Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 1.0e-54 216.5 106 100.0
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 6.3e-41 170.6 96 82.3
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 1.1e-40 169.9 96 82.3
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 4.1e-40 167.9 95 81.1
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 4.1e-40 167.9 92 84.8
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 9.2e-40 166.8 98 78.6
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.6e-39 166.0 96 79.2
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.0e-39 165.6 95 78.9
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.0e-39 165.6 95 78.9
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 5.9e-39 164.1 92 79.3
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.3e-38 162.9 103 73.8
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 5.0e-38 161.0 92 79.3
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 5.0e-38 161.0 102 75.5
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 6.6e-38 160.6 92 80.4
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.1e-37 159.8 103 72.8
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.1e-37 159.8 101 74.3
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.1e-37 159.8 96 77.1
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-37 159.5 99 72.7
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-37 159.5 99 72.7
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-37 159.5 99 72.7
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.5e-37 158.7 96 76.0
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 3.3e-37 158.3 93 77.4
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 3.3e-37 158.3 93 77.4
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 4.3e-37 157.9 92 73.9
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 7.3e-37 157.1 96 72.9
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 7.3e-37 157.1 94 75.5
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.2e-36 156.4 92 72.8
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.6e-36 156.0 96 71.9
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.6e-36 156.0 96 72.9
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 2.1e-36 155.6 91 78.0
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 2.8e-36 155.2 96 74.0
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.8e-36 155.2 98 74.5
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 2.8e-36 155.2 96 71.9
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 2.8e-36 155.2 98 72.4
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.8e-36 155.2 102 74.5
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.8e-36 155.2 102 74.5
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 3.6e-36 154.8 96 70.8
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 3.6e-36 154.8 96 75.0
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 4.7e-36 154.5 98 71.4
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 6.1e-36 154.1 104 71.2
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 8.0e-36 153.7 101 70.3
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 8.0e-36 153.7 93 75.3
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 8.0e-36 153.7 92 75.0
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 1.0e-35 153.3 94 73.4
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.0e-35 153.3 96 70.8
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.0e-35 153.3 98 72.4
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.4e-35 152.9 102 71.6
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 1.4e-35 152.9 100 70.0
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 1.8e-35 152.5 97 73.2
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 2.3e-35 152.1 93 73.1
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 4.0e-35 151.4 97 72.2
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 8.9e-35 150.2 101 70.3
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.5e-34 149.4 94 74.5
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 1.5e-34 149.4 104 67.3
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 2.0e-34 149.1 103 69.9
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 2.6e-34 148.7 97 71.1
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 4.4e-34 147.9 92 72.8
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 5.7e-34 147.5 92 71.7
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 5.7e-34 147.5 93 71.0
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 5.7e-34 147.5 98 65.3
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 7.5e-34 147.1 92 72.8
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 9.8e-34 146.7 101 70.3
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 9.8e-34 146.7 108 63.0
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.3e-33 146.4 101 71.3
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 1.3e-33 146.4 101 67.3
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.7e-33 146.0 92 69.6
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 2.2e-33 145.6 92 72.8
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 2.9e-33 145.2 94 70.2
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 2.9e-33 145.2 95 71.6
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 3.7e-33 144.8 95 71.6
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 6.4e-33 144.1 89 73.0
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 1.1e-32 143.3 92 70.7
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 1.1e-32 143.3 92 70.7
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 1.4e-32 142.9 92 70.7
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 2.4e-32 142.1 92 69.6
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 4.1e-32 141.4 94 69.1
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 4.1e-32 141.4 92 69.6
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 4.1e-32 141.4 105 65.7
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 4.1e-32 141.4 92 67.4
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.2e-31 139.8 92 68.5
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 2.7e-31 138.7 91 69.2
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 3.5e-31 138.3 92 65.2
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 3.5e-31 138.3 102 65.7
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 1.3e-30 136.3 90 65.6
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.3e-30 136.3 96 63.5
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 3.9e-30 134.8 90 65.6
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 3.9e-30 134.8 90 65.6
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 5.0e-30 134.4 92 64.1
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 6.6e-30 134.0 131 51.9
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 1.5e-29 132.9 100 64.0
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.9e-29 132.5 96 61.5
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.9e-29 132.5 90 64.4
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.5e-29 132.1 92 63.0
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 5.6e-29 131.0 92 62.0
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 9.5e-29 130.2 90 62.2
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 4.7e-28 127.9 90 63.3
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 1.0e-27 126.7 96 59.4
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 2.3e-27 125.6 81 72.8
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 8.9e-27 123.6 80 73.8
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 4.4e-26 121.3 77 71.4
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 2.9e-25 118.6 87 67.8
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 8.3e-25 117.1 85 67.1
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.4e-24 116.3 59 89.8
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 9.2e-24 113.6 59 83.1
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 1.2e-20 103.2 64 73.4
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 3.6e-20 101.7 73 68.5
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 8.1e-20 100.5 69 66.7
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 1.8e-19 99.4 105 45.7
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 8.9e-19 97.1 96 46.9
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 1.5e-18 96.3 102 46.1
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 5.8e-18 94.4 112 42.0
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 9.8e-18 93.6 85 56.5
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 7.8e-15 84.0 100 50.0
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.0e-14 83.6 59 57.6
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 8.6e-14 80.5 85 43.5
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.6e-12 75.1 56 66.1
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 6.8e-11 70.9 67 47.8
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 6.8e-11 70.9 64 53.1


User provided reference genes

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