Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0994 Trochodendron aralioides HOM05D004861 ORTHO05D001964 5.5e-59 230.7 112 100.0
TAR628G0932 Trochodendron aralioides HOM05D004861 ORTHO05D001964 9.1e-22 107.1 122 49.2
Cpa.g.sc6.293 Carica papaya HOM05D004861 ORTHO05D001964 1.6e-21 106.3 109 52.3
Hund14064 Selenicereus undatus HOM05D004861 ORTHO05D001964 2.0e-21 105.9 114 50.9
Ciclev10026280m.g Citrus clementina HOM05D004861 ORTHO05D001964 4.5e-21 104.8 116 51.7
Dinv33667 Davidia involucrata HOM05D004861 ORTHO05D001964 1.0e-20 103.6 109 54.1
TAR376G0516 Trochodendron aralioides HOM05D004861 ORTHO05D001964 1.0e-20 103.6 118 48.3
Dinv40122 Davidia involucrata HOM05D004861 ORTHO05D001964 1.3e-20 103.2 98 55.1
Medtr8g075190 Medicago truncatula HOM05D004861 ORTHO05D001964 1.7e-20 102.8 113 48.7
Hma1.2p1_0315F.1_g122370 Hydrangea macrophylla HOM05D004861 ORTHO05D001964 2.9e-20 102.1 98 54.1
Lj4A223T35 Lonicera japonica HOM05D004861 ORTHO05D001964 3.8e-20 101.7 107 56.1
Migut.H02183 Erythranthe guttata HOM05D004861 ORTHO05D001964 5.0e-20 101.3 98 52.0
CiPaw.07G061400 Carya illinoinensis HOM05D004861 ORTHO05D001964 8.5e-20 100.5 109 49.5
COL.COLO4_22468 Corchorus olitorius HOM05D004861 ORTHO05D001964 1.1e-19 100.1 109 50.5
Thecc.01G013900 Theobroma cacao HOM05D004861 ORTHO05D001964 1.1e-19 100.1 103 52.4
CSS0021454 Camellia sinensis var. sinensis HOM05D004861 ORTHO05D001964 1.9e-19 99.4 98 54.1
Cfa007008 Carpinus fangiana HOM05D004861 ORTHO05D001964 2.5e-19 99.0 114 49.1
MD15G1241500 Malus domestica HOM05D004861 ORTHO05D001964 2.5e-19 99.0 109 48.6
CANSAT01G1088 Cannabis sativa HOM05D004861 ORTHO05D001964 3.2e-19 98.6 109 45.9
Duzib147G1106 Durio zibethinus HOM05D004861 ORTHO05D001964 3.2e-19 98.6 109 49.5
Duzib264G0687 Durio zibethinus HOM05D004861 ORTHO05D001964 3.2e-19 98.6 99 52.5
Haze_03721 Corylus avellana HOM05D004861 ORTHO05D001964 5.5e-19 97.8 114 49.1
Ca_03631_v3 Cicer arietinum L. HOM05D004861 ORTHO05D001964 9.4e-19 97.1 109 48.6
Gohir.D11G180200 Gossypium hirsutum HOM05D004861 ORTHO05D001964 9.4e-19 97.1 97 53.6
Prupe.7G172500 Prunus persica HOM05D004861 ORTHO05D001964 9.4e-19 97.1 109 47.7
Atru.chr3.873 Acer truncatum HOM05D004861 ORTHO05D001964 1.6e-18 96.3 112 50.0
MSTRG.2733 Avicennia marina HOM05D004861 ORTHO05D001964 1.6e-18 96.3 99 50.5
AUR62003332 Chenopodium quinoa HOM05D004861 ORTHO05D001964 2.1e-18 95.9 107 48.6
Nn5g30794 Nelumbo nucifera HOM05D004861 ORTHO05D001964 2.1e-18 95.9 118 45.8
Psat4g101760 Pisum sativum HOM05D004861 ORTHO05D001964 2.1e-18 95.9 112 49.1
SalBow3G1445 Salvia bowleyana HOM05D004861 ORTHO05D001964 2.1e-18 95.9 118 46.6
