Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 2.1e-77 292.4 157 100.0
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 1.8e-63 246.1 158 77.2
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 2.6e-59 232.3 156 73.7
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 4.5e-59 231.5 159 76.1
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 1.7e-58 229.6 165 73.3
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 3.8e-58 228.4 157 72.6
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 2.5e-57 225.7 149 75.8
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 4.2e-57 224.9 159 71.1
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 1.2e-56 223.4 157 73.2
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.6e-56 223.0 160 73.1
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.6e-56 223.0 160 73.1
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 1.6e-56 223.0 154 70.8
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.1e-56 222.6 160 73.1
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 7.9e-56 220.7 160 70.6
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 1.3e-55 219.9 160 72.5
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.8e-55 219.5 160 72.5
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 5.1e-55 218.0 159 72.3
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 4.3e-54 214.9 160 68.1
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 1.6e-53 213.0 153 70.6
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 1.6e-53 213.0 161 68.9
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 3.7e-53 211.8 157 68.8
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 1.4e-52 209.9 166 66.3
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 3.1e-52 208.8 162 72.2
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 4.1e-52 208.4 152 69.1
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 2.0e-51 206.1 156 70.5
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 3.4e-51 205.3 162 66.7
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 7.7e-51 204.1 159 68.6
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 7.7e-51 204.1 159 68.6
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 1.0e-50 203.8 163 71.2
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 1.3e-50 203.4 161 70.2
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 1.7e-50 203.0 162 65.4
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 2.2e-50 202.6 159 66.7
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 2.9e-50 202.2 157 65.6
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 5.0e-50 201.4 165 68.5
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 5.0e-50 201.4 157 68.2
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 8.5e-50 200.7 152 74.3
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 2.5e-49 199.1 170 63.5
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 2.5e-49 199.1 157 65.0
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 7.2e-49 197.6 162 69.8
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.2e-48 196.8 166 62.0
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 1.6e-48 196.4 162 64.2
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 2.1e-48 196.1 166 61.4
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 2.7e-48 195.7 164 64.6
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 2.7e-48 195.7 160 68.1
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 3.6e-48 195.3 168 66.7
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 4.6e-48 194.9 139 71.9
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 6.1e-48 194.5 151 70.2
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 1.4e-47 193.4 142 76.1
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.8e-47 193.0 153 68.6
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 3.0e-47 192.2 160 69.4
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 3.9e-47 191.8 161 67.1
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 3.9e-47 191.8 160 65.6
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 3.9e-47 191.8 155 66.5
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 5.1e-47 191.4 171 63.2
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 5.1e-47 191.4 170 70.0
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 8.8e-47 190.7 161 64.6
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.1e-46 190.3 162 67.9
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.1e-46 190.3 162 67.9
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.1e-46 190.3 164 65.2
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 1.1e-46 190.3 168 70.2
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 2.6e-46 189.1 159 65.4
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 3.3e-46 188.7 153 73.9
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 4.4e-46 188.3 168 63.1
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 9.7e-46 187.2 165 67.9
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 1.3e-45 186.8 170 62.4
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 1.7e-45 186.4 160 63.1
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 3.7e-45 185.3 94 91.5
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 4.8e-45 184.9 172 60.5
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 1.1e-44 183.7 181 60.8
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 3.1e-44 182.2 160 61.9
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 3.1e-44 182.2 134 70.9
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 5.3e-44 181.4 93 87.1
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 5.3e-44 181.4 151 70.2
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 1.2e-43 180.3 179 65.9
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 1.5e-43 179.9 93 88.2
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.5e-43 179.9 172 59.3
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 1.5e-43 179.9 151 59.6
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 2.0e-43 179.5 92 89.1
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 4.5e-43 178.3 162 67.3
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 1.0e-42 177.2 149 65.8
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 1.7e-42 176.4 174 58.6
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 2.2e-42 176.0 161 65.8
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 3.8e-42 175.3 149 63.8
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 4.7e-40 168.3 86 89.5
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 5.2e-39 164.9 88 84.1
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 1.1e-38 163.7 184 58.7
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 1.5e-38 163.3 83 90.4
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 4.4e-38 161.8 86 86.0
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 4.4e-38 161.8 81 91.4
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 5.7e-38 161.4 161 60.9
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 4.8e-37 158.3 158 55.7
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 4.8e-37 158.3 80 88.8
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 5.3e-36 154.8 82 86.6
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 1.6e-35 153.3 75 90.7
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 2.2e-34 149.4 87 75.9
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 8.5e-34 147.5 82 81.7
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 1.6e-32 143.3 90 73.3
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 4.0e-31 138.7 68 89.7
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 1.5e-30 136.7 134 61.2
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 2.0e-30 136.3 79 77.2
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 2.8e-29 132.5 88 70.5
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 9.1e-28 127.5 115 60.0
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 1.2e-24 117.1 116 65.5
Actinidia06621 Actinidia chinensis HOM05D007437 ORTHO05D009422 6.8e-07 58.2 86 46.5


User provided reference genes

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