Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 1.3e-112 409.8 214 100.0
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 6.8e-58 228.0 215 60.9
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 5.7e-57 224.9 215 60.9
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 2.2e-56 223.0 215 59.5
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 4.1e-55 218.8 216 57.4
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.0e-54 216.5 214 59.3
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 3.5e-54 215.7 216 56.5
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 7.7e-54 214.5 216 60.2
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 1.7e-53 213.4 220 59.1
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 5.0e-53 211.8 214 56.1
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 3.2e-52 209.1 214 57.9
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 3.2e-52 209.1 215 56.3
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 3.6e-51 205.7 217 56.7
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 6.1e-51 204.9 217 57.6
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 4.0e-50 202.2 210 57.6
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 4.0e-50 202.2 215 56.3
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 5.2e-50 201.8 219 56.6
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 5.2e-50 201.8 216 54.2
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 8.8e-50 201.1 219 56.2
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 1.3e-48 197.2 222 57.7
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 3.7e-48 195.7 224 54.9
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 6.3e-48 194.9 217 56.7
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 8.3e-48 194.5 216 52.8
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.4e-47 193.7 211 55.5
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 5.4e-47 191.8 220 54.5
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 9.2e-47 191.0 216 56.9
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 2.0e-46 189.9 215 54.0
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 1.1e-44 184.1 219 56.6
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.5e-44 183.7 212 52.4
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.5e-44 183.7 222 55.4
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 2.5e-44 183.0 193 56.5
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 3.3e-44 182.6 216 53.7
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.8e-42 176.8 219 53.0
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 3.0e-42 176.0 220 56.4
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.2e-42 175.3 203 54.7
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 5.2e-42 175.3 220 52.7
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.0e-41 173.3 203 54.2
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.0e-41 173.3 203 54.2
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 2.6e-41 172.9 217 51.2
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 2.6e-41 172.9 222 50.9
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 3.4e-41 172.6 211 51.2
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 5.7e-41 171.8 222 53.6
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 7.5e-41 171.4 220 54.5
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 3.7e-40 169.1 224 50.4
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 4.9e-40 168.7 184 54.9
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 6.4e-40 168.3 218 51.4
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.3e-40 167.9 222 50.5
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 1.8e-39 166.8 219 51.1
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 4.1e-39 165.6 220 53.2
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 5.4e-39 165.2 222 50.0
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.2e-38 164.1 197 54.3
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 3.5e-38 162.5 220 50.9
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 7.8e-38 161.4 197 53.8
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 1.3e-37 160.6 218 50.9
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 1.3e-37 160.6 221 48.9
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 2.3e-37 159.8 204 52.0
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 2.3e-37 159.8 218 48.6
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 3.9e-37 159.1 216 48.6
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 6.6e-37 158.3 218 49.5
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.9e-36 156.8 212 49.5
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.6e-36 155.2 217 49.8
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 4.7e-35 152.1 207 50.2
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.0e-34 151.0 222 47.7
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.4e-34 150.6 198 50.0
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 4.0e-34 149.1 230 47.4
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 4.0e-34 149.1 222 46.8
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 4.0e-34 149.1 208 47.1
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 8.9e-34 147.9 229 47.6
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.2e-33 147.5 224 45.1
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 9.8e-33 144.4 224 47.3
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 9.8e-33 144.4 207 47.3
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 2.2e-32 143.3 217 45.2
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.9e-31 140.2 170 51.8
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 9.2e-31 137.9 227 45.4
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.7e-30 136.3 227 45.8
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 3.5e-30 136.0 223 43.5
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 4.6e-30 135.6 214 44.9
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 7.8e-30 134.8 202 48.0
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 1.1e-28 131.0 222 44.1
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 2.5e-28 129.8 209 43.5
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 4.3e-28 129.0 153 54.9
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 2.1e-27 126.7 226 46.9
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 4.7e-27 125.6 204 46.1
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 6.2e-27 125.2 230 40.0
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.1e-26 124.4 198 47.0
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 2.3e-26 123.2 249 41.8
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 6.8e-26 121.7 199 47.2
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 1.2e-25 120.9 226 43.8
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.0e-25 120.2 131 55.7
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 2.6e-25 119.8 190 46.8
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 3.4e-25 119.4 218 43.6
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 4.4e-25 119.0 211 40.3
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 5.8e-25 118.6 189 42.3
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 7.5e-25 118.2 216 44.9
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 1.7e-24 117.1 209 41.6
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 4.9e-24 115.5 228 40.4
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.9e-23 113.6 160 48.8
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 2.4e-23 113.2 211 44.1
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 2.4e-23 113.2 201 45.3
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 2.4e-23 113.2 194 46.4
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 4.1e-23 112.5 180 45.0
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 4.1e-23 112.5 180 45.0
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 9.2e-23 111.3 207 46.9
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 9.2e-23 111.3 200 45.0
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.6e-22 110.5 207 46.9
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 2.1e-22 110.2 200 44.5
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 4.6e-22 109.0 227 41.0
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 6.0e-22 108.6 183 41.5
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 7.8e-22 108.2 197 44.2
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 7.8e-22 108.2 197 44.2
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 3.9e-21 105.9 198 41.9
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 2.5e-20 103.2 222 42.3
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 3.6e-19 99.4 175 41.7
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 5.2e-18 95.5 172 39.5
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 3.4e-17 92.8 210 43.3
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 9.9e-17 91.3 177 42.9
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 9.9e-17 91.3 201 37.3
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 1.7e-16 90.5 92 57.6
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.7e-16 90.5 194 41.2
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 2.9e-16 89.7 179 38.0
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 9.2e-15 84.7 109 48.6
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 5.1e-13 79.0 113 46.0
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 6.6e-13 78.6 152 41.4
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 5.2e-10 68.9 183 35.5
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 5.2e-10 68.9 183 35.5
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 5.2e-10 68.9 183 35.5
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 5.2e-10 68.9 101 47.5
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 5.2e-10 68.9 101 47.5
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 2.0e-09 67.0 218 33.5
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.3e-08 64.3 189 30.7
Os07g0474300 Oryza sativa ssp. japonica HOM05D033341 ORTHO05D036979 1.3e-08 64.3 231 35.1
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 4.9e-08 62.4 87 51.7
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 4.9e-08 62.4 87 51.7
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 8.4e-08 61.6 87 51.7
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 8.4e-08 61.6 87 51.7
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 1.4e-07 60.8 161 36.6
Thecc.06G128900 Theobroma cacao HOM05D005571 ORTHO05D006919 1.9e-07 60.5 74 47.3
Thecc.04G308600 Theobroma cacao HOM05D005571 ORTHO05D006919 2.4e-07 60.1 74 48.6
Thecc.07G149400 Theobroma cacao HOM05D005571 ORTHO05D004433 7.8e-06 55.1 80 43.8


User provided reference genes

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