Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0378 Trochodendron aralioides HOM05D001459 ORTHO05D001359 7.1e-97 357.5 205 100.0
GSVIVG01009665001 Vitis vinifera HOM05D001459 ORTHO05D001359 2.5e-25 119.8 118 53.4
GSVIVG01019009001 Vitis vinifera HOM05D001459 ORTHO05D001359 3.6e-24 115.9 133 51.9
MD15G1266700 Malus domestica HOM05D001459 ORTHO05D001359 1.8e-23 113.6 126 50.0
Prupe.7G150700 Prunus persica HOM05D001459 ORTHO05D001359 3.0e-23 112.8 121 48.8
ClCG01G019360 Citrullus lanatus HOM05D001459 ORTHO05D001359 1.5e-22 110.5 112 55.4
Hma1.2p1_3707F.1_g337320 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 5.7e-22 108.6 126 53.2
Potri.005G126000 Populus trichocarpa HOM05D001459 ORTHO05D001359 5.7e-22 108.6 126 50.8
TAR381G1105 Trochodendron aralioides HOM05D001459 ORTHO05D001359 5.7e-22 108.6 104 58.7
CiPaw.02G015400 Carya illinoinensis HOM05D001459 ORTHO05D001359 7.5e-22 108.2 143 46.9
Sed0015500 Sechium edule HOM05D001459 ORTHO05D001359 9.8e-22 107.8 139 55.4
Dinv39958 Davidia involucrata HOM05D001459 ORTHO05D001359 1.3e-21 107.5 110 53.6
Manes.13G136900 Manihot esculenta HOM05D001459 ORTHO05D001359 1.3e-21 107.5 106 53.8
Hma1.2p1_0652F.1_g195860 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 2.2e-21 106.7 126 53.2
Ciclev10025963m.g Citrus clementina HOM05D001459 ORTHO05D001359 3.7e-21 105.9 126 50.8
CsaV3_6G046080 Cucumis sativus L. HOM05D001459 ORTHO05D001359 8.3e-21 104.8 118 50.8
VMungo0251G2841 Vigna mungo HOM05D001459 ORTHO05D001359 8.3e-21 104.8 129 46.5
QL06p045359 Quercus lobata HOM05D001459 ORTHO05D001359 1.4e-20 104.0 110 54.5
MSTRG.2753 Avicennia marina HOM05D001459 ORTHO05D001359 2.4e-20 103.2 130 46.9
Cfa004278 Carpinus fangiana HOM05D000088 ORTHO05D001217 2.4e-20 103.2 110 52.7
Duzib147G1182 Durio zibethinus HOM05D001459 ORTHO05D001359 2.4e-20 103.2 108 50.9
FAN23G1882 Fragaria x ananassa HOM05D001459 ORTHO05D001359 4.1e-20 102.4 132 46.2
FAN26G2630 Fragaria x ananassa HOM05D001459 ORTHO05D001359 4.1e-20 102.4 132 46.2
FvH4_1g13880 Fragaria vesca HOM05D001459 ORTHO05D001359 5.4e-20 102.1 132 46.2
FAN19G1027 Fragaria x ananassa HOM05D001459 ORTHO05D001359 5.4e-20 102.1 132 46.2
Haze_15122 Corylus avellana HOM05D001459 ORTHO05D001359 7.0e-20 101.7 110 52.7
MSTRG.15280 Avicennia marina HOM05D001459 ORTHO05D001359 9.1e-20 101.3 128 48.4
RcHm_v2.0_Chr2g0102191 Rosa chinensis HOM05D001459 ORTHO05D001359 1.2e-19 100.9 136 45.6
Cpa.g.sc158.7 Carica papaya HOM05D001459 ORTHO05D001359 1.6e-19 100.5 126 50.0
Cc07_g09170 Coffea canephora HOM05D001459 ORTHO05D001359 2.0e-19 100.1 119 51.3
FAN28G1442 Fragaria x ananassa HOM05D001459 ORTHO05D001359 2.0e-19 100.1 134 45.5
Sabra07G0025300 Salix brachista HOM05D001459 ORTHO05D001359 2.0e-19 100.1 101 51.5
Glyma.02G058800 Glycine max HOM05D001459 ORTHO05D001359 2.7e-19 99.8 127 48.8
MELO3C007811.2 Cucumis melo HOM05D001459 ORTHO05D001359 3.5e-19 99.4 112 52.7
