Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0422 Trochodendron aralioides HOM05D008164 ORTHO05D010222 1.1e-89 333.2 158 100.0
CiPaw.05G001800 Carya illinoinensis HOM05D008164 ORTHO05D010222 2.4e-36 156.0 159 52.8
Haze_09987 Corylus avellana HOM05D008164 ORTHO05D010222 3.1e-36 155.6 162 53.7
Cfa004447 Carpinus fangiana HOM05D008164 ORTHO05D010222 7.7e-35 151.0 162 53.1
Dinv29630 Davidia involucrata HOM05D000112 ORTHO05D000564 7.7e-35 151.0 162 51.9
Duzib235G0793 Durio zibethinus HOM05D008164 ORTHO05D010222 6.8e-31 137.9 165 48.5
QL02p103286 Quercus lobata HOM05D008164 ORTHO05D010222 1.8e-28 129.8 176 46.0
TAR376G0048 Trochodendron aralioides HOM05D008164 ORTHO05D010222 1.6e-27 126.7 150 52.0
Ciclev10002734m.g Citrus clementina HOM05D008164 ORTHO05D010222 2.0e-27 126.3 171 45.0
Thecc.06G017700 Theobroma cacao HOM05D008164 ORTHO05D010222 2.0e-27 126.3 160 50.0
DCAR_003281 Daucus carota HOM05D008164 ORTHO05D010222 1.0e-26 124.0 151 43.7
PSO017G5192 Papaver somniferum HOM05D008164 ORTHO05D010222 3.3e-25 119.0 159 45.9
Potri.003G001200 Populus trichocarpa HOM05D008164 ORTHO05D010222 3.3e-25 119.0 160 45.6
Aqoxy7G02312 Aquilegia oxysepala HOM05D008164 ORTHO05D010222 1.2e-24 117.1 170 41.8
Manes.10G108200 Manihot esculenta HOM05D008164 ORTHO05D010222 6.2e-24 114.8 161 43.5
Gohir.A05G110000 Gossypium hirsutum HOM05D008164 ORTHO05D010222 2.3e-23 112.8 168 45.8
Prupe.1G585100 Prunus persica HOM05D008164 ORTHO05D010222 5.2e-23 111.7 185 45.9
ATR0580G429 Amborella trichopoda HOM05D008164 ORTHO05D010222 2.0e-22 109.8 153 45.1
Cc02_g23560 Coffea canephora HOM05D008164 ORTHO05D010222 9.8e-22 107.5 164 39.0
Gohir.D05G110300 Gossypium hirsutum HOM05D008164 ORTHO05D010222 5.4e-20 101.7 161 41.6
Gorai.009G114500 Gossypium raimondii HOM05D008164 ORTHO05D010222 5.4e-20 101.7 161 41.6
Rhsim11G0118100 Rhododendron simsii HOM05D008164 ORTHO05D010222 5.4e-20 101.7 165 39.4
PSO478G3084 Papaver somniferum HOM05D008164 ORTHO05D010222 2.7e-19 99.4 141 46.8
Lj5P282T61 Lonicera japonica HOM05D008164 ORTHO05D010222 3.5e-19 99.0 176 37.5
Atru.chr6.245 Acer truncatum HOM05D008164 ORTHO05D010222 1.0e-18 97.4 185 41.1
Sc23g0003940 Simmondsia chinensis HOM05D008164 ORTHO05D010222 2.3e-18 96.3 162 38.3
Solyc01g103070.2 Solanum lycopersicum HOM05D008164 ORTHO05D010222 8.6e-18 94.4 163 38.7
Sopen01g045480 Solanum pennellii HOM05D008164 ORTHO05D010222 8.6e-18 94.4 165 38.2
BcaNung01134 Brassica carinata HOM05D008164 ORTHO05D010222 1.1e-17 94.0 156 39.1
A01p15590 Brassica napus HOM05D008164 ORTHO05D010222 9.5e-17 90.9 159 39.6
BraA01t01499Z Brassica rapa HOM05D008164 ORTHO05D010222 9.5e-17 90.9 159 39.6
Glyma.12G164000 Glycine max HOM05D008164 ORTHO05D010222 9.5e-17 90.9 158 41.8
Oeu043611.1 Olea europaea HOM05D008164 ORTHO05D010222 2.1e-16 89.7 159 37.1
BcaC09g50889 Brassica carinata HOM05D008164 ORTHO05D010222 2.8e-16 89.4 159 39.0
C01p19540 Brassica napus HOM05D008164 ORTHO05D010222 2.8e-16 89.4 159 39.0
