Punica granatum HOM05D004858 ORTHO05D005600 3.2e-34 148.3 96 76.0
Atru.chr3.1087 Acer truncatum HOM05D004858 ORTHO05D005600 5.5e-34 147.5 98 73.5
PSO675G0895 Papaver somniferum HOM05D004858 ORTHO05D005600 7.2e-34 147.1 96 70.8
Rhsim08G0089100 Rhododendron simsii HOM05D004858 ORTHO05D005600 9.4e-34 146.7 99 70.7
MSTRG.23644 Avicennia marina HOM05D004858 ORTHO05D005600 1.6e-33 146.0 99 70.7
TWI74G1540 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 2.1e-33 145.6 95 73.7
ATR0767G115 Amborella trichopoda HOM05D004858 ORTHO05D005600 2.7e-33 145.2 87 77.0
GSVIVG01006593001 Vitis vinifera HOM05D004858 ORTHO05D005600 2.7e-33 145.2 98 70.4
RcHm_v2.0_Chr2g0109411 Rosa chinensis HOM05D004858 ORTHO05D005600 3.6e-33 144.8 103 70.9
Eucgr.I00649 Eucalyptus grandis HOM05D004858 ORTHO05D005600 4.7e-33 144.4 97 75.3
FvH4_1g18620 Fragaria vesca HOM05D004858 ORTHO05D005600 4.7e-33 144.4 99 72.7
FAN19G1409 Fragaria x ananassa HOM05D004858 ORTHO05D005600 4.7e-33 144.4 99 72.7
Manes.12G119200 Manihot esculenta HOM05D004858 ORTHO05D005600 4.7e-33 144.4 100 71.0
Sc16g0000840 Simmondsia chinensis HOM05D004858 ORTHO05D005600 4.7e-33 144.4 98 70.4
THA.LOC104804193 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 4.7e-33 144.4 97 71.1
THA.LOC104807646 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 4.7e-33 144.4 96 67.7
Duzib187G0061 Durio zibethinus HOM05D004858 ORTHO05D005600 6.1e-33 144.1 97 73.2
Gohir.D11G212400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 6.1e-33 144.1 95 73.7
Gorai.007G228300 Gossypium raimondii HOM05D004858 ORTHO05D005600 6.1e-33 144.1 95 73.7
Hma1.2p1_1953F.1_g308860 Hydrangea macrophylla HOM05D004858 ORTHO05D005600 8.0e-33 143.7 101 67.3
Potri.007G008800 Populus trichocarpa HOM05D004858 ORTHO05D005600 8.0e-33 143.7 100 67.0
Ca_22084_v3 Cicer arietinum L. HOM05D004858 ORTHO05D005600 1.0e-32 143.3 103 67.0
FAN26G1754 Fragaria x ananassa HOM05D004858 ORTHO05D005600 1.0e-32 143.3 99 72.7
Glyma.05G110100 Glycine max HOM05D004858 ORTHO05D005600 1.0e-32 143.3 104 68.3
Prupe.6G213100 Prunus persica HOM05D004858 ORTHO05D005600 1.0e-32 143.3 100 69.0
VMungo0251G0206 Vigna mungo HOM05D004858 ORTHO05D005600 1.0e-32 143.3 100 69.0
FAN23G1848 Fragaria x ananassa HOM05D004858 ORTHO05D005600 1.8e-32 142.5 99 71.7
FAN28G0049 Fragaria x ananassa HOM05D004858 ORTHO05D005600 1.8e-32 142.5 99 71.7
Glyma.17G157000 Glycine max HOM05D004858 ORTHO05D005600 1.8e-32 142.5 104 68.3
HanXRQChr09g0263081 Helianthus annuus HOM05D004858 ORTHO05D005600 3.0e-32 141.7 100 69.0
Dinv26980 Davidia involucrata HOM05D004858 ORTHO05D005600 5.2e-32 141.0 85 76.5
EL10Ac6g14949 Beta vulgaris HOM05D004858 ORTHO05D005600 8.8e-32 140.2 101 64.4
