Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 1.2e-98 363.2 191 100.0
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 5.1e-81 304.7 190 81.6
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.1e-81 304.7 191 81.2
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 6.6e-81 304.3 190 80.5
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 3.3e-80 302.0 194 78.9
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 4.3e-80 301.6 191 79.1
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 7.3e-80 300.8 194 78.9
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 2.1e-79 299.3 191 78.5
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 6.9e-78 294.3 206 74.3
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.0e-77 292.7 186 81.7
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.0e-77 292.7 186 81.7
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.0e-77 292.7 186 81.7
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 3.4e-77 292.0 197 78.7
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 5.8e-77 291.2 198 74.7
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 7.6e-77 290.8 198 74.2
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 7.6e-77 290.8 198 74.2
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 2.2e-76 289.3 192 75.5
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 8.4e-76 287.3 195 76.9
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 3.2e-75 285.4 195 74.4
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 5.4e-75 284.6 195 76.4
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 7.1e-75 284.3 195 76.4
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.1e-75 284.3 195 76.4
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 7.1e-75 284.3 193 75.6
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 9.3e-75 283.9 185 76.2
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.2e-74 283.5 195 76.4
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.6e-74 283.1 203 71.4
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.5e-74 282.0 193 82.4
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.5e-74 282.0 195 75.9
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 1.0e-73 280.4 189 75.1
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 1.7e-73 279.6 197 71.6
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.3e-73 279.3 195 72.8
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 3.0e-73 278.9 198 71.7
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.9e-73 278.5 193 73.6
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.9e-73 278.5 193 73.6
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 5.1e-73 278.1 194 73.7
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 6.6e-73 277.7 199 70.4
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 8.7e-73 277.3 202 71.8
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 1.1e-72 276.9 195 71.8
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.1e-72 276.9 199 71.4
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 1.9e-72 276.2 199 73.4
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 1.9e-72 276.2 184 73.4
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 1.9e-72 276.2 174 78.7
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 2.5e-72 275.8 183 74.9
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 3.3e-72 275.4 193 73.1
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 3.3e-72 275.4 201 69.7
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 4.3e-72 275.0 192 74.5
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 4.3e-72 275.0 198 72.2
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 5.6e-72 274.6 198 71.2
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 5.6e-72 274.6 198 71.2
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 7.3e-72 274.2 201 71.6
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 9.6e-72 273.9 198 73.2
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 1.3e-71 273.5 194 71.6
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.6e-71 273.1 194 71.6
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 1.6e-71 273.1 199 70.9
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 2.8e-71 272.3 192 71.9
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 3.6e-71 271.9 195 71.8
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 3.6e-71 271.9 198 69.7
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 4.8e-71 271.6 183 74.9
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 8.1e-71 270.8 198 70.7
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 8.1e-71 270.8 182 75.3
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 3.1e-70 268.9 198 70.7
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 4.0e-70 268.5 187 70.6
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 6.9e-70 267.7 182 74.7
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 9.0e-70 267.3 206 69.4
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 9.0e-70 267.3 199 69.3
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.5e-69 266.5 195 70.3
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.5e-69 266.5 187 71.1
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.5e-69 266.5 187 71.1
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.0e-69 266.2 205 68.3
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 1.3e-68 263.5 205 68.8
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.1e-67 260.4 193 70.5
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 7.1e-67 257.7 201 67.7
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.2e-66 256.9 182 70.9
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.8e-65 253.1 153 90.2
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 3.0e-65 252.3 191 68.1
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.1e-65 251.5 189 69.3
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 8.7e-65 250.8 195 68.7
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 3.3e-64 248.8 203 68.5
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 7.4e-64 247.7 184 69.6
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 1.6e-63 246.5 190 66.3
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 2.1e-63 246.1 198 65.2
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 4.8e-63 245.0 201 65.2
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 4.8e-63 245.0 201 65.2
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 4.8e-63 245.0 201 65.2
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 4.8e-63 245.0 201 65.2
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.4e-62 243.4 198 65.7
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 1.8e-62 243.0 202 66.3
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 3.1e-62 242.3 204 65.7
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 3.1e-62 242.3 204 65.7
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 4.0e-62 241.9 205 65.9
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 1.5e-61 240.0 201 65.2
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 2.0e-61 239.6 182 65.9
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 5.8e-61 238.0 193 66.3
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.2e-60 236.1 154 74.7
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.9e-60 235.7 172 69.8
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.8e-60 235.3 200 64.5
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 7.9e-58 227.6 204 62.7
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 2.8e-55 219.2 156 67.9
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.0e-49 200.7 182 56.0
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 2.8e-47 192.6 194 57.7
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.5e-45 186.8 187 50.8
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 6.1e-42 174.9 146 62.3
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 6.1e-42 174.9 182 49.5
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.9e-42 174.5 189 54.5
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 3.9e-41 172.2 180 48.3
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 6.7e-41 171.4 113 73.5
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 2.5e-40 169.5 113 73.5
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 4.5e-37 158.7 106 76.4
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.7e-33 144.8 187 49.2
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.0e-28 131.0 127 52.0
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 3.5e-21 105.9 131 53.4
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 5.2e-17 92.0 60 70.0
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.7e-13 79.7 71 60.6
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 7.2e-11 71.6 49 77.6
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 4.7e-10 68.9 46 73.9
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 8.3e-07 58.2 36 75.0


User provided reference genes

Program Settings