Eucgr.H01256 Eucalyptus grandis HOM05D001459 ORTHO05D001359 5.9e-19 98.6 124 48.4
Lj4C197T2 Lonicera japonica HOM05D001459 ORTHO05D001359 5.9e-19 98.6 132 47.7
TAR625G0297 Trochodendron aralioides HOM05D001459 ORTHO05D001359 7.7e-19 98.2 89 57.3
Actinidia12110 Actinidia chinensis HOM05D001459 ORTHO05D001359 1.0e-18 97.8 119 48.7
COL.COLO4_22118 Corchorus olitorius HOM05D001459 ORTHO05D001359 1.0e-18 97.8 123 48.0
Hma1.2p1_1228F.1_g268620 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 1.3e-18 97.4 99 54.5
Phvul.003G252000 Phaseolus vulgaris HOM05D001459 ORTHO05D001359 1.3e-18 97.4 125 45.6
Glyma.16G141500 Glycine max HOM05D001459 ORTHO05D001359 1.7e-18 97.1 124 45.2
Lj4g0000001 Lotus japonicus HOM05D001459 ORTHO05D001359 1.7e-18 97.1 117 47.0
Potri.007G029400 Populus trichocarpa HOM05D001459 ORTHO05D001359 1.7e-18 97.1 104 50.0
Hma1.2p1_0203F.1_g086580 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 2.3e-18 96.7 127 44.9
Actinidia36544 Actinidia chinensis HOM05D001459 ORTHO05D001359 2.9e-18 96.3 119 50.4
Nn1g05081 Nelumbo nucifera HOM05D001459 ORTHO05D001359 2.9e-18 96.3 99 53.5
Migut.H00187 Erythranthe guttata HOM05D001459 ORTHO05D001359 3.8e-18 95.9 130 48.5
SGA_v2.0_scaffold33G13393 Striga asiatica HOM05D001459 ORTHO05D001359 5.0e-18 95.5 130 44.6
CiPaw.01G034500 Carya illinoinensis HOM05D001459 ORTHO05D001359 8.6e-18 94.7 104 51.0
Lalb_Chr05g0227641 Lupinus albus HOM05D001459 ORTHO05D001359 8.6e-18 94.7 115 46.1
ECA232G3366 Erigeron canadensis HOM05D001459 ORTHO05D001359 2.5e-17 93.2 143 43.4
Peaxi162Scf00008g00417 Petunia axillaris HOM05D001459 ORTHO05D001359 2.5e-17 93.2 111 46.8
TWI73G0633 Tripterygium wilfordii HOM05D001459 ORTHO05D001359 2.5e-17 93.2 107 45.8
CANSAT01G1094 Cannabis sativa HOM05D001459 ORTHO05D001359 3.2e-17 92.8 110 49.1
PGSC0003DMG400012660 Solanum tuberosum HOM05D001459 ORTHO05D001359 3.2e-17 92.8 128 48.4
Medtr8g077950 Medicago truncatula HOM05D001459 ORTHO05D001359 5.5e-17 92.0 117 44.4
PSO700G0112 Papaver somniferum HOM05D001459 ORTHO05D001359 7.2e-17 91.7 125 56.8
DCAR_025934 Daucus carota HOM05D001459 ORTHO05D001359 9.5e-17 91.3 121 47.1
Sopen02g030280 Solanum pennellii HOM05D001459 ORTHO05D001359 9.5e-17 91.3 128 47.7
HanXRQChr03g0069071 Helianthus annuus HOM05D001459 ORTHO05D001359 1.2e-16 90.9 114 47.4
Atru.chr3.533 Acer truncatum HOM05D001459 ORTHO05D001359 1.6e-16 90.5 125 44.8
Ca_26385_v3 Cicer arietinum L. HOM05D001459 ORTHO05D001359 1.6e-16 90.5 121 42.1
ATR0733G172 Amborella trichopoda HOM05D001459 ORTHO05D001359 2.1e-16 90.1 127 48.8
CAN.G53.41 Capsicum annuum HOM05D001459 ORTHO05D001359 2.1e-16 90.1 111 46.8
ECA246G3405 Erigeron canadensis HOM05D001788 ORTHO05D006995 2.1e-16 90.1 134 41.0
PSO170G2342 Papaver somniferum HOM05D001459 ORTHO05D001359 2.1e-16 90.1 125 59.2
Hund16578 Selenicereus undatus HOM05D001459 ORTHO05D001359 2.8e-16 89.7 133 45.1
Psat4g091720 Pisum sativum HOM05D001459 ORTHO05D001359 4.7e-16 89.0 109 45.9