SalBow3G4058 Salvia bowleyana HOM05D004861 ORTHO05D001964 2.1e-18 95.9 118 46.6
AUR62029512 Chenopodium quinoa HOM05D004861 ORTHO05D001964 2.7e-18 95.5 104 49.0
MELO3C013752.2 Cucumis melo HOM05D004861 ORTHO05D001964 2.7e-18 95.5 109 49.5
CsaV3_3G000640 Cucumis sativus L. HOM05D004861 ORTHO05D001964 2.7e-18 95.5 109 49.5
EL10Ac6g15516 Beta vulgaris HOM05D004861 ORTHO05D001964 3.6e-18 95.1 105 48.6
Cc07_g11120 Coffea canephora HOM05D004861 ORTHO05D001964 3.6e-18 95.1 97 49.5
Eucgr.J02473 Eucalyptus grandis HOM05D004861 ORTHO05D001964 3.6e-18 95.1 113 44.2
Gohir.A02G172700 Gossypium hirsutum HOM05D004861 ORTHO05D001964 3.6e-18 95.1 114 47.4
Gohir.D03G007200 Gossypium hirsutum HOM05D004861 ORTHO05D001964 3.6e-18 95.1 114 47.4
TWI09G1074 Tripterygium wilfordii HOM05D004861 ORTHO05D001964 3.6e-18 95.1 113 46.0
TPR.G19498 Trifolium pratense HOM05D004861 ORTHO05D001964 4.7e-18 94.7 109 49.5
Gorai.007G192100 Gossypium raimondii HOM05D004861 ORTHO05D001964 6.1e-18 94.4 103 50.5
GSVIVG01006513001 Vitis vinifera HOM05D004861 ORTHO05D001964 6.1e-18 94.4 84 57.1
arahy.Tifrunner.gnm1.ann1.67ZU0R Arachis hypogaea HOM05D004861 ORTHO05D001964 1.0e-17 93.6 109 48.6
arahy.Tifrunner.gnm1.ann1.HCQ68S Arachis hypogaea HOM05D004861 ORTHO05D001964 1.0e-17 93.6 109 48.6
Carub.0007s0429 Capsella rubella HOM05D004861 ORTHO05D001964 1.4e-17 93.2 87 56.3
Gorai.003G007500 Gossypium raimondii HOM05D004861 ORTHO05D001964 1.4e-17 93.2 108 50.0
Actinidia28721 Actinidia chinensis HOM05D004861 ORTHO05D001964 1.8e-17 92.8 97 49.5
Lalb_Chr09g0334231 Lupinus albus HOM05D004861 ORTHO05D001964 1.8e-17 92.8 119 43.7
PSO170G2109 Papaver somniferum HOM05D004861 ORTHO05D001964 1.8e-17 92.8 89 55.1
Gohir.A11G173200 Gossypium hirsutum HOM05D004861 ORTHO05D001964 2.3e-17 92.4 95 52.6
MD02G1127300 Malus domestica HOM05D004861 ORTHO05D001964 2.3e-17 92.4 109 45.9
ClCG10G000560 Citrullus lanatus HOM05D004861 ORTHO05D001964 3.0e-17 92.0 109 47.7
DCAR_010139 Daucus carota HOM05D004861 ORTHO05D001964 3.0e-17 92.0 102 50.0
Lj4g0003896 Lotus japonicus HOM05D004861 ORTHO05D001964 4.0e-17 91.7 95 48.4
Sc03g0003720 Simmondsia chinensis HOM05D004861 ORTHO05D001964 4.0e-17 91.7 94 50.0
Lsat_1_v5_gn_2_75700 Lactuca sativa HOM05D004861 ORTHO05D001964 5.2e-17 91.3 102 51.0
AT4G35930 Arabidopsis thaliana HOM05D004861 ORTHO05D001964 6.7e-17 90.9 88 54.5
PGR102G1053 Punica granatum HOM05D004861 ORTHO05D001964 6.7e-17 90.9 89 53.9
VMungo0251G3709 Vigna mungo HOM05D004861 ORTHO05D001964 6.7e-17 90.9 84 56.0
DCAR_014039 Daucus carota HOM05D004861 ORTHO05D001964 8.8e-17 90.5 105 49.5
Glyma.16G123900 Glycine max HOM05D004861 ORTHO05D001964 8.8e-17 90.5 111 45.9