MD02G1193900 Malus domestica HOM05D004858 ORTHO05D005600 1.2e-31 139.8 100 69.0
Lj4g0010254 Lotus japonicus HOM05D004858 ORTHO05D005600 1.5e-31 139.4 102 68.6
arahy.Tifrunner.gnm1.ann1.J6YKXI Arachis hypogaea HOM05D004858 ORTHO05D005600 2.0e-31 139.0 103 64.1
SGA_v2.0_scaffold121G33088 Striga asiatica HOM05D004858 ORTHO05D005600 4.4e-31 137.9 100 69.0
Medtr4g097800 Medicago truncatula HOM05D004858 ORTHO05D005600 7.5e-31 137.1 102 66.7
Cpa.g.sc129.47 Carica papaya HOM05D004858 ORTHO05D005600 9.8e-31 136.7 97 67.0
ClCG10G008050 Citrullus lanatus HOM05D004858 ORTHO05D005600 9.8e-31 136.7 97 71.1
CsaV3_3G007040 Cucumis sativus L. HOM05D004858 ORTHO05D005600 9.8e-31 136.7 97 72.2
Phvul.003G231600 Phaseolus vulgaris HOM05D004858 ORTHO05D005600 1.3e-30 136.3 100 67.0
SalBow3G1594 Salvia bowleyana HOM05D004858 ORTHO05D005600 1.3e-30 136.3 98 66.3
SalBow3G4557 Salvia bowleyana HOM05D004858 ORTHO05D005600 1.3e-30 136.3 98 66.3
Solyc03g043850.3 Solanum lycopersicum HOM05D004858 ORTHO05D005600 1.3e-30 136.3 84 70.2
THA.LOC104824932 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 1.3e-30 136.3 97 68.0
Os03g0772800 Oryza sativa ssp. japonica HOM05D004858 ORTHO05D005600 2.2e-30 135.6 96 67.7
CiPaw.10G150100 Carya illinoinensis HOM05D004858 ORTHO05D005600 2.8e-30 135.2 74 78.4
Manes.13G106700 Manihot esculenta HOM05D004858 ORTHO05D005600 3.7e-30 134.8 99 66.7
Lalb_Chr16g0385901 Lupinus albus HOM05D004858 ORTHO05D005600 4.8e-30 134.4 107 67.3
Lalb_Chr05g0220461 Lupinus albus HOM05D004858 ORTHO05D005600 6.3e-30 134.0 103 67.0
Lalb_Chr09g0329381 Lupinus albus HOM05D004858 ORTHO05D005600 6.3e-30 134.0 107 66.4
Nitab4.5_0026287g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 6.3e-30 134.0 88 73.9
DCAR_025838 Daucus carota HOM05D004858 ORTHO05D005600 8.3e-30 133.7 89 71.9
HanXRQChr14g0447621 Helianthus annuus HOM05D004858 ORTHO05D005600 1.4e-29 132.9 100 65.0
AUR62007965 Chenopodium quinoa HOM05D004858 ORTHO05D005600 2.4e-29 132.1 101 60.4
ECA232G2479 Erigeron canadensis HOM05D004858 ORTHO05D005600 2.4e-29 132.1 102 65.7
TPR.G22417 Trifolium pratense HOM05D004858 ORTHO05D005600 2.4e-29 132.1 102 64.7
Lsat_1_v5_gn_2_81581 Lactuca sativa HOM05D004858 ORTHO05D005600 4.1e-29 131.3 100 64.0
Oeu061526.2 Olea europaea HOM05D004858 ORTHO05D005600 4.1e-29 131.3 90 68.9
HPP92_024955 Vanilla planifolia HOM05D004858 ORTHO05D005600 4.1e-29 131.3 104 63.5
Carub.0007s0239 Capsella rubella HOM05D004858 ORTHO05D005600 7.0e-29 130.6 97 67.0
Sed0006730 Sechium edule HOM05D004858 ORTHO05D005600 7.0e-29 130.6 100 66.0
Oeu014311.1 Olea europaea HOM05D004858 ORTHO05D005600 1.6e-28 129.4 91 67.0
Thecc.01G079800 Theobroma cacao HOM05D004858 ORTHO05D005600 1.6e-28 129.4 89 73.0
