Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0903 Trochodendron aralioides HOM05D009338 ORTHO05D010862 3.9e-35 151.0 80 100.0
Gohir.D02G235400 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.7e-14 82.4 81 55.6
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 2.9e-14 81.6 81 61.7
Gohir.A03G213900 Gossypium hirsutum HOM05D009338 ORTHO05D010862 5.0e-14 80.9 81 55.6
Gorai.005G263500 Gossypium raimondii HOM05D009338 ORTHO05D010862 3.2e-13 78.2 81 54.3
Thecc.02G028800 Theobroma cacao HOM05D009338 ORTHO05D010862 8.0e-12 73.6 81 49.4
Manes.17G096800 Manihot esculenta HOM05D009338 ORTHO05D010862 1.1e-10 69.7 80 48.8
Potri.009G109200 Populus trichocarpa HOM05D009338 ORTHO05D010862 2.6e-10 68.6 81 50.6
Gohir.A03G214000 Gossypium hirsutum HOM05D009338 ORTHO05D010862 3.3e-10 68.2 81 46.9
Nn5g29412 Nelumbo nucifera HOM05D009338 ORTHO05D010862 3.3e-10 68.2 82 51.2
Potri.004G148100 Populus trichocarpa HOM05D009338 ORTHO05D010862 7.5e-10 67.0 81 51.9
CSS0015548 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 1.7e-09 65.9 82 50.0
Gorai.005G263600 Gossypium raimondii HOM05D009338 ORTHO05D010862 2.8e-09 65.1 81 45.7
QL11p039270 Quercus lobata HOM05D009338 ORTHO05D010862 2.8e-09 65.1 82 53.7
Gohir.D02G235500 Gossypium hirsutum HOM05D009338 ORTHO05D010862 3.7e-09 64.7 81 45.7
Potri.004G147966 Populus trichocarpa HOM05D009338 ORTHO05D010862 8.2e-09 63.5 80 50.0
Haze_02460 Corylus avellana HOM05D009338 ORTHO05D010862 1.1e-08 63.2 80 50.0
Thecc.02G028900 Theobroma cacao HOM05D009338 ORTHO05D010862 2.4e-08 62.0 84 50.0
Sabra09G0083400 Salix brachista HOM05D009338 ORTHO05D010862 4.1e-08 61.2 85 43.5
CSS0004539 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 7.0e-08 60.5 82 50.0
Cfa004949 Carpinus fangiana HOM05D009338 ORTHO05D010862 1.2e-07 59.7 80 42.5
Manes.17G096700 Manihot esculenta HOM05D009338 ORTHO05D010862 2.7e-07 58.5 80 46.2
arahy.Tifrunner.gnm1.ann1.GM2IDW Arachis hypogaea HOM05D016074 ORTHO05D010862 3.5e-07 58.2 80 41.2
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 3.5e-07 58.2 77 44.2
DCAR_029008 Daucus carota HOM05D009338 ORTHO05D010862 5.9e-07 57.4 85 45.9
Psat7g207480 Pisum sativum HOM05D016074 ORTHO05D010862 7.7e-07 57.0 80 45.0
Oeu003709.2 Olea europaea HOM05D060135 ORTHO05D010862 1.7e-06 55.8 85 44.7
Phvul.011G050200 Phaseolus vulgaris HOM05D016074 ORTHO05D010862 1.7e-06 55.8 81 40.7
Glyma.12G048100 Glycine max HOM05D016074 ORTHO05D010862 3.8e-06 54.7 80 37.5
arahy.Tifrunner.gnm1.ann1.JPY1I2 Arachis hypogaea HOM05D016074 ORTHO05D010862 6.5e-06 53.9 80 40.0
Lalb_Chr01g0002981 Lupinus albus HOM05D016074 ORTHO05D010862 8.5e-06 53.5 80 42.5
Rhsim11G0170900 Rhododendron simsii HOM05D009338 ORTHO05D010862 8.5e-06 53.5 83 43.4


User provided reference genes

Program Settings