Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 0.0e+00 1238.4 603 100.0
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 3.6e-189 665.6 583 59.5
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 4.2e-182 642.1 612 55.1
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 3.6e-181 639.0 595 56.1
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 2.6e-179 632.9 597 55.4
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 1.7e-178 630.2 605 54.0
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 2.2e-175 619.8 596 55.9
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 3.6e-173 612.5 601 54.1
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 1.2e-171 607.4 596 55.0
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 9.1e-169 597.8 597 52.4
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 2.3e-167 593.2 621 52.2
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 5.0e-167 592.0 597 51.8
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.1e-166 590.9 599 53.3
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 6.1e-165 585.1 597 51.1
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 8.0e-165 584.7 604 51.2
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 2.3e-164 583.2 609 51.6
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 4.5e-160 568.9 596 51.3
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 5.9e-160 568.5 595 51.1
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 1.0e-159 567.8 598 52.2
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 6.6e-159 565.1 600 50.7
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.1e-158 564.3 602 50.8
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 1.6e-157 560.5 603 47.9
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.6e-157 560.5 605 50.9
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 2.1e-157 560.1 603 48.1
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 2.1e-157 560.1 595 50.8
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 2.8e-157 559.7 590 50.8
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 8.0e-157 558.1 633 47.2
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 8.0e-157 558.1 602 52.0
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.8e-156 557.0 594 49.8
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 1.8e-156 557.0 606 50.3
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 7.5e-155 551.6 602 49.8
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 2.9e-154 549.7 552 52.5
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.9e-153 547.0 605 50.2
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 9.2e-153 544.7 595 49.7
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 7.8e-152 541.6 599 50.3
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 1.3e-151 540.8 588 50.3
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 1.7e-151 540.4 603 50.1
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 2.2e-146 523.5 597 48.6
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 4.9e-146 522.3 596 47.8
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 4.6e-144 515.8 591 46.9
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.9e-142 510.4 606 46.2
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 2.1e-141 506.9 592 47.6
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.1e-140 504.6 539 50.1
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 2.3e-140 503.4 603 46.1
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 7.6e-139 498.4 602 45.3
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 7.6e-139 498.4 598 45.3
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 3.7e-138 496.1 600 45.8
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 4.9e-138 495.7 598 46.2
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 2.4e-137 493.4 594 47.8
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 7.1e-137 491.9 597 44.9
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 9.2e-137 491.5 596 46.1
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 1.3e-135 487.6 595 46.1
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 1.3e-135 487.6 594 47.6
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 1.3e-135 487.6 594 46.3
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 2.3e-135 486.9 639 44.9
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 1.1e-134 484.6 595 45.9
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.9e-134 483.8 608 46.4
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 7.3e-134 481.9 596 44.3
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.2e-133 481.1 596 44.8
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 1.6e-133 480.7 605 44.8
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.8e-133 479.9 600 45.2
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 4.7e-133 479.2 592 44.4
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 3.1e-132 476.5 599 44.9
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 1.2e-131 474.6 593 45.4
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 2.0e-131 473.8 607 45.6
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 9.9e-131 471.5 597 45.6
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 1.3e-130 471.1 596 43.8
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.9e-130 469.9 598 44.3
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 4.9e-130 469.2 463 54.9
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 6.0e-128 462.2 599 45.4
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 1.5e-126 457.6 608 43.9
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 4.0e-124 449.5 601 43.8
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.5e-123 447.6 453 54.3
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 9.9e-123 444.9 462 51.5
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 2.2e-122 443.7 589 44.1
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.9e-121 440.7 598 44.1
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.7e-119 434.1 600 42.7
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 3.0e-119 433.3 598 42.3
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 3.0e-119 433.3 602 42.7
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 3.9e-119 433.0 606 40.6
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 3.3e-118 429.9 596 42.4
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 3.3e-118 429.9 594 42.3
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 1.3e-117 427.9 590 42.4
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 2.8e-117 426.8 590 42.7
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 1.4e-116 424.5 590 42.2
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.2e-115 421.4 590 42.5
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.2e-115 421.4 590 42.5
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 1.2e-112 411.4 588 40.8
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 1.5e-110 404.4 619 40.4
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.6e-109 401.0 425 49.9
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 9.0e-108 395.2 426 49.1
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 3.8e-106 389.8 590 41.5
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 6.0e-104 382.5 430 47.4
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 6.2e-101 372.5 555 42.3
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 2.9e-98 363.6 595 39.5
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 1.9e-94 350.9 380 52.1
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 4.3e-94 349.7 459 45.5
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.0e-87 328.6 425 45.6
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 3.0e-71 273.9 186 69.4
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 4.0e-71 273.5 603 32.7
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 3.2e-65 253.8 244 51.2
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 8.8e-63 245.7 646 28.5
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.2e-61 241.1 158 77.8
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.8e-60 238.0 148 75.0
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.6e-59 235.0 268 46.3
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 4.0e-55 220.3 549 29.9
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 5.7e-54 216.5 624 28.8
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 2.9e-45 187.6 135 65.2
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.2e-43 182.2 130 65.4
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 1.6e-40 171.8 488 24.6
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 2.7e-35 154.5 190 44.2
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 2.9e-29 134.4 435 27.4
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 2.8e-24 117.9 345 26.7
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 5.2e-23 113.6 170 41.2
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.5e-17 95.5 81 54.3
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.6e-17 93.6 78 55.1
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 3.6e-16 90.9 74 55.4
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 1.7e-10 72.0 78 53.8
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 9.6e-09 66.2 43 69.8
MBI14_g29303_MAGBIO Magnolia biondii HOM05D002382 ORTHO05D002622 1.6e-08 65.5 64 50.0
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 4.8e-08 63.9 95 31.6


User provided reference genes

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