arahy.Tifrunner.gnm1.ann1.AVA03Z Arachis hypogaea HOM05D001459 ORTHO05D001359 8.0e-16 88.2 138 43.5
Solyc02g062950.3 Solanum lycopersicum HOM05D001459 ORTHO05D001359 1.0e-15 87.8 125 44.0
Sopen02g013990 Solanum pennellii HOM05D001459 ORTHO05D001359 1.0e-15 87.8 125 44.0
TWI09G0088 Tripterygium wilfordii HOM05D001459 ORTHO05D001359 1.0e-15 87.8 117 42.7
Duzib264G0166 Durio zibethinus HOM05D001459 ORTHO05D001359 2.3e-15 86.7 113 46.9
Rhsim08G0112800 Rhododendron simsii HOM05D001788 ORTHO05D006995 2.3e-15 86.7 128 40.6
arahy.Tifrunner.gnm1.ann1.J541GW Arachis hypogaea HOM05D001459 ORTHO05D001359 4.0e-15 85.9 123 44.7
Glyma.01G177400 Glycine max HOM05D001459 ORTHO05D001359 4.0e-15 85.9 122 45.9
Sed0024040 Sechium edule HOM05D001459 ORTHO05D001359 4.0e-15 85.9 130 47.7
EL10Ac6g14910 Beta vulgaris HOM05D001459 ORTHO05D001359 5.2e-15 85.5 117 45.3
Thecc.01G039900 Theobroma cacao HOM05D001459 ORTHO05D001359 5.2e-15 85.5 98 45.9
Lalb_Chr09g0333611 Lupinus albus HOM05D001459 ORTHO05D001359 6.8e-15 85.1 135 46.7
Nn5g29526 Nelumbo nucifera HOM05D001459 ORTHO05D001359 6.8e-15 85.1 96 53.1
Cfa004158 Carpinus fangiana HOM05D001459 ORTHO05D001359 8.8e-15 84.7 130 43.1
TPR.G20292 Trifolium pratense HOM05D001459 ORTHO05D001359 8.8e-15 84.7 127 37.8
Nitab4.5_0003410g0090 Nicotiana tabacum HOM05D001459 ORTHO05D001359 1.2e-14 84.3 108 43.5
Gohir.A11G186100 Gossypium hirsutum HOM05D001459 ORTHO05D001359 2.0e-14 83.6 94 45.7
Lsat_1_v5_gn_3_78600 Lactuca sativa HOM05D001459 ORTHO05D001359 2.6e-14 83.2 113 49.6
Gorai.008G068900 Gossypium raimondii HOM05D001459 ORTHO05D001359 4.4e-14 82.4 126 45.2
CSS0014466 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 5.7e-14 82.0 108 48.1
Gorai.007G205700 Gossypium raimondii HOM05D001459 ORTHO05D001359 5.7e-14 82.0 94 44.7
Nitab4.5_0001279g0170 Nicotiana tabacum HOM05D001459 ORTHO05D001359 9.8e-14 81.3 120 45.8
Peaxi162Scf00427g00516 Petunia axillaris HOM05D001459 ORTHO05D001359 9.8e-14 81.3 128 46.1
AUR62003183 Chenopodium quinoa HOM05D001459 ORTHO05D001359 1.3e-13 80.9 117 44.4
Gohir.A12G065466 Gossypium hirsutum HOM05D001459 ORTHO05D001359 1.7e-13 80.5 124 45.2
Gohir.D11G192700 Gossypium hirsutum HOM05D001459 ORTHO05D001359 1.7e-13 80.5 94 44.7
Nn5g29527 Nelumbo nucifera HOM05D001459 ORTHO05D001359 1.7e-13 80.5 120 45.8
Lj2g0001412 Lotus japonicus HOM05D001459 ORTHO05D001359 2.2e-13 80.1 129 42.6
AUR62008004 Chenopodium quinoa HOM05D001459 ORTHO05D001359 4.9e-13 79.0 117 43.6
CAN.G358.125 Capsicum annuum HOM05D001459 ORTHO05D001359 6.3e-13 78.6 126 44.4
Oeu037894.1 Olea europaea HOM05D001459 ORTHO05D001359 6.3e-13 78.6 94 46.8
Migut.L00297 Erythranthe guttata HOM05D001459 ORTHO05D001359 8.3e-13 78.2 121 43.8
CSS0014012 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 1.1e-12 77.8 113 45.1
HanXRQChr11g0338871 Helianthus annuus HOM05D001459 ORTHO05D001359 1.4e-12 77.4 109 44.0
Aqoxy5G01683 Aquilegia oxysepala HOM05D001459 ORTHO05D001359 1.8e-12 77.0 128 49.2
