Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 6.4e-249 863.6 433 100.0
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 5.0e-169 598.2 430 69.5
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 1.3e-153 547.0 434 61.8
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 6.6e-145 518.1 433 59.4
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.6e-143 513.5 417 62.1
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 1.8e-142 510.0 427 60.0
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 1.2e-138 497.3 426 56.6
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 2.1e-138 496.5 426 57.3
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 5.1e-137 491.9 431 58.2
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 2.6e-133 479.6 427 55.7
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 5.8e-133 478.4 427 56.0
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 1.3e-132 477.2 443 55.5
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 7.1e-131 471.5 404 58.4
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 1.2e-130 470.7 431 53.8
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 5.1e-129 465.3 458 53.5
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 1.5e-128 463.8 426 54.2
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 1.5e-128 463.8 441 54.0
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 4.3e-128 462.2 430 55.1
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 4.3e-128 462.2 439 54.7
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 6.9e-126 454.9 435 53.6
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.7e-124 450.3 430 55.8
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 6.4e-124 448.4 431 55.2
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 1.4e-123 447.2 436 53.9
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 2.1e-122 443.4 432 53.9
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 3.5e-122 442.6 432 53.0
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 3.9e-121 439.1 427 51.5
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 5.6e-120 435.3 430 53.5
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 9.6e-120 434.5 431 51.3
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 1.3e-119 434.1 428 50.9
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 3.7e-119 432.6 429 52.9
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 1.8e-118 430.3 431 52.4
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 9.0e-118 427.9 427 50.1
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 7.6e-117 424.9 432 50.5
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 6.0e-114 415.2 423 51.8
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 1.3e-113 414.1 431 50.6
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 1.3e-113 414.1 429 50.8
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 2.3e-113 413.3 431 50.3
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 6.7e-113 411.8 424 50.2
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 9.6e-112 407.9 359 56.5
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 3.7e-111 406.0 425 49.4
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 8.2e-111 404.8 430 48.6
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.4e-110 404.1 379 54.6
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 9.0e-110 401.4 430 49.3
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 2.2e-108 396.7 424 49.1
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 6.5e-108 395.2 433 47.6
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 1.9e-107 393.7 397 52.1
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 7.9e-106 388.3 454 47.1
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 2.3e-105 386.7 396 51.3
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 5.7e-104 382.1 425 49.6
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 5.7e-104 382.1 511 42.7
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 2.2e-103 380.2 374 53.5
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 6.3e-103 378.6 426 46.2
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 7.7e-101 371.7 426 45.8
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 7.2e-99 365.2 393 48.6
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 2.3e-97 360.1 378 50.0
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 3.7e-95 352.8 444 49.1
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 6.9e-94 348.6 439 44.4
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 4.2e-91 339.3 428 43.2
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 7.9e-90 335.1 383 46.0
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 1.7e-87 327.4 344 50.3
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.4e-86 324.3 310 54.2
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 1.2e-85 321.2 453 42.8
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 7.7e-85 318.5 377 45.1
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 8.5e-84 315.1 254 61.0
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 1.5e-80 304.3 454 41.0
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 3.3e-80 303.1 445 40.2
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 1.3e-76 291.2 423 41.4
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.1e-66 257.3 205 63.9
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 3.4e-64 250.0 269 47.2
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 4.9e-63 246.1 327 42.2
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 1.3e-60 238.0 261 45.6
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.9e-59 234.2 209 54.5
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 6.8e-57 225.7 222 52.3
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.0e-56 224.2 323 44.6
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 4.6e-45 186.4 163 55.8
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 1.5e-32 144.8 258 33.7
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.9e-30 137.9 155 45.2
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 6.0e-29 132.9 146 52.1
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 1.9e-27 127.9 87 70.1
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 2.7e-21 107.5 86 65.1
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 3.3e-19 100.5 77 59.7
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 7.1e-14 82.8 180 32.2
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 9.6e-11 72.4 219 25.6
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 2.1e-10 71.2 37 89.2
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 4.8e-10 70.1 146 31.5


User provided reference genes

Program Settings