Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0578 Trochodendron aralioides HOM05D002678 ORTHO05D002920 1.3e-61 239.6 124 100.0
TAR628G0860 Trochodendron aralioides HOM05D002678 ORTHO05D002920 1.2e-51 206.5 124 87.9
TAR628G1455 Trochodendron aralioides HOM05D002678 ORTHO05D002920 6.3e-48 194.1 124 82.3
TAR628G0049 Trochodendron aralioides HOM05D002678 ORTHO05D002920 3.0e-42 175.3 93 96.8
TAR628G0078 Trochodendron aralioides HOM05D002678 ORTHO05D002920 9.7e-41 170.2 121 73.6
TAR628G1420 Trochodendron aralioides HOM05D002678 ORTHO05D002920 1.7e-40 169.5 120 75.8
TAR625G1454 Trochodendron aralioides HOM05D002678 ORTHO05D002920 3.6e-35 151.8 130 69.2
QL06p044552 Quercus lobata HOM05D002678 ORTHO05D002920 4.1e-23 111.7 135 53.3
Cfa004251 Carpinus fangiana HOM05D002678 ORTHO05D002920 8.5e-21 104.0 138 49.3
CiPaw.02G014300 Carya illinoinensis HOM05D002678 ORTHO05D002920 1.9e-20 102.8 142 45.1
ATR0733G097 Amborella trichopoda HOM05D002678 ORTHO05D002920 2.5e-20 102.4 121 42.1
Nn5g29477 Nelumbo nucifera HOM05D002678 ORTHO05D002920 2.5e-20 102.4 96 57.3
SEGI_03855 Sequoiadendron giganteum HOM05D002678 ORTHO05D002920 4.7e-19 98.2 136 43.4
Haze_15148 Corylus avellana HOM05D002678 ORTHO05D002920 6.1e-19 97.8 138 49.3
Dinv39937 Davidia involucrata HOM05D002678 ORTHO05D002920 1.0e-18 97.1 102 57.8
CiPaw.01G030800 Carya illinoinensis HOM05D002678 ORTHO05D002920 4.0e-18 95.1 129 47.3
MBI16_g10976_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 4.0e-18 95.1 109 45.0
Aqoxy5G01728 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 4.8e-16 88.2 102 46.1
SEGI_24546 Sequoiadendron giganteum HOM05D002678 ORTHO05D002920 1.3e-13 80.1 133 35.3
CiPaw.01G030700 Carya illinoinensis HOM05D002678 ORTHO05D002920 1.7e-13 79.7 134 41.8
Duzib170G1033 Durio zibethinus HOM05D002678 ORTHO05D002920 1.7e-13 79.7 124 37.1
ATR0759G110 Amborella trichopoda HOM05D002678 ORTHO05D002920 2.9e-13 79.0 130 36.9
MBI14_g21098_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 8.5e-13 77.4 136 36.0
TPR.G35579 Trifolium pratense HOM05D002678 ORTHO05D002920 8.5e-13 77.4 137 38.0
Cc07_g05260 Coffea canephora HOM05D002678 ORTHO05D002920 1.5e-12 76.6 130 40.0
TAR623G1692 Trochodendron aralioides HOM05D002678 ORTHO05D002920 2.5e-12 75.9 131 37.4
TAR636G3383 Trochodendron aralioides HOM05D002678 ORTHO05D002920 7.2e-12 74.3 134 35.1
Eucgr.H01927 Eucalyptus grandis HOM05D002678 ORTHO05D002920 9.4e-12 73.9 139 37.4
Medtr7g100340 Medicago truncatula HOM05D002678 ORTHO05D002920 1.6e-11 73.2 137 37.2
vmacro03134 Vaccinium macrocarpon HOM05D002678 ORTHO05D002920 1.6e-11 73.2 133 34.6
Hma1.2p1_0739F.1_g211150 Hydrangea macrophylla HOM05D052157 ORTHO05D002920 2.7e-11 72.4 145 35.2
Hma1.2p1_1528F.1_g289075 Hydrangea macrophylla HOM05D052157 ORTHO05D002920 2.7e-11 72.4 145 35.2
Ca_11435_v3 Cicer arietinum L. HOM05D002678 ORTHO05D002920 3.6e-11 72.0 96 44.8
