Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.9e-69 265.8 139 100.0
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.3e-43 179.1 154 66.9
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 6.2e-36 154.5 165 57.0
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 6.8e-35 151.0 164 55.5
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 1.2e-34 150.2 160 58.8
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 2.6e-34 149.1 153 58.8
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 3.7e-33 145.2 165 57.0
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 8.3e-33 144.1 160 51.9
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 8.3e-33 144.1 158 56.3
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 2.4e-32 142.5 163 52.8
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.2e-31 140.2 145 54.5
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 2.1e-31 139.4 152 53.3
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 1.0e-30 137.1 180 48.3
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.3e-30 136.0 160 53.8
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.5e-29 133.3 167 50.3
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 3.3e-29 132.1 143 53.8
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 4.3e-29 131.7 167 52.7
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 7.3e-29 131.0 164 51.8
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 7.3e-29 131.0 153 52.3
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 9.5e-29 130.6 161 52.2
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 1.6e-28 129.8 152 49.3
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.6e-28 129.8 160 48.8
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 2.1e-28 129.4 174 50.0
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 2.8e-28 129.0 172 50.0
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 2.8e-28 129.0 147 49.7
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 3.6e-28 128.6 164 51.2
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 6.2e-28 127.9 167 52.1
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 1.1e-27 127.1 148 52.7
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.1e-27 127.1 152 50.7
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 1.1e-27 127.1 160 47.5
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.4e-27 126.7 146 50.7
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.4e-27 126.7 149 53.7
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 1.8e-27 126.3 164 50.6
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 2.3e-27 125.9 153 50.3
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 3.1e-27 125.6 157 49.7
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 5.2e-27 124.8 157 49.7
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 5.2e-27 124.8 161 47.8
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 5.2e-27 124.8 157 49.7
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 5.2e-27 124.8 157 49.7
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 5.2e-27 124.8 160 45.6
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 5.2e-27 124.8 153 49.7
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 6.8e-27 124.4 143 55.2
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.2e-26 123.6 160 45.6
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 1.2e-26 123.6 160 45.6
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.5e-26 123.2 161 47.8
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 1.5e-26 123.2 160 47.5
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.5e-26 123.2 140 50.7
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 1.5e-26 123.2 164 48.8
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 2.0e-26 122.9 157 49.7
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 2.0e-26 122.9 166 50.6
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 2.0e-26 122.9 165 52.7
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 2.0e-26 122.9 165 46.1
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 2.0e-26 122.9 165 46.1
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 2.6e-26 122.5 140 52.1
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 2.6e-26 122.5 140 52.1
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 2.6e-26 122.5 161 45.3
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 2.6e-26 122.5 140 52.1
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 2.6e-26 122.5 147 47.6
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 2.6e-26 122.5 137 55.5
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 2.6e-26 122.5 165 52.1
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 2.6e-26 122.5 138 54.3
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 4.4e-26 121.7 157 49.0
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 4.4e-26 121.7 141 53.2
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 4.4e-26 121.7 164 48.2
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 5.8e-26 121.3 140 50.0
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 7.6e-26 120.9 132 49.2
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 7.6e-26 120.9 183 44.8
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 9.9e-26 120.6 162 50.6
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.3e-25 120.2 179 45.8
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 2.2e-25 119.4 173 47.4
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 2.9e-25 119.0 173 46.8
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 2.9e-25 119.0 142 50.0
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 3.7e-25 118.6 139 49.6
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 4.9e-25 118.2 149 51.0
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 6.4e-25 117.9 172 45.9
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 6.4e-25 117.9 160 44.4
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 8.4e-25 117.5 148 44.6
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 8.4e-25 117.5 138 52.9
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 1.1e-24 117.1 142 49.3
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 1.1e-24 117.1 140 49.3
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 1.1e-24 117.1 162 46.3
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 1.9e-24 116.3 153 46.4
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 3.2e-24 115.5 137 50.4
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 3.2e-24 115.5 138 51.4
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 4.1e-24 115.2 144 45.8
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 5.4e-24 114.8 148 45.9
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 7.1e-24 114.4 189 44.4
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 7.1e-24 114.4 156 46.2
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 7.1e-24 114.4 198 42.9
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 9.2e-24 114.0 125 51.2
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.2e-23 113.6 136 50.7
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 2.1e-23 112.8 167 46.7
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 4.6e-23 111.7 170 44.1
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 4.6e-23 111.7 212 42.0
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 4.6e-23 111.7 145 46.9
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 6.0e-23 111.3 164 42.1
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 1.7e-22 109.8 158 43.0
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 2.3e-22 109.4 127 48.0
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 2.3e-22 109.4 145 46.2
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.9e-22 108.6 175 44.0
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 1.1e-21 107.1 150 48.7
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 2.5e-21 105.9 110 52.7
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 4.3e-21 105.1 144 43.1
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 9.6e-21 104.0 81 69.1
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 9.6e-21 104.0 175 42.3
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 2.1e-20 102.8 150 42.0
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 3.6e-20 102.1 172 41.3
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 6.8e-19 97.8 145 45.5
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 6.8e-19 97.8 174 41.4
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 8.9e-19 97.4 161 44.7
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 3.4e-18 95.5 144 40.3
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 4.4e-18 95.1 141 41.1
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 8.4e-17 90.9 120 52.5
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 9.3e-16 87.4 209 35.4
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 6.0e-15 84.7 135 40.0
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 3.0e-14 82.4 106 47.2
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 3.0e-14 82.4 106 47.2
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 3.9e-14 82.0 69 63.8
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 9.6e-13 77.4 168 33.9
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 2.8e-12 75.9 143 39.2
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 3.6e-12 75.5 163 38.0
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 8.1e-12 74.3 63 61.9
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 8.1e-12 74.3 161 36.0
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 1.1e-11 73.9 63 61.9
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 8.4e-09 64.3 144 36.1
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 7.1e-08 61.2 35 74.3
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.2e-07 60.5 96 46.9
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 4.6e-07 58.5 47 59.6


User provided reference genes

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