Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0948 Trochodendron aralioides HOM05D008201 ORTHO05D005639 2.8e-65 252.7 234 100.0
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 3.9e-35 152.5 167 69.5
Dinv39575 Davidia involucrata HOM05D008201 ORTHO05D005639 1.7e-22 110.5 176 71.6
Dinv31918 Davidia involucrata HOM05D008201 ORTHO05D005639 2.1e-20 103.6 179 66.5
TAR381G0904 Trochodendron aralioides HOM05D008201 ORTHO05D005639 1.8e-16 90.5 186 62.9
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 4.1e-16 89.4 190 51.6
Oeu046328.1 Olea europaea HOM05D014976 ORTHO05D005639 5.4e-16 89.0 150 71.3
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 5.9e-15 85.5 180 67.8
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 1.7e-14 84.0 167 53.9
Gohir.A01G107800 Gossypium hirsutum HOM05D008201 ORTHO05D005639 6.5e-14 82.0 161 47.2
Hma1.2p1_1100F.1_g257080 Hydrangea macrophylla HOM05D008201 ORTHO05D005639 4.2e-13 79.3 183 54.6
Actinidia17030 Actinidia chinensis HOM05D000356 ORTHO05D000265 5.5e-13 79.0 174 56.9
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 2.1e-12 77.0 176 47.2
Gohir.D01G094300 Gossypium hirsutum HOM05D008201 ORTHO05D005639 2.1e-12 77.0 160 43.8
Prupe.1G356400 Prunus persica HOM05D008201 ORTHO05D005639 2.8e-12 76.6 171 53.8
Nn6g31832 Nelumbo nucifera HOM05D008201 ORTHO05D005639 3.6e-12 76.3 186 57.5
TWI36G0214 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 1.8e-11 73.9 172 61.6
Gorai.002G119600 Gossypium raimondii HOM05D008201 ORTHO05D005639 5.2e-11 72.4 160 41.9
HanXRQChr08g0216051 Helianthus annuus HOM05D008201 ORTHO05D005639 8.8e-11 71.6 157 54.8
Sabra05G0191700 Salix brachista HOM05D008201 ORTHO05D005639 8.8e-11 71.6 170 40.0
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 1.2e-10 71.2 165 38.8
Gohir.A05G181000 Gossypium hirsutum HOM05D008201 ORTHO05D005639 1.5e-10 70.9 170 55.3
Gorai.009G189500 Gossypium raimondii HOM05D008201 ORTHO05D005639 9.8e-10 68.2 145 59.3
QL11p053458 Quercus lobata HOM05D021524 ORTHO05D013106 9.8e-10 68.2 62 62.9
Haze_02059 Corylus avellana HOM05D021524 ORTHO05D013106 2.2e-09 67.0 62 61.3
Duzib116G0781 Durio zibethinus HOM05D008201 ORTHO05D005639 2.8e-09 66.6 149 64.4
Lalb_Chr19g0131701 Lupinus albus HOM05D008201 ORTHO05D005639 4.9e-09 65.9 168 60.1
Oeu016882.1 Olea europaea HOM05D008201 ORTHO05D005639 6.3e-09 65.5 151 62.3
Duzib041G0568 Durio zibethinus HOM05D008201 ORTHO05D005639 8.3e-09 65.1 144 67.4
FAN15G2778 Fragaria x ananassa HOM05D008201 ORTHO05D005639 8.3e-09 65.1 219 47.0
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 1.1e-08 64.7 137 55.5
CiPaw.07G140900 Carya illinoinensis HOM05D008201 ORTHO05D005639 1.4e-08 64.3 182 59.3
Haze_22743 Corylus avellana HOM05D025300 ORTHO05D005639 5.4e-08 62.4 268 38.8
FAN27G2977 Fragaria x ananassa HOM05D008201 ORTHO05D005639 5.4e-08 62.4 222 52.7
TWI12G0216 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 5.4e-08 62.4 166 55.4
Rhsim07G0253800 Rhododendron simsii HOM05D008201 ORTHO05D005639 9.2e-08 61.6 169 50.3
Sed0012310 Sechium edule HOM05D024756 ORTHO05D005639 9.2e-08 61.6 187 56.1
Glyma.04G009400 Glycine max HOM05D008201 ORTHO05D005639 1.6e-07 60.8 166 52.4
CiPaw.05G087800 Carya illinoinensis HOM05D021524 ORTHO05D013106 2.0e-07 60.5 61 54.1
Ciclev10002349m.g Citrus clementina HOM05D008201 ORTHO05D005639 2.0e-07 60.5 64 59.4
COL.COLO4_21609 Corchorus olitorius HOM05D008201 ORTHO05D005639 2.0e-07 60.5 59 59.3
FAN20G0338 Fragaria x ananassa HOM05D008201 ORTHO05D005639 2.7e-07 60.1 221 45.2
Cfa014040 Carpinus fangiana HOM05D025300 ORTHO05D005639 3.5e-07 59.7 223 44.4
Ciclev10029952m.g Citrus clementina HOM05D021524 ORTHO05D013106 4.5e-07 59.3 155 34.2
Duzib093G2238 Durio zibethinus HOM05D008201 ORTHO05D005639 4.5e-07 59.3 49 63.3
Actinidia18018 Actinidia chinensis HOM05D000199 ORTHO05D001039 7.8e-07 58.5 171 43.9
Sc02g0008990 Simmondsia chinensis HOM05D017236 ORTHO05D005639 7.8e-07 58.5 188 54.8
vmacro04391 Vaccinium macrocarpon HOM05D008201 ORTHO05D005639 7.8e-07 58.5 158 55.1
MSTRG.1124 Avicennia marina HOM05D008201 ORTHO05D005639 1.7e-06 57.4 59 57.6
Lsat_1_v5_gn_8_27820 Lactuca sativa HOM05D008201 ORTHO05D005639 2.3e-06 57.0 175 42.9
PGR083G0607 Punica granatum HOM05D008201 ORTHO05D005639 2.3e-06 57.0 173 58.4
TAR381G0320 Trochodendron aralioides HOM05D008201 ORTHO05D005639 2.3e-06 57.0 44 65.9
Eucgr.F01726 Eucalyptus grandis HOM05D008201 ORTHO05D005639 2.9e-06 56.6 170 32.4
Lj1g0003360 Lotus japonicus HOM05D015205 ORTHO05D005639 2.9e-06 56.6 161 49.1
Nitab4.5_0000588g0250 Nicotiana tabacum HOM05D014976 ORTHO05D005639 3.8e-06 56.2 163 50.9
QL02p013717 Quercus lobata HOM05D008201 ORTHO05D005639 5.0e-06 55.8 92 46.7
SalBow7G0401 Salvia bowleyana HOM05D008201 ORTHO05D005639 6.6e-06 55.5 145 71.0


User provided reference genes

Program Settings