Aqoxy2G01947 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 4.7e-11 71.6 114 39.5
Dinv06291 Davidia involucrata HOM05D002678 ORTHO05D002920 6.1e-11 71.2 81 46.9
Prupe.6G246400 Prunus persica HOM05D002678 ORTHO05D002920 6.1e-11 71.2 105 41.0
Rhsim05G0185100 Rhododendron simsii HOM05D002678 ORTHO05D002920 6.1e-11 71.2 85 44.7
Oeu035168.1 Olea europaea HOM05D002678 ORTHO05D002920 8.0e-11 70.9 81 43.2
ECA248G3075 Erigeron canadensis HOM05D002678 ORTHO05D002920 1.0e-10 70.5 86 41.9
Nn1g01330 Nelumbo nucifera HOM05D002678 ORTHO05D002920 1.0e-10 70.5 69 53.6
AUR62001571 Chenopodium quinoa HOM05D002678 ORTHO05D002920 1.4e-10 70.1 140 36.4
QL01p034494 Quercus lobata HOM05D002678 ORTHO05D002920 1.4e-10 70.1 97 41.2
RcHm_v2.0_Chr3g0467961 Rosa chinensis HOM05D002678 ORTHO05D002920 1.4e-10 70.1 94 42.6
Aqoxy4G03090 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 1.8e-10 69.7 104 40.4
Cpa.g.sc3922.1 Carica papaya HOM05D002678 ORTHO05D002920 1.8e-10 69.7 78 48.7
Gohir.A01G218900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.8e-10 69.7 109 41.3
Manes.08G073300 Manihot esculenta HOM05D002678 ORTHO05D002920 1.8e-10 69.7 113 38.1
Rhsim13G0088900 Rhododendron simsii HOM05D002678 ORTHO05D002920 1.8e-10 69.7 141 34.0
Gorai.002G253000 Gossypium raimondii HOM05D002678 ORTHO05D002920 3.0e-10 68.9 109 41.3
Phvul.001G172100 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 3.0e-10 68.9 113 42.5
Phvul.007G160800 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 4.0e-10 68.6 109 39.4
CiPaw.09G186200 Carya illinoinensis HOM05D002678 ORTHO05D002920 5.2e-10 68.2 97 40.2
MBI05_g32634_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 5.2e-10 68.2 82 42.7
Nn2g12832 Nelumbo nucifera HOM05D002678 ORTHO05D002920 5.2e-10 68.2 113 37.2
Psat6g069440 Pisum sativum HOM05D002678 ORTHO05D002920 5.2e-10 68.2 84 41.7
AUR62020213 Chenopodium quinoa HOM05D002678 ORTHO05D002920 6.8e-10 67.8 141 39.0
FvH4_6g14750 Fragaria vesca HOM05D002678 ORTHO05D002920 6.8e-10 67.8 85 40.0
FAN05G1053 Fragaria x ananassa HOM05D002678 ORTHO05D002920 6.8e-10 67.8 85 40.0
FAN09G4043 Fragaria x ananassa HOM05D002678 ORTHO05D002920 6.8e-10 67.8 85 40.0
FAN14G4174 Fragaria x ananassa HOM05D002678 ORTHO05D002920 6.8e-10 67.8 85 40.0
Gohir.D01G207900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 6.8e-10 67.8 109 41.3
HanXRQChr14g0429171 Helianthus annuus HOM05D002678 ORTHO05D002920 6.8e-10 67.8 123 32.5
TPR.G10526 Trifolium pratense HOM05D002678 ORTHO05D002920 6.8e-10 67.8 82 46.3
FAN02G3512 Fragaria x ananassa HOM05D002678 ORTHO05D002920 8.8e-10 67.4 85 40.0
Medtr1g067350 Medicago truncatula HOM05D002678 ORTHO05D002920 8.8e-10 67.4 103 37.9
Nn2g10547 Nelumbo nucifera HOM05D002678 ORTHO05D002920 8.8e-10 67.4 135 32.6
Actinidia37266 Actinidia chinensis HOM05D002678 ORTHO05D002920 1.2e-09 67.0 142 31.7