Phvul.003G265700 Phaseolus vulgaris HOM05D004861 ORTHO05D001964 8.8e-17 90.5 84 54.8
vmacro18429 Vaccinium macrocarpon HOM05D004861 ORTHO05D001964 8.8e-17 90.5 98 49.0
Potri.005G110200 Populus trichocarpa HOM05D004861 ORTHO05D001964 1.2e-16 90.1 87 54.0
Sabra05G0090400 Salix brachista HOM05D004861 ORTHO05D001964 1.2e-16 90.1 87 54.0
Actinidia27235 Actinidia chinensis HOM05D004861 ORTHO05D001964 1.5e-16 89.7 92 48.9
MBI05_g33209_MAGBIO Magnolia biondii HOM05D004861 ORTHO05D001964 1.5e-16 89.7 104 49.0
TWI53G0158 Tripterygium wilfordii HOM05D004861 ORTHO05D001964 2.0e-16 89.4 113 43.4
Aqoxy5G01828 Aquilegia oxysepala HOM05D004861 ORTHO05D001964 2.6e-16 89.0 89 51.7
BolC7t46569H Brassica oleracea HOM05D004861 ORTHO05D001964 2.6e-16 89.0 95 49.5
BcaNung05052 Brassica carinata HOM05D004861 ORTHO05D001964 3.3e-16 88.6 95 48.4
Nitab4.5_0001685g0060 Nicotiana tabacum HOM05D004861 ORTHO05D001964 3.3e-16 88.6 102 48.0
Sed0012496 Sechium edule HOM05D004861 ORTHO05D001964 3.3e-16 88.6 108 46.3
Sp7g33710 Schrenkiella parvula HOM05D004861 ORTHO05D001964 4.4e-16 88.2 104 47.1
Glyma.02G045900 Glycine max HOM05D004861 ORTHO05D001964 7.5e-16 87.4 85 56.5
PGSC0003DMG400022527 Solanum tuberosum HOM05D004861 ORTHO05D001964 7.5e-16 87.4 108 45.4
CAN.G354.49 Capsicum annuum HOM05D004861 ORTHO05D001964 9.7e-16 87.0 95 47.4
SGA_v2.0_scaffold2G00975 Striga asiatica HOM05D004861 ORTHO05D001964 9.7e-16 87.0 97 48.5
unitig_736.g22723 Utricularia gibba HOM05D004861 ORTHO05D001964 9.7e-16 87.0 105 44.8
RcHm_v2.0_Chr2g0098831 Rosa chinensis HOM05D004861 ORTHO05D001964 1.3e-15 86.7 81 54.3
CARHR244330 Cardamine hirsuta HOM05D004861 ORTHO05D001964 1.7e-15 86.3 84 54.8
Thhalv10025800m.g Eutrema salsugineum HOM05D004861 ORTHO05D001964 1.7e-15 86.3 84 53.6
Sopen03g006160 Solanum pennellii HOM05D004861 ORTHO05D001964 2.2e-15 85.9 95 47.4
A03p63980 Brassica napus HOM05D004861 ORTHO05D001964 2.8e-15 85.5 72 61.1
Solyc03g033390.3 Solanum lycopersicum HOM05D004861 ORTHO05D001964 2.8e-15 85.5 95 46.3
HanXRQChr15g0487221 Helianthus annuus HOM05D004861 ORTHO05D001964 3.7e-15 85.1 123 46.3
HanXRQChr13g0414571 Helianthus annuus HOM05D004861 ORTHO05D001964 4.8e-15 84.7 113 44.2
QL06p051243 Quercus lobata HOM05D004861 ORTHO05D001964 4.8e-15 84.7 81 55.6
Aa31LG6G12880 Aethionema arabicum HOM05D004861 ORTHO05D001964 6.3e-15 84.3 86 53.5
CAN.G2331.2 Capsicum annuum HOM05D004861 ORTHO05D001964 1.4e-14 83.2 108 44.4
C07p61440 Brassica napus HOM05D004861 ORTHO05D001964 1.8e-14 82.8 84 50.0
Os10g0438500 Oryza sativa ssp. japonica HOM05D004861 ORTHO05D001964 1.8e-14 82.8 85 51.8
