Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0632 Trochodendron aralioides HOM05D001705 ORTHO05D002725 8.0e-87 325.5 554 100.0
Nn5g29193 Nelumbo nucifera HOM05D001705 ORTHO05D002725 1.0e-49 202.2 547 86.3
Cfa006934 Carpinus fangiana HOM05D001705 ORTHO05D002725 5.3e-46 189.9 545 82.0
GSVIVG01018835001 Vitis vinifera HOM05D001705 ORTHO05D002725 2.9e-44 184.1 258 82.6
Aqoxy6G02406 Aquilegia oxysepala HOM05D001705 ORTHO05D002725 1.6e-42 178.3 542 85.1
Prupe.7G164400 Prunus persica HOM05D001705 ORTHO05D002725 1.6e-42 178.3 547 83.5
Potri.007G016700 Populus trichocarpa HOM05D001705 ORTHO05D002725 3.9e-41 173.7 545 84.2
Sabra05G0096800 Salix brachista HOM05D001705 ORTHO05D002725 8.7e-41 172.6 546 83.2
CiPaw.07G055300 Carya illinoinensis HOM05D001705 ORTHO05D002725 9.6e-40 169.1 547 83.0
Rhsim08G0036100 Rhododendron simsii HOM05D001705 ORTHO05D002725 6.2e-39 166.4 254 74.8
Thecc.01G024300 Theobroma cacao HOM05D001705 ORTHO05D002725 6.2e-39 166.4 547 84.3
CSS0005183 Camellia sinensis var. sinensis HOM05D001705 ORTHO05D002725 9.0e-38 162.5 258 81.0
Haze_03816 Corylus avellana HOM05D001705 ORTHO05D002725 2.0e-37 161.4 547 86.1
Duzib147G0685 Durio zibethinus HOM05D001705 ORTHO05D002725 3.4e-37 160.6 547 84.6
Sabra07G0013900 Salix brachista HOM05D001705 ORTHO05D002725 7.6e-37 159.5 545 83.3
vmacro22099 Vaccinium macrocarpon HOM05D001705 ORTHO05D002725 5.0e-36 156.8 547 81.4
Potri.005G117700 Populus trichocarpa HOM05D001705 ORTHO05D002725 1.9e-35 154.8 546 82.8
Manes.01G142200 Manihot esculenta HOM05D001705 ORTHO05D002725 3.2e-35 154.1 255 80.4
Cc07_g10340 Coffea canephora HOM05D001705 ORTHO05D002725 2.1e-34 151.4 547 81.2
COL.COLO4_21972 Corchorus olitorius HOM05D001705 ORTHO05D002725 2.1e-34 151.4 258 79.8
MD02G1136300 Malus domestica HOM05D004495 ORTHO05D005361 4.6e-34 150.2 544 79.6
Cpa.g.sc6.205 Carica papaya HOM05D001705 ORTHO05D002725 1.3e-33 148.7 256 80.1
Eucgr.I02373 Eucalyptus grandis HOM05D001705 ORTHO05D002725 2.3e-33 147.9 545 82.6
Dinv40050 Davidia involucrata HOM05D001705 ORTHO05D002725 6.7e-33 146.4 547 51.7
Phvul.003G258800 Phaseolus vulgaris HOM05D001705 ORTHO05D002725 4.3e-32 143.7 259 65.6
CAN.G358.8 Capsicum annuum HOM05D001705 ORTHO05D002725 9.7e-32 142.5 547 83.9
Gohir.A12G061400 Gossypium hirsutum HOM05D001705 ORTHO05D002725 1.6e-31 141.7 258 69.8
Oeu005148.1 Olea europaea HOM05D001705 ORTHO05D002725 1.6e-31 141.7 545 82.2
VMungo0251G2871 Vigna mungo HOM05D001705 ORTHO05D002725 1.6e-31 141.7 256 67.6
EL10Ac6g14594 Beta vulgaris HOM05D001705 ORTHO05D002725 2.8e-31 141.0 258 75.6
Gohir.D12G061500 Gossypium hirsutum HOM05D001705 ORTHO05D002725 6.3e-31 139.8 258 69.8
Gorai.008G064700 Gossypium raimondii HOM05D001705 ORTHO05D002725 6.3e-31 139.8 258 69.8
Nitab4.5_0004086g0010 Nicotiana tabacum HOM05D001705 ORTHO05D002725 1.1e-30 139.0 547 83.5
FvH4_1g12240 Fragaria vesca HOM05D001705 ORTHO05D002725 2.4e-30 137.9 547 71.8