DCAR_017751 Daucus carota HOM05D002678 ORTHO05D002920 1.5e-09 66.6 129 33.3
Lsat_1_v5_gn_6_26380 Lactuca sativa HOM05D002678 ORTHO05D002920 1.5e-09 66.6 101 42.6
EL10Ac7g16278 Beta vulgaris HOM05D002678 ORTHO05D002920 2.0e-09 66.2 106 38.7
QL07p046064 Quercus lobata HOM05D002678 ORTHO05D002920 2.0e-09 66.2 115 35.7
COL.COLO4_07093 Corchorus olitorius HOM05D002678 ORTHO05D002920 2.6e-09 65.9 123 38.2
Gohir.D08G009900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 2.6e-09 65.9 127 33.1
CSS0019295 Camellia sinensis var. sinensis HOM05D002678 ORTHO05D002920 3.4e-09 65.5 71 46.5
Dinv35670 Davidia involucrata HOM05D002678 ORTHO05D002920 4.4e-09 65.1 139 31.7
Gorai.004G003100 Gossypium raimondii HOM05D002678 ORTHO05D002920 4.4e-09 65.1 127 34.6
Lj1C177T9 Lonicera japonica HOM05D002678 ORTHO05D002920 4.4e-09 65.1 85 41.2
MD04G1116500 Malus domestica HOM05D002678 ORTHO05D002920 7.5e-09 64.3 90 41.1
MD12G1132300 Malus domestica HOM05D002678 ORTHO05D002920 7.5e-09 64.3 90 41.1
TWI75G0718 Tripterygium wilfordii HOM05D002678 ORTHO05D002920 7.5e-09 64.3 144 34.0
VMungo0720G1849 Vigna mungo HOM05D002678 ORTHO05D002920 7.5e-09 64.3 106 38.7
Duzib150G0336 Durio zibethinus HOM05D002678 ORTHO05D002920 9.8e-09 63.9 134 31.3
Gohir.A08G000129 Gossypium hirsutum HOM05D002678 ORTHO05D002920 9.8e-09 63.9 127 33.9
Lalb_Chr02g0153371 Lupinus albus HOM05D002678 ORTHO05D002920 9.8e-09 63.9 106 35.8
CDE09G0663 Ceratophyllum demersum HOM05D002619 ORTHO05D002920 1.3e-08 63.5 97 37.1
Duzib106G2004 Durio zibethinus HOM05D002678 ORTHO05D002920 1.3e-08 63.5 107 39.3
Lsat_1_v5_gn_5_167180 Lactuca sativa HOM05D002678 ORTHO05D002920 1.3e-08 63.5 82 39.0
HPP92_012460 Vanilla planifolia HOM05D002678 ORTHO05D002920 1.3e-08 63.5 87 37.9
DCAR_018868 Daucus carota HOM05D002678 ORTHO05D002920 1.7e-08 63.2 153 30.1
HanXRQChr04g0110311 Helianthus annuus HOM05D002678 ORTHO05D002920 1.7e-08 63.2 106 34.0
SalBow3G2888 Salvia bowleyana HOM05D002678 ORTHO05D002920 1.7e-08 63.2 81 40.7
Cfa017459 Carpinus fangiana HOM05D002678 ORTHO05D002920 2.2e-08 62.8 78 42.3
Glyma.03G175100 Glycine max HOM05D002678 ORTHO05D002920 2.2e-08 62.8 72 44.4
Glyma.19G175800 Glycine max HOM05D002678 ORTHO05D002920 2.8e-08 62.4 101 39.6
Gohir.A04G078100 Gossypium hirsutum HOM05D002678 ORTHO05D002920 2.8e-08 62.4 95 43.2
Lj5g0022817 Lotus japonicus HOM05D002678 ORTHO05D002920 2.8e-08 62.4 85 43.5
Thecc.05G048400 Theobroma cacao HOM05D002678 ORTHO05D002920 2.8e-08 62.4 78 44.9
Cc01_g12070 Coffea canephora HOM05D002678 ORTHO05D002920 3.7e-08 62.0 87 34.5
HPP92_006589 Vanilla planifolia HOM05D002678 ORTHO05D002920 3.7e-08 62.0 82 39.0
VMungo1383G3255 Vigna mungo HOM05D002678 ORTHO05D002920 3.7e-08 62.0 77 42.9
Glyma.13G134700 Glycine max HOM05D002678 ORTHO05D002920 4.9e-08 61.6 109 36.7
Gorai.006G177000 Gossypium raimondii HOM05D002678 ORTHO05D002920 4.9e-08 61.6 123 36.6