Gohir.D12G065600 Gossypium hirsutum HOM05D001459 ORTHO05D001359 3.1e-12 76.3 124 42.7
Nitab4.5_0002128g0040 Nicotiana tabacum HOM05D001459 ORTHO05D001359 3.1e-12 76.3 120 45.0
Cfa019338 Carpinus fangiana HOM05D001459 ORTHO05D001359 7.0e-12 75.1 122 41.0
Duzib187G0107 Durio zibethinus HOM05D001459 ORTHO05D001359 7.0e-12 75.1 101 44.6
SEGI_12461 Sequoiadendron giganteum HOM05D001459 ORTHO05D001359 9.2e-12 74.7 134 44.0
Glyma.11G065000 Glycine max HOM05D001459 ORTHO05D001359 1.6e-11 73.9 115 40.9
Sc03g0000900 Simmondsia chinensis HOM05D001459 ORTHO05D001359 2.7e-11 73.2 112 49.1
THA.LOC104819800 Tarenaya hassleriana HOM05D001459 ORTHO05D001359 4.5e-11 72.4 119 39.5
THA.LOC104807546 Tarenaya hassleriana HOM05D001459 ORTHO05D001359 1.0e-10 71.2 126 40.5
Ah.03g139290 Amaranthus hybridus HOM05D001459 ORTHO05D001359 2.9e-10 69.7 114 43.0
Carub.0007s0359 Capsella rubella HOM05D001459 ORTHO05D001359 6.6e-10 68.6 119 38.7
A08p22380 Brassica napus HOM05D001459 ORTHO05D001359 1.5e-09 67.4 136 35.3
BraA08t34195Z Brassica rapa HOM05D001459 ORTHO05D001359 1.5e-09 67.4 136 35.3
AL7G14280 Arabidopsis lyrata HOM05D001459 ORTHO05D001359 1.9e-09 67.0 115 39.1
BolC3t20245H Brassica oleracea HOM05D001459 ORTHO05D001359 2.5e-09 66.6 136 35.3
Dinv26807 Davidia involucrata HOM05D000088 ORTHO05D001217 3.3e-09 66.2 119 42.9
BcaC01g00445 Brassica carinata HOM05D001459 ORTHO05D001359 4.3e-09 65.9 135 36.3
C03p79920 Brassica napus HOM05D001459 ORTHO05D001359 4.3e-09 65.9 135 36.3
HanXRQChr11g0324881 Helianthus annuus HOM05D001459 ORTHO05D001359 5.6e-09 65.5 121 37.2
AT4G36730 Arabidopsis thaliana HOM05D001459 ORTHO05D001359 7.3e-09 65.1 137 37.2
BcaB03g12373 Brassica carinata HOM05D001459 ORTHO05D001359 7.3e-09 65.1 136 35.3
BcaNung00705 Brassica carinata HOM05D001459 ORTHO05D001359 7.3e-09 65.1 145 31.0
C01p02370 Brassica napus HOM05D001459 ORTHO05D001359 7.3e-09 65.1 145 31.0
CARHR245080 Cardamine hirsuta HOM05D001459 ORTHO05D001359 1.2e-08 64.3 139 38.1
Cfa010064 Carpinus fangiana HOM05D001459 ORTHO05D001359 1.2e-08 64.3 108 39.8
BolC1t00228H Brassica oleracea HOM05D001459 ORTHO05D001359 1.6e-08 63.9 145 30.3
HPP92_012822 Vanilla planifolia HOM05D001459 ORTHO05D001359 2.1e-08 63.5 147 32.7
ECA238G4073 Erigeron canadensis HOM05D001459 ORTHO05D001359 2.8e-08 63.2 143 38.5
Nn1g01860 Nelumbo nucifera HOM05D001459 ORTHO05D001359 2.8e-08 63.2 120 38.3
BraA01t00207Z Brassica rapa HOM05D001459 ORTHO05D001359 3.6e-08 62.8 146 31.5
MELO3C032216.2 Cucumis melo HOM05D001459 ORTHO05D001359 6.1e-08 62.0 49 57.1
PSO063G5354 Papaver somniferum HOM05D001459 ORTHO05D001359 8.0e-08 61.6 108 36.1
Potri.002G167100 Populus trichocarpa HOM05D002964 ORTHO05D003498 8.0e-08 61.6 111 34.2
A01p02180 Brassica napus HOM05D001459 ORTHO05D001359 1.0e-07 61.2 146 30.8
Sp7g34390 Schrenkiella parvula HOM05D001459 ORTHO05D001359 1.0e-07 61.2 140 34.3
Thhalv10025733m.g Eutrema salsugineum HOM05D001459 ORTHO05D001359 2.3e-07 60.1 138 33.3