Zm00001eb047460 Zea mays HOM05D004861 ORTHO05D001964 2.4e-14 82.4 86 52.3
FvH4_1g11320 Fragaria vesca HOM05D004861 ORTHO05D001964 3.1e-14 82.0 80 52.5
HPP92_020724 Vanilla planifolia HOM05D004861 ORTHO05D001964 5.3e-14 81.3 109 44.0
Zm00001eb222730 Zea mays HOM05D004861 ORTHO05D001964 5.3e-14 81.3 86 51.2
ECA238G3415 Erigeron canadensis HOM05D004861 ORTHO05D001964 7.0e-14 80.9 106 46.2
HanXRQChr14g0441771 Helianthus annuus HOM05D004861 ORTHO05D001964 7.0e-14 80.9 99 46.5
SEGI_23955 Sequoiadendron giganteum HOM05D004861 ORTHO05D001964 7.0e-14 80.9 91 47.3
BraA03t15465Z Brassica rapa HOM05D004861 ORTHO05D001964 9.1e-14 80.5 85 51.8
THA.LOC104819741 Tarenaya hassleriana HOM05D004861 ORTHO05D001964 9.1e-14 80.5 82 51.2
ECA232G4489 Erigeron canadensis HOM05D004861 ORTHO05D001964 2.7e-13 79.0 95 44.2
Ah.03g149180 Amaranthus hybridus HOM05D004861 ORTHO05D001964 4.5e-13 78.2 93 44.1
Sed0009244 Sechium edule HOM05D004861 ORTHO05D001964 4.5e-13 78.2 83 49.4
Sc16g0001960 Simmondsia chinensis HOM05D004861 ORTHO05D001964 1.3e-12 76.6 101 44.6
PGSC0003DMG400003650 Solanum tuberosum HOM05D004861 ORTHO05D001964 2.9e-12 75.5 108 42.6
CDE02G1334 Ceratophyllum demersum HOM05D004861 ORTHO05D001964 1.1e-11 73.6 116 37.9
AL7G15110 Arabidopsis lyrata HOM05D004861 ORTHO05D001964 9.4e-11 70.5 73 53.4
Manes.01G149100 Manihot esculenta HOM05D004861 ORTHO05D001964 2.7e-10 68.9 90 44.4
Cfa012064 Carpinus fangiana HOM05D004861 ORTHO05D001964 6.1e-10 67.8 57 54.4
Rhsim08G0031700 Rhododendron simsii HOM05D004861 ORTHO05D001964 6.8e-09 64.3 79 46.8
CBR_g66688 Chara braunii HOM05D004861 ORTHO05D001964 8.8e-09 63.9 117 33.3
SMO339G0067 Selaginella moellendorffii HOM05D004861 ORTHO05D001964 1.2e-08 63.5 77 40.3
Haze_03744 Corylus avellana HOM05D004861 ORTHO05D001964 5.7e-08 61.2 45 66.7
AagrBONN_evm.TU.Sc2ySwM_368.3169 Anthoceros agrestis HOM05D004861 ORTHO05D001964 7.5e-08 60.8 73 43.8
MBI08_g41172_MAGBIO Magnolia biondii HOM05D004861 ORTHO05D001964 1.7e-07 59.7 91 42.9
Pp3c23_12690 Physcomitrium patens HOM05D004861 ORTHO05D001964 3.7e-07 58.5 43 62.8
Pp3c24_3500 Physcomitrium patens HOM05D004861 ORTHO05D001964 6.3e-07 57.8 39 61.5
Nitab4.5_0007831g0010 Nicotiana tabacum HOM05D004861 ORTHO05D001964 1.1e-06 57.0 76 44.7
Peaxi162Scf00635g00084 Petunia axillaris HOM05D004861 ORTHO05D001964 1.1e-06 57.0 76 43.4
Pp3c20_19230 Physcomitrium patens HOM05D004861 ORTHO05D001964 1.1e-06 57.0 52 50.0
VMungo1215G1794 Vigna mungo HOM05D004861 ORTHO05D001964 3.1e-06 55.5 36 69.4
Nitab4.5_0001789g0090 Nicotiana tabacum HOM05D004861 ORTHO05D001964 5.4e-06 54.7 97 38.1


User provided reference genes

Program Settings