Gohir.A09G160000 Gossypium hirsutum HOM05D002678 ORTHO05D002920 6.3e-08 61.2 123 36.6
Hma1.2p1_0746F.1_g212310 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 6.3e-08 61.2 123 30.9
Sc01g0003810 Simmondsia chinensis HOM05D002678 ORTHO05D002920 6.3e-08 61.2 106 35.8
Hma1.2p1_0035F.1_g021820 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 8.3e-08 60.8 82 40.2
Lj1g0018959 Lotus japonicus HOM05D002678 ORTHO05D002920 8.3e-08 60.8 133 32.3
CANSAT80G0424 Cannabis sativa HOM05D002678 ORTHO05D002920 1.1e-07 60.5 117 39.3
Gohir.D07G099200 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.1e-07 60.5 143 30.1
Gorai.001G106900 Gossypium raimondii HOM05D002678 ORTHO05D002920 1.1e-07 60.5 143 30.1
Sabra16G0089400 Salix brachista HOM05D002678 ORTHO05D002920 1.1e-07 60.5 132 34.1
SalBow3G1187 Salvia bowleyana HOM05D002678 ORTHO05D002920 1.1e-07 60.5 129 33.3
Solyc11g072890.1 Solanum lycopersicum HOM05D002678 ORTHO05D002920 1.1e-07 60.5 100 37.0
Thecc.09G330900 Theobroma cacao HOM05D002678 ORTHO05D002920 1.1e-07 60.5 136 30.9
Haze_20701 Corylus avellana HOM05D002678 ORTHO05D002920 1.4e-07 60.1 100 37.0
Rhsim08G0110600 Rhododendron simsii HOM05D002678 ORTHO05D002920 1.4e-07 60.1 109 45.0
Duzib168G1913 Durio zibethinus HOM05D002678 ORTHO05D002920 1.8e-07 59.7 75 37.3
Gohir.D09G155600 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.8e-07 59.7 123 35.8
Oeu040266.1 Olea europaea HOM05D002678 ORTHO05D002920 1.8e-07 59.7 79 41.8
PGR004G2176 Punica granatum HOM05D002678 ORTHO05D002920 1.8e-07 59.7 83 37.3
TWI79G0420 Tripterygium wilfordii HOM05D002678 ORTHO05D002920 1.8e-07 59.7 140 33.6
DCAR_015584 Daucus carota HOM05D002678 ORTHO05D002920 2.4e-07 59.3 142 30.3
Gohir.D04G117300 Gossypium hirsutum HOM05D002678 ORTHO05D002920 2.4e-07 59.3 95 42.1
Gorai.009G422300 Gossypium raimondii HOM05D002678 ORTHO05D002920 2.4e-07 59.3 92 42.4
Nitab4.5_0000182g0070 Nicotiana tabacum HOM05D002678 ORTHO05D002920 2.4e-07 59.3 87 37.9
Oeu058517.1 Olea europaea HOM05D002678 ORTHO05D002920 2.4e-07 59.3 80 38.8
Glyma.10G046800 Glycine max HOM05D002678 ORTHO05D002920 3.1e-07 58.9 106 38.7
Lj3g0016506 Lotus japonicus HOM05D002678 ORTHO05D002920 3.1e-07 58.9 69 43.5
Potri.006G215000 Populus trichocarpa HOM05D002678 ORTHO05D002920 3.1e-07 58.9 133 33.8
Potri.016G081600 Populus trichocarpa HOM05D002678 ORTHO05D002920 3.1e-07 58.9 132 33.3
CsaV3_6G022030 Cucumis sativus L. HOM05D002678 ORTHO05D002920 4.1e-07 58.5 144 29.2
Duzib093G0125 Durio zibethinus HOM05D002678 ORTHO05D002920 4.1e-07 58.5 78 43.6
Migut.N02647 Erythranthe guttata HOM05D002678 ORTHO05D002920 4.1e-07 58.5 148 30.4
Nitab4.5_0000270g0250 Nicotiana tabacum HOM05D002678 ORTHO05D002920 5.4e-07 58.2 86 38.4
Ciclev10030290m.g Citrus clementina HOM05D002678 ORTHO05D002920 7.0e-07 57.8 108 39.8
Gohir.D03G131000 Gossypium hirsutum HOM05D002678 ORTHO05D002920 7.0e-07 57.8 136 32.4