Lsat_1_v5_gn_4_153461 Lactuca sativa HOM05D001459 ORTHO05D001359 2.3e-07 60.1 125 48.8
PSO782G4644 Papaver somniferum HOM05D001459 ORTHO05D001359 2.3e-07 60.1 125 46.4
unitig_88.g27807 Utricularia gibba HOM05D001459 ORTHO05D001359 3.0e-07 59.7 126 44.4
CiPaw.01G071000 Carya illinoinensis HOM05D002964 ORTHO05D003498 4.0e-07 59.3 44 52.3
MBI19_g41117_MAGBIO Magnolia biondii HOM05D001459 ORTHO05D001359 4.0e-07 59.3 119 37.0
CSS0021144 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 5.2e-07 58.9 107 37.4
CDE06G2237 Ceratophyllum demersum HOM05D001459 ORTHO05D001359 5.2e-07 58.9 131 33.6
QL04p059655 Quercus lobata HOM05D002964 ORTHO05D003498 5.2e-07 58.9 44 50.0
SEGI_34798 Sequoiadendron giganteum HOM05D001459 ORTHO05D001359 6.8e-07 58.5 142 34.5
Nn3g19377 Nelumbo nucifera HOM05D001459 ORTHO05D001359 8.9e-07 58.2 120 35.8
Haze_15611 Corylus avellana HOM05D002964 ORTHO05D003498 1.2e-06 57.8 44 50.0
Lalb_Chr04g0261701 Lupinus albus HOM05D002964 ORTHO05D003498 1.5e-06 57.4 44 50.0
CANSAT80G0627 Cannabis sativa HOM05D002964 ORTHO05D003498 2.0e-06 57.0 46 47.8
Cfa003839 Carpinus fangiana HOM05D002964 ORTHO05D003498 2.0e-06 57.0 44 52.3
Manes.01G249900 Manihot esculenta HOM05D002964 ORTHO05D003498 2.0e-06 57.0 44 47.7
Solyc02g085610.4 Solanum lycopersicum HOM05D001459 ORTHO05D001359 2.0e-06 57.0 87 44.8
ATR0197G024 Amborella trichopoda HOM05D002964 ORTHO05D003498 2.6e-06 56.6 125 36.8
HanXRQChr17g0563711 Helianthus annuus HOM05D001459 ORTHO05D001359 2.6e-06 56.6 105 36.2
VMungo0540G1601 Vigna mungo HOM05D002964 ORTHO05D003498 2.6e-06 56.6 44 50.0
CDE07G1225 Ceratophyllum demersum HOM05D001459 ORTHO05D001359 3.4e-06 56.2 125 33.6
ECA240G2874 Erigeron canadensis HOM05D001459 ORTHO05D001359 3.4e-06 56.2 115 34.8
Lj7C504T14 Lonicera japonica HOM05D002964 ORTHO05D003498 3.4e-06 56.2 124 32.3
Aa31LG9G15510 Aethionema arabicum HOM05D001459 ORTHO05D001359 4.4e-06 55.8 115 34.8
Dinv42088 Davidia involucrata HOM05D001459 ORTHO05D045162 4.4e-06 55.8 144 31.2
Ah.12g055550 Amaranthus hybridus HOM05D001459 ORTHO05D001359 5.7e-06 55.5 114 32.5
EL10Ac5g12000 Beta vulgaris HOM05D001459 ORTHO05D001359 5.7e-06 55.5 110 33.6
MBI19_g32495_MAGBIO Magnolia biondii HOM05D001459 ORTHO05D001359 5.7e-06 55.5 98 38.8
QL02p015160 Quercus lobata HOM05D002964 ORTHO05D003498 5.7e-06 55.5 44 47.7
HanXRQChr03g0081571 Helianthus annuus HOM05D001459 ORTHO05D001359 7.5e-06 55.1 115 33.9
Atru.chr5.612 Acer truncatum HOM05D002964 ORTHO05D003498 9.8e-06 54.7 103 34.0
Aqoxy3G02160 Aquilegia oxysepala HOM05D001459 ORTHO05D001359 9.8e-06 54.7 140 30.7
Cc08_g03540 Coffea canephora HOM05D001459 ORTHO05D001359 9.8e-06 54.7 115 33.9
Duzib138G1760 Durio zibethinus HOM05D002964 ORTHO05D003498 9.8e-06 54.7 92 35.9
QL11p042781 Quercus lobata HOM05D013780 ORTHO05D011525 9.8e-06 54.7 131 36.6


User provided reference genes

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