Peaxi162Scf00083g01720 Petunia axillaris HOM05D001705 ORTHO05D002725 2.4e-30 137.9 258 78.3
MSTRG.2503 Avicennia marina HOM05D001705 ORTHO05D002725 3.1e-30 137.5 547 81.2
Migut.H02487 Erythranthe guttata HOM05D001705 ORTHO05D002725 5.3e-30 136.7 256 76.2
FAN19G2547 Fragaria x ananassa HOM05D004495 ORTHO05D005361 5.3e-30 136.7 258 54.7
PGSC0003DMG400003544 Solanum tuberosum HOM05D001705 ORTHO05D002725 3.4e-29 134.0 258 76.7
Sopen02g029270 Solanum pennellii HOM05D001705 ORTHO05D002725 4.5e-29 133.7 258 77.1
Glyma.16G131500 Glycine max HOM05D001705 ORTHO05D002725 3.8e-28 130.6 256 74.6
Nitab4.5_0002266g0090 Nicotiana tabacum HOM05D001705 ORTHO05D002725 1.1e-27 129.0 547 81.4
ClCG01G020070 Citrullus lanatus HOM05D001705 ORTHO05D002725 4.2e-27 127.1 258 65.1
AUR62007790 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.2e-26 125.6 257 61.9
Sed0016929 Sechium edule HOM05D001705 ORTHO05D002725 1.2e-26 125.6 258 76.7
Actinidia19236 Actinidia chinensis HOM05D001705 ORTHO05D002725 7.9e-26 122.9 115 78.3
Peaxi162Scf00083g01719 Petunia axillaris HOM05D001705 ORTHO05D002725 7.9e-26 122.9 258 75.2
FAN28G1436 Fragaria x ananassa HOM05D001705 ORTHO05D002725 1.4e-25 122.1 547 70.2
CsaV3_6G046840 Cucumis sativus L. HOM05D001705 ORTHO05D002725 8.8e-25 119.4 258 74.8
Solyc02g084600.4 Solanum lycopersicum HOM05D001705 ORTHO05D002725 8.8e-25 119.4 202 64.4
AUR62002982 Chenopodium quinoa HOM05D000312 ORTHO05D002725 1.1e-24 119.0 260 52.7
PSO675G6176 Papaver somniferum HOM05D001705 ORTHO05D002725 4.3e-24 117.1 256 73.8
RcHm_v2.0_Chr2g0100021 Rosa chinensis HOM05D001705 ORTHO05D002725 5.7e-24 116.7 547 69.5
TWI09G1571 Tripterygium wilfordii HOM05D001705 ORTHO05D002725 7.4e-24 116.3 258 55.8
Ah.02g124770 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.7e-23 115.2 256 53.5
SalBow8G3503 Salvia bowleyana HOM05D001705 ORTHO05D002725 2.8e-23 114.4 257 74.7
EL10As8g23862 Beta vulgaris HOM05D001705 ORTHO05D002725 4.8e-23 113.6 259 60.6
MELO3C007881.2 Cucumis melo HOM05D001705 ORTHO05D002725 4.8e-23 113.6 258 73.3
Sc07g0007330 Simmondsia chinensis HOM05D001705 ORTHO05D002725 1.8e-22 111.7 252 53.6
PSO384G2660 Papaver somniferum HOM05D003705 ORTHO05D002725 2.4e-22 111.3 259 55.6
AUR62007789 Chenopodium quinoa HOM05D000312 ORTHO05D002725 5.3e-22 110.2 250 59.6
FAN23G3072 Fragaria x ananassa HOM05D004495 ORTHO05D005361 5.3e-22 110.2 258 50.4
FAN26G1006 Fragaria x ananassa HOM05D001705 ORTHO05D002725 1.3e-20 105.5 258 49.2
Ah.13g066700 Amaranthus hybridus HOM05D003705 ORTHO05D002725 5.0e-20 103.6 257 69.3
ATR0661G193 Amborella trichopoda HOM05D001705 ORTHO05D002725 8.5e-20 102.8 256 71.9
Hund14023 Selenicereus undatus HOM05D001705 ORTHO05D002725 1.1e-19 102.4 256 68.8
SGA_v2.0_scaffold2G01238 Striga asiatica HOM05D001705 ORTHO05D002725 9.4e-19 99.4 258 62.8