Peaxi162Scf00411g00813 Petunia axillaris HOM05D002678 ORTHO05D002920 7.0e-07 57.8 95 36.8
Sabra06G0166000 Salix brachista HOM05D002678 ORTHO05D002920 7.0e-07 57.8 134 33.6
COL.COLO4_18420 Corchorus olitorius HOM05D002678 ORTHO05D002920 9.2e-07 57.4 87 35.6
Gohir.A07G094900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.2e-06 57.0 82 37.8
PGSC0003DMG400015526 Solanum tuberosum HOM05D002678 ORTHO05D002920 1.2e-06 57.0 100 36.0
CiPaw.13G102100 Carya illinoinensis HOM05D002678 ORTHO05D002920 1.6e-06 56.6 90 38.9
Lalb_Chr25g0289391 Lupinus albus HOM05D002678 ORTHO05D002920 1.6e-06 56.6 129 34.1
Sed0001325 Sechium edule HOM05D002678 ORTHO05D002920 1.6e-06 56.6 136 31.6
MELO3C025706.2 Cucumis melo HOM05D002678 ORTHO05D002920 2.0e-06 56.2 80 38.8
Psat3g048080 Pisum sativum HOM05D002678 ORTHO05D002920 2.0e-06 56.2 121 35.5
arahy.Tifrunner.gnm1.ann1.2B715G Arachis hypogaea HOM05D002678 ORTHO05D002920 2.7e-06 55.8 108 31.5
arahy.Tifrunner.gnm1.ann1.FZ8WY7 Arachis hypogaea HOM05D002678 ORTHO05D002920 2.7e-06 55.8 108 31.5
PGR004G2814 Punica granatum HOM05D002678 ORTHO05D002920 2.7e-06 55.8 92 34.8
Sopen11g030550 Solanum pennellii HOM05D002678 ORTHO05D002920 2.7e-06 55.8 104 34.6
TWI53G1006 Tripterygium wilfordii HOM05D002678 ORTHO05D002920 2.7e-06 55.8 78 39.7
unitig_27.g25073 Utricularia gibba HOM05D002678 ORTHO05D002920 3.5e-06 55.5 114 35.1
Atru.chr8.2500 Acer truncatum HOM05D002678 ORTHO05D002920 4.5e-06 55.1 85 34.1
BraA10t45338Z Brassica rapa HOM05D002678 ORTHO05D002920 4.5e-06 55.1 69 43.5
Thhalv10002850m.g Eutrema salsugineum HOM05D002678 ORTHO05D002920 4.5e-06 55.1 77 41.6
Gohir.A03G037400 Gossypium hirsutum HOM05D002678 ORTHO05D002920 4.5e-06 55.1 141 32.6
BcaC06g32005 Brassica carinata HOM05D002678 ORTHO05D002920 5.9e-06 54.7 69 43.5
BcaNung03282 Brassica carinata HOM05D002678 ORTHO05D002920 5.9e-06 54.7 69 43.5
A10p33010 Brassica napus HOM05D002678 ORTHO05D002920 5.9e-06 54.7 69 43.5
C09p73980 Brassica napus HOM05D002678 ORTHO05D002920 5.9e-06 54.7 69 43.5
BolC9t60133H Brassica oleracea HOM05D002678 ORTHO05D002920 5.9e-06 54.7 69 43.5
ClCG02G020590 Citrullus lanatus HOM05D002678 ORTHO05D002920 5.9e-06 54.7 72 40.3
Duzib128G1720 Durio zibethinus HOM05D002678 ORTHO05D002920 5.9e-06 54.7 79 41.8
Thhalv10014890m.g Eutrema salsugineum HOM05D002678 ORTHO05D002920 5.9e-06 54.7 69 43.5
SGA_v2.0_scaffold94G28644 Striga asiatica HOM05D002678 ORTHO05D002920 5.9e-06 54.7 84 35.7
Ciclev10012982m.g Citrus clementina HOM05D002678 ORTHO05D002920 7.7e-06 54.3 70 41.4
Eucgr.A01213 Eucalyptus grandis HOM05D002678 ORTHO05D002920 7.7e-06 54.3 115 29.6
unitig_744.g24623 Utricularia gibba HOM05D002678 ORTHO05D002920 7.7e-06 54.3 69 43.5
Zm00001eb265860 Zea mays HOM05D002678 ORTHO05D002920 7.7e-06 54.3 120 30.8


User provided reference genes

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