Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 5.0e-152 541.2 295 100.0
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 2.4e-82 309.7 279 62.0
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 1.3e-80 303.9 285 61.4
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 1.8e-77 293.5 294 58.8
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 8.4e-75 284.6 284 57.0
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 2.1e-73 280.0 265 59.2
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 4.6e-73 278.9 228 66.7
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 3.9e-72 275.8 225 65.8
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 5.1e-72 275.4 225 64.9
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 6.6e-72 275.0 278 58.3
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 1.1e-71 274.2 224 64.7
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 1.9e-71 273.5 228 65.4
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 3.3e-71 272.7 262 59.9
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 4.3e-71 272.3 225 65.3
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 5.6e-71 271.9 283 54.8
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 9.6e-71 271.2 225 66.2
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 2.8e-70 269.6 226 65.0
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 4.8e-70 268.9 221 64.7
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 8.1e-70 268.1 228 61.0
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 8.1e-70 268.1 224 62.5
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 1.4e-69 267.3 225 63.6
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 1.8e-69 266.9 281 54.1
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 5.3e-69 265.4 218 64.7
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.5e-68 263.8 220 65.0
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 2.0e-68 263.5 225 63.6
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 2.0e-68 263.5 222 65.8
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 2.0e-68 263.5 223 62.8
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 7.6e-68 261.5 289 53.3
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 9.9e-68 261.2 225 64.0
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 1.3e-67 260.8 225 62.2
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 1.3e-67 260.8 197 68.5
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 2.9e-67 259.6 232 61.6
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 3.8e-67 259.2 239 59.8
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 8.4e-67 258.1 192 69.8
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 3.2e-66 256.1 220 62.7
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 5.4e-66 255.4 221 63.3
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 1.2e-65 254.2 252 54.4
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 1.6e-65 253.8 232 60.3
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 2.7e-65 253.1 220 60.9
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 4.6e-65 252.3 226 59.3
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 7.9e-65 251.5 195 67.2
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 1.0e-64 251.1 233 61.8
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 1.3e-64 250.8 222 59.9
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 1.3e-64 250.8 223 59.6
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 2.3e-64 250.0 223 59.6
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 3.9e-64 249.2 233 61.8
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 5.1e-64 248.8 275 52.4
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 8.7e-64 248.1 226 59.7
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.1e-63 247.7 224 59.8
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 3.3e-63 246.1 224 58.9
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 7.4e-63 245.0 224 58.9
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 1.4e-61 240.7 225 56.4
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 3.1e-61 239.6 224 55.8
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 4.0e-61 239.2 204 60.8
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 9.0e-61 238.0 225 58.7
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.5e-60 237.3 225 55.6
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 2.0e-60 236.9 283 51.9
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 3.4e-60 236.1 265 50.9
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 5.8e-60 235.3 228 58.3
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 7.6e-60 235.0 226 57.5
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 7.6e-60 235.0 287 50.5
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 9.9e-60 234.6 233 57.9
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.3e-59 234.2 224 59.8
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 2.2e-59 233.4 201 60.7
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 3.8e-59 232.6 292 46.6
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 3.8e-59 232.6 225 54.7
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 3.8e-59 232.6 225 56.0
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 4.9e-59 232.3 226 56.2
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 8.4e-59 231.5 225 54.2
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 1.1e-58 231.1 227 54.2
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 1.1e-58 231.1 229 55.0
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 3.2e-58 229.6 223 54.3
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 4.2e-58 229.2 220 55.5
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 9.3e-58 228.0 226 54.9
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 1.2e-57 227.6 226 55.3
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 1.6e-57 227.3 226 54.9
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 1.6e-57 227.3 226 54.9
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 2.1e-57 226.9 227 53.7
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 3.5e-57 226.1 227 53.3
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 4.6e-57 225.7 264 49.6
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 7.9e-57 224.9 237 55.7
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 7.9e-57 224.9 227 54.6
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 7.9e-57 224.9 226 53.5
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 1.3e-56 224.2 228 54.8
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 1.8e-56 223.8 223 53.8
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 2.3e-56 223.4 224 54.9
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 2.3e-56 223.4 224 54.9
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 5.1e-56 222.2 225 57.3
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 6.7e-56 221.9 227 52.9
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 1.5e-55 220.7 223 54.3
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 3.3e-55 219.5 226 54.4
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 5.6e-55 218.8 266 49.6
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 9.6e-55 218.0 198 56.6
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 6.2e-54 215.3 193 57.5
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 8.2e-54 214.9 227 52.9
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.5e-52 210.7 185 62.2
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 1.5e-52 210.7 196 57.7
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 4.5e-52 209.1 191 59.7
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 6.1e-49 198.7 173 60.7
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 2.3e-48 196.8 225 49.8
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 7.4e-47 191.8 191 53.4
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 2.8e-46 189.9 167 61.7
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 1.3e-43 181.0 289 42.6
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 7.2e-42 175.3 191 49.2
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 2.1e-41 173.7 188 49.5
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 7.7e-36 155.2 225 44.9
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 3.2e-34 149.8 225 43.6
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 2.1e-33 147.1 220 37.7
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 7.9e-33 145.2 85 81.2
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 5.1e-32 142.5 215 40.0
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 5.7e-31 139.0 82 81.7
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 7.0e-29 132.1 179 44.1
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 7.7e-28 128.6 108 63.9
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 1.1e-26 124.8 125 52.0
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 9.4e-26 121.7 202 34.7
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 9.4e-26 121.7 219 33.3
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 8.0e-25 118.6 132 50.0
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 1.0e-24 118.2 109 55.0
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 2.3e-24 117.1 106 53.8
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 3.0e-24 116.7 109 54.1
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 2.0e-23 114.0 187 35.8
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 3.1e-21 106.7 69 71.0
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 2.9e-19 100.1 183 32.8
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 2.1e-17 94.0 106 45.3
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 3.7e-14 83.2 109 45.0
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 7.0e-13 79.0 125 38.4
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 4.5e-12 76.3 198 29.3
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 3.8e-11 73.2 90 48.9
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.4e-08 64.7 84 50.0
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 2.3e-08 63.9 83 51.8


User provided reference genes

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