Thhalv10026651m.g Eutrema salsugineum HOM05D004858 ORTHO05D005600 2.0e-28 129.0 97 66.0
unitig_46.g18678 Utricularia gibba HOM05D004858 ORTHO05D005600 2.0e-28 129.0 103 65.0
AL7G12840 Arabidopsis lyrata HOM05D004858 ORTHO05D005600 2.7e-28 128.6 97 66.0
PGSC0003DMG400017913 Solanum tuberosum HOM05D004858 ORTHO05D005600 2.7e-28 128.6 88 65.9
unitig_37.g12385 Utricularia gibba HOM05D004858 ORTHO05D005600 2.7e-28 128.6 99 63.6
ECA238G2402 Erigeron canadensis HOM05D004858 ORTHO05D005600 3.5e-28 128.3 99 63.6
HanXRQChr07g0203771 Helianthus annuus HOM05D004858 ORTHO05D005600 3.5e-28 128.3 100 61.0
Sp7g35470 Schrenkiella parvula HOM05D004858 ORTHO05D005600 4.5e-28 127.9 97 66.0
CSS0011371 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 5.9e-28 127.5 88 75.0
Peaxi162Scf00096g01525 Petunia axillaris HOM05D004858 ORTHO05D005600 7.7e-28 127.1 99 60.6
TWI77G0309 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 7.7e-28 127.1 94 63.8
Cc07_g07610 Coffea canephora HOM05D004858 ORTHO05D005600 1.0e-27 126.7 99 62.6
Duzib264G0490 Durio zibethinus HOM05D004858 ORTHO05D005600 1.3e-27 126.3 97 68.0
AT4G37830 Arabidopsis thaliana HOM05D004858 ORTHO05D005600 1.7e-27 125.9 97 62.9
BcaC01g00373 Brassica carinata HOM05D004858 ORTHO05D005600 2.9e-27 125.2 92 66.3
BolC3t20143H Brassica oleracea HOM05D004858 ORTHO05D005600 2.9e-27 125.2 92 66.3
CARHR246220 Cardamine hirsuta HOM05D004858 ORTHO05D005600 3.8e-27 124.8 97 63.9
MD15G1304000 Malus domestica HOM05D004858 ORTHO05D005600 3.8e-27 124.8 100 65.0
Zm00001eb058950 Zea mays HOM05D004858 ORTHO05D005600 3.8e-27 124.8 89 68.5
CAN.G1061.6 Capsicum annuum HOM05D004858 ORTHO05D005600 8.6e-27 123.6 98 65.3
Migut.L00438 Erythranthe guttata HOM05D004858 ORTHO05D005600 1.1e-26 123.2 100 62.0
A08p22870 Brassica napus HOM05D004858 ORTHO05D005600 1.5e-26 122.9 97 63.9
Solyc02g091880.4 Solanum lycopersicum HOM05D004858 ORTHO05D005600 1.9e-26 122.5 98 63.3
Sopen02g036450 Solanum pennellii HOM05D004858 ORTHO05D005600 1.9e-26 122.5 98 63.3
Sabra07G0006800 Salix brachista HOM05D004858 ORTHO05D005600 2.5e-26 122.1 88 65.9
Lsat_1_v5_gn_4_159121 Lactuca sativa HOM05D004858 ORTHO05D005600 4.2e-26 121.3 99 60.6
AUR62003145 Chenopodium quinoa HOM05D004858 ORTHO05D005600 1.2e-25 119.8 90 62.2
PGSC0003DMG400030258 Solanum tuberosum HOM05D004858 ORTHO05D005600 1.6e-25 119.4 90 63.3
DCAR_021459 Daucus carota HOM05D004858 ORTHO05D005600 6.1e-25 117.5 96 62.5
Aa31LG6G14730 Aethionema arabicum HOM05D004858 ORTHO05D005600 1.4e-24 116.3 132 53.0
Psat4g088320 Pisum sativum HOM05D004858 ORTHO05D005600 1.4e-24 116.3 90 65.6
C01p01370 Brassica napus HOM05D004858 ORTHO05D005600 6.8e-24 114.0 97 58.8