HanXRQChr16g0530901 Helianthus annuus HOM05D001705 ORTHO05D002725 1.6e-18 98.6 259 57.9
PSO384G4644 Papaver somniferum HOM05D001705 ORTHO05D002725 2.1e-18 98.2 166 69.3
EL10Ac6g15676 Beta vulgaris HOM05D001705 ORTHO05D002725 6.1e-18 96.7 256 52.0
Lsat_1_v5_gn_3_75380 Lactuca sativa HOM05D001705 ORTHO05D002725 1.0e-17 95.9 259 54.1
AUR62027162 Chenopodium quinoa HOM05D001705 ORTHO05D002725 2.6e-16 91.3 141 77.3
AUR62007657 Chenopodium quinoa HOM05D004495 ORTHO05D005361 5.7e-16 90.1 256 59.8
ECA246G2311 Erigeron canadensis HOM05D000042 ORTHO05D000980 9.7e-16 89.4 256 56.2
SGA_v2.0_scaffold2G01235 Striga asiatica HOM05D002120 ORTHO05D002725 1.3e-15 89.0 158 68.4
AUR62003299 Chenopodium quinoa HOM05D002120 ORTHO05D002725 1.7e-15 88.6 166 68.7
PSO541G4589 Papaver somniferum HOM05D001705 ORTHO05D002725 4.8e-15 87.0 257 53.3
Ah.02g125140 Amaranthus hybridus HOM05D001705 ORTHO05D002725 4.1e-14 84.0 256 69.1
AUR62027163 Chenopodium quinoa HOM05D001705 ORTHO05D002725 4.1e-14 84.0 158 69.0
PSO384G1529 Papaver somniferum HOM05D000001 ORTHO05D002725 3.5e-13 80.9 258 45.7
PSO675G4346 Papaver somniferum HOM05D001705 ORTHO05D010003 7.7e-13 79.7 164 68.9
AUR62007788 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.3e-12 79.0 134 76.1
HanXRQChr16g0530911 Helianthus annuus HOM05D001705 ORTHO05D002725 2.9e-12 77.8 49 75.5
PSO384G2367 Papaver somniferum HOM05D001705 ORTHO05D002725 2.9e-12 77.8 156 73.1
Ah.02g127430 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.9e-11 75.1 93 75.3
PSO541G4650 Papaver somniferum HOM05D001705 ORTHO05D002725 5.5e-11 73.6 200 43.0
Ah.03g146170 Amaranthus hybridus HOM05D001705 ORTHO05D002725 7.2e-11 73.2 259 57.9
Atru.chr3.757 Acer truncatum HOM05D001705 ORTHO05D002725 1.6e-10 72.0 93 74.2
PSO541G3058 Papaver somniferum HOM05D001705 ORTHO05D002725 1.6e-10 72.0 49 73.5
DCAR_021489 Daucus carota HOM05D001705 ORTHO05D002725 3.6e-10 70.9 49 71.4
AUR62007644 Chenopodium quinoa HOM05D004495 ORTHO05D005361 4.7e-10 70.5 50 72.0
PSO675G9374 Papaver somniferum HOM05D001705 ORTHO05D002725 4.7e-10 70.5 48 75.0
PSO063G6131 Papaver somniferum HOM05D001705 ORTHO05D002725 8.0e-10 69.7 93 73.1
Ah.09g225520 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.4e-09 68.9 107 63.6
PSO675G6841 Papaver somniferum HOM05D001705 ORTHO05D002725 1.8e-09 68.6 50 68.0
AUR62027161 Chenopodium quinoa HOM05D003705 ORTHO05D002725 1.5e-08 65.5 144 56.2
AUR62044398 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.5e-08 65.5 144 56.2
Ah.03g141660 Amaranthus hybridus HOM05D003705 ORTHO05D002725 5.7e-08 63.5 126 76.2
SEGI_16014 Sequoiadendron giganteum HOM05D003705 ORTHO05D002217 8.2e-07 59.7 50 58.0
Dinv31151 Davidia involucrata HOM05D003705 ORTHO05D010003 3.1e-06 57.8 170 37.6
Migut.E00665 Erythranthe guttata HOM05D003705 ORTHO05D007730 9.1e-06 56.2 50 56.0


User provided reference genes

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