Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0373 Trochodendron aralioides HOM05D006471 ORTHO05D008157 9.2e-220 766.5 373 100.0
Nn2g12513 Nelumbo nucifera HOM05D006471 ORTHO05D008157 4.2e-140 501.9 373 67.6
CSS0032634 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 8.8e-130 467.6 383 64.8
CSS0035224 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 1.5e-129 466.8 383 64.5
PSO782G0560 Papaver somniferum HOM05D006471 ORTHO05D008157 2.8e-128 462.6 381 62.7
Hma1.2p1_0044F.1_g026290 Hydrangea macrophylla HOM05D006471 ORTHO05D008157 4.8e-128 461.8 388 63.1
Potri.007G075500 Populus trichocarpa HOM05D006471 ORTHO05D008157 9.1e-127 457.6 384 63.8
CiPaw.05G172000 Carya illinoinensis HOM05D006471 ORTHO05D008157 2.7e-126 456.1 374 63.1
Haze_11788 Corylus avellana HOM05D006471 ORTHO05D008157 1.5e-124 450.3 374 62.6
Actinidia04343 Actinidia chinensis HOM05D006471 ORTHO05D008157 2.5e-124 449.5 313 70.9
PSO170G1614 Papaver somniferum HOM05D006471 ORTHO05D008157 2.5e-124 449.5 379 62.0
MBI06_g44273_MAGBIO Magnolia biondii HOM05D006471 ORTHO05D008157 3.2e-124 449.1 373 62.7
Cfa008776 Carpinus fangiana HOM05D006471 ORTHO05D008157 2.8e-123 446.0 374 62.3
Thecc.02G154800 Theobroma cacao HOM05D006471 ORTHO05D008157 4.7e-123 445.3 373 63.8
Dinv17647 Davidia involucrata HOM05D000200 ORTHO05D001546 2.6e-121 439.5 333 67.3
Atru.chr11.1240 Acer truncatum HOM05D006471 ORTHO05D008157 5.7e-121 438.3 372 61.0
Manes.04G162800 Manihot esculenta HOM05D006471 ORTHO05D008157 7.5e-121 438.0 372 61.8
Ciclev10031833m.g Citrus clementina HOM05D006471 ORTHO05D008157 1.3e-120 437.2 379 61.5
TWI74G1585 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 1.3e-120 437.2 382 62.8
TWI77G0721 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 4.9e-120 435.3 306 72.2
Sabra07G0063800 Salix brachista HOM05D006471 ORTHO05D008157 8.3e-120 434.5 295 73.2
COL.COLO4_33107 Corchorus olitorius HOM05D006471 ORTHO05D008157 1.6e-118 430.3 329 66.9
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 4.5e-118 428.7 353 62.3
Cpa.g.sc60.91 Carica papaya HOM05D006471 ORTHO05D008157 5.9e-118 428.3 379 61.7
Nn8g40194 Nelumbo nucifera HOM05D006471 ORTHO05D008157 3.8e-117 425.6 272 75.4
RcHm_v2.0_Chr4g0446941 Rosa chinensis HOM05D006471 ORTHO05D008157 9.5e-116 421.0 375 59.5
Duzib132G0448 Durio zibethinus HOM05D006471 ORTHO05D008157 1.2e-115 420.6 376 60.6
Psat6g234000 Pisum sativum HOM05D006471 ORTHO05D008157 1.2e-115 420.6 381 59.3
Sopen04g004170 Solanum pennellii HOM05D006471 ORTHO05D008157 1.2e-115 420.6 373 59.8
CANSAT78G1799 Cannabis sativa HOM05D006471 ORTHO05D008157 1.6e-115 420.2 369 60.4
Solyc04g008990.3 Solanum lycopersicum HOM05D006471 ORTHO05D008157 2.1e-115 419.9 312 66.0
EL10Ac9g22981 Beta vulgaris HOM05D006471 ORTHO05D008157 2.8e-115 419.5 379 59.6
Lj5g0013377 Lotus japonicus HOM05D006471 ORTHO05D008157 8.0e-115 417.9 372 61.0
Thhalv10013886m.g Eutrema salsugineum HOM05D006471 ORTHO05D008157 1.0e-114 417.5 373 58.7
Gohir.A04G109424 Gossypium hirsutum HOM05D006471 ORTHO05D008157 2.3e-114 416.4 307 67.8
CARHR204730 Cardamine hirsuta HOM05D006471 ORTHO05D008157 3.0e-114 416.0 372 58.3
TPR.G4059 Trifolium pratense HOM05D006471 ORTHO05D008157 5.2e-114 415.2 370 60.0
CsaV3_5G029010 Cucumis sativus L. HOM05D006471 ORTHO05D008157 6.8e-114 414.8 377 58.6
PGSC0003DMG400011512 Solanum tuberosum HOM05D006471 ORTHO05D008157 6.8e-114 414.8 308 67.2
Gorai.012G135400 Gossypium raimondii HOM05D006471 ORTHO05D008157 8.9e-114 414.5 307 67.1
VMungo0720G2382 Vigna mungo HOM05D006471 ORTHO05D008157 1.5e-113 413.7 366 59.6
AUR62017731 Chenopodium quinoa HOM05D006471 ORTHO05D008157 2.0e-113 413.3 307 66.8
Glyma.10G286400 Glycine max HOM05D006471 ORTHO05D008157 2.6e-113 412.9 375 58.9
MSTRG.428 Avicennia marina HOM