HPP92_021258 Vanilla planifolia HOM05D000682 ORTHO05D000510 6.8e-24 114.0 72 70.8
BolC1t00134H Brassica oleracea HOM05D004858 ORTHO05D005600 2.6e-23 112.1 97 57.7
Nitab4.5_0007790g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 3.7e-22 108.2 91 61.5
CSS0003752 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 4.1e-21 104.8 72 73.6
vmacro18001 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 2.3e-19 99.0 50 84.0
Nitab4.5_0002639g0030 Nicotiana tabacum HOM05D004858 ORTHO05D005600 2.9e-19 98.6 74 66.2
Mapoly0043s0104 Marchantia polymorpha HOM05D004858 ORTHO05D005600 3.3e-18 95.1 75 57.3
MELO3C014946.2 Cucumis melo HOM05D004858 ORTHO05D005600 1.6e-17 92.8 74 68.9
Ah.03g139600 Amaranthus hybridus HOM05D004858 ORTHO05D005600 6.1e-17 90.9 75 58.7
Sc03g0000690 Simmondsia chinensis HOM05D004858 ORTHO05D005600 6.1e-17 90.9 74 60.8
Pp3c5_3360 Physcomitrium patens HOM05D004858 ORTHO05D005600 4.0e-16 88.2 81 55.6
Hund16598 Selenicereus undatus HOM05D004858 ORTHO05D005600 8.9e-16 87.0 75 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1653 Anthoceros agrestis HOM05D004858 ORTHO05D005600 8.3e-14 80.5 79 51.9
C03p79020 Brassica napus HOM05D004858 ORTHO05D005600 8.3e-14 80.5 71 57.7
BraA08t34250Z Brassica rapa HOM05D004858 ORTHO05D005600 2.4e-13 79.0 74 58.1
PGSC0003DMG400030628 Solanum tuberosum HOM05D004858 ORTHO05D005600 4.1e-13 78.2 107 45.8
SEGI_12659 Sequoiadendron giganteum HOM05D004858 ORTHO05D005600 1.2e-12 76.6 54 63.0
Nitab4.5_0000396g0060 Nicotiana tabacum HOM05D004858 ORTHO05D005600 2.7e-12 75.5 75 56.0
BraA01t00120Z Brassica rapa HOM05D004858 ORTHO05D005600 3.5e-12 75.1 100 48.0
Pp3c6_25050 Physcomitrium patens HOM05D004858 ORTHO05D005600 3.0e-11 72.0 74 51.4
vmacro22430 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 1.9e-10 69.3 35 82.9
CBR_g50891 Chara braunii HOM05D004858 ORTHO05D005600 2.5e-10 68.9 93 39.8
TAR048G0001 Trochodendron aralioides HOM05D032931 ORTHO05D005600 2.1e-09 65.9 35 94.3
TAR636G2680 Trochodendron aralioides HOM05D032931 ORTHO05D005600 2.1e-09 65.9 35 94.3
PRCOL_00006369 Prasinoderma coloniale HOM05D004858 ORTHO05D005600 2.3e-08 62.4 92 38.0
TAR633G2452 Trochodendron aralioides HOM05D032931 ORTHO05D005600 6.8e-08 60.8 35 88.6
SHI12046 Sapria himalayana HOM05D004858 ORTHO05D005600 8.9e-08 60.5 53 54.7
Pp3c13_15160 Physcomitrium patens HOM05D004858 ORTHO05D005600 1.2e-07 60.1 62 46.8
arahy.Tifrunner.gnm1.ann1.0N5P6D Arachis hypogaea HOM05D004858 ORTHO05D005600 3.7e-06 55.1 51 58.8
arahy.Tifrunner.gnm1.ann1.HTA6FY Arachis hypogaea HOM05D004858 ORTHO05D005600 3.7e-06 55.1 51 58.8


User provided reference genes

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