BolC1t01882H Brassica oleracea HOM05D008164 ORTHO05D010222 3.6e-16 89.0 157 38.2
Lsat_1_v5_gn_9_121861 Lactuca sativa HOM05D008164 ORTHO05D010222 4.7e-16 88.6 165 34.5
Peaxi162Scf00011g00188 Petunia axillaris HOM05D008164 ORTHO05D010222 6.2e-16 88.2 159 37.1
FAN04G0245 Fragaria x ananassa HOM05D008164 ORTHO05D010222 8.1e-16 87.8 182 38.5
PGSC0003DMG400038752 Solanum tuberosum HOM05D008164 ORTHO05D010222 1.1e-15 87.4 158 38.0
Sp7g22250 Schrenkiella parvula HOM05D008164 ORTHO05D010222 1.4e-15 87.0 152 36.8
FvH4_5g28060 Fragaria vesca HOM05D008164 ORTHO05D010222 4.0e-15 85.5 185 38.4
TWI14G0748 Tripterygium wilfordii HOM05D008164 ORTHO05D010222 4.0e-15 85.5 165 37.0
AL7G28990 Arabidopsis lyrata HOM05D008164 ORTHO05D010222 1.5e-14 83.6 153 34.6
Thhalv10026492m.g Eutrema salsugineum HOM05D008164 ORTHO05D010222 1.5e-14 83.6 157 34.4
FAN18G4000 Fragaria x ananassa HOM05D008164 ORTHO05D010222 1.5e-14 83.6 189 37.6
Cpa.g.sc173.30 Carica papaya HOM05D008164 ORTHO05D010222 2.6e-14 82.8 153 39.2
AT4G24265 Arabidopsis thaliana HOM05D008164 ORTHO05D010222 5.8e-14 81.6 150 32.7
Cpa.g.sc173.36 Carica papaya HOM05D008164 ORTHO05D010222 7.5e-14 81.3 154 39.6
Nitab4.5_0004668g0050 Nicotiana tabacum HOM05D008164 ORTHO05D010222 7.5e-14 81.3 147 38.1
CARHR231690 Cardamine hirsuta HOM05D008164 ORTHO05D010222 2.9e-13 79.3 147 36.1
Cpa.g.sc173.26 Carica papaya HOM05D008164 ORTHO05D010222 2.9e-13 79.3 153 39.2
BcaC09g50645 Brassica carinata HOM05D008164 ORTHO05D010222 3.7e-13 79.0 155 39.4
C01p22560 Brassica napus HOM05D008164 ORTHO05D010222 3.7e-13 79.0 155 39.4
BolC1t02189H Brassica oleracea HOM05D008164 ORTHO05D010222 3.7e-13 79.0 155 39.4
Migut.N00863 Erythranthe guttata HOM05D008164 ORTHO05D010222 1.9e-12 76.6 163 33.1
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 2.4e-12 76.3 149 38.9
PGR142G0304 Punica granatum HOM05D008164 ORTHO05D010222 1.0e-10 70.9 129 35.7
Carub.0007s1679 Capsella rubella HOM05D008164 ORTHO05D010222 5.1e-10 68.6 180 31.1
Nitab4.5_0008306g0040 Nicotiana tabacum HOM05D008164 ORTHO05D010222 5.1e-10 68.6 147 36.7
Manes.07G030300 Manihot esculenta HOM05D008164 ORTHO05D010222 8.6e-10 67.8 155 32.9
Phvul.006G221400 Phaseolus vulgaris HOM05D045043 ORTHO05D010222 7.3e-09 64.7 159 34.6
Cpa.g.c34058.1 Carica papaya HOM05D008164 ORTHO05D010222 6.2e-08 61.6 134 36.6
Cpa.g.sc173.33 Carica papaya HOM05D008164 ORTHO05D010222 6.2e-08 61.6 134 36.6
Cpa.g.sc173.39 Carica papaya HOM05D008164 ORTHO05D010222 2.3e-07 59.7 133 36.1
RcHm_v2.0_Chr7g0220231 Rosa chinensis HOM05D008164 ORTHO05D010222 6.8e-07 58.2 94 44.7
FAN08G3488 Fragaria x ananassa HOM05D008164 ORTHO05D010222 8.9e-07 57.8 94 44.7
Eucgr.I02795 Eucalyptus grandis HOM05D008164 ORTHO05D010222 2.6e-06 56.2 190 27.9
arahy.Tifrunner.gnm1.ann1.S0ITFJ Arachis hypogaea HOM05D037561 ORTHO05D010222 5.8e-06 55.1 187 27.8
MELO3C022933.2 Cucumis melo HOM05D051489 ORTHO05D044912 9.9e-06 54.3 163 32.5


User provided reference genes

Program Settings