Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 2.8e-174 615.1 307 100.0
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 6.7e-83 311.6 281 59.8
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 6.5e-70 268.5 289 52.2
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 7.2e-69 265.0 295 53.2
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 1.2e-68 264.2 291 54.3
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 7.9e-68 261.5 292 51.4
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 1.6e-65 253.8 268 55.2
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 1.4e-64 250.8 274 53.3
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 3.4e-63 246.1 283 50.5
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 8.8e-59 231.5 230 57.4
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 2.0e-58 230.3 296 49.0
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 9.7e-58 228.0 292 45.9
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 8.2e-57 224.9 244 51.6
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 1.4e-56 224.2 294 45.6
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 1.2e-55 221.1 294 46.6
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 6.5e-54 215.3 350 40.9
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 1.1e-53 214.5 230 53.0
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 1.9e-53 213.8 254 50.0
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 4.2e-53 212.6 290 46.2
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 2.1e-52 210.3 297 43.8
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 4.7e-52 209.1 296 44.9
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 6.1e-52 208.8 250 51.2
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 6.1e-52 208.8 251 50.6
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 7.9e-52 208.4 262 50.8
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 2.3e-51 206.8 288 46.2
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 2.3e-51 206.8 251 50.2
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 1.5e-50 204.1 244 48.8
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 4.2e-45 186.0 243 44.4
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 1.6e-44 184.1 301 42.5
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 4.0e-43 179.5 265 41.5
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 1.4e-40 171.0 266 40.2
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 7.0e-40 168.7 254 41.3
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 4.5e-39 166.0 201 50.7
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 5.9e-39 165.6 250 44.4
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 5.2e-35 152.5 163 50.3
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 1.2e-34 151.4 243 39.1
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 1.5e-34 151.0 173 53.8
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 1.5e-29 134.4 107 63.6
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 5.5e-29 132.5 251 37.5
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 2.7e-23 113.6 243 35.8
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 5.9e-23 112.5 250 32.4
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 5.2e-19 99.4 245 30.6
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 2.0e-18 97.4 88 50.0
Sp6g07500 Schrenkiella parvula HOM05D012304 ORTHO05D010377 3.4e-18 96.7 247 28.7
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 1.3e-17 94.7 241 31.5
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 2.2e-17 94.0 238 29.4
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 8.3e-17 92.0 250 29.2
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 1.0e-14 85.1 238 29.0
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 8.6e-14 82.0 232 28.9
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 1.2e-12 78.2 289 27.0
BcaB05g23938 Brassica carinata HOM05D012304 ORTHO05D010377 1.8e-11 74.3 272 26.8
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 1.8e-11 74.3 124 39.5
Pp3c3_11780 Physcomitrium patens HOM05D020309 ORTHO05D010377 7.5e-10 68.9 313 25.6
AagrBONN_evm.TU.Sc2ySwM_368.552 Anthoceros agrestis HOM05D020309 ORTHO05D010377 9.8e-10 68.6 280 24.3
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 7.0e-08 62.4 49 61.2
BolSC33t60634H Brassica oleracea HOM05D012304 ORTHO05D010377 3.5e-07 60.1 294 23.8
CARHR260950 Cardamine hirsuta HOM05D012304 ORTHO05D010377 5.0e-06 56.2 119 29.4


User provided reference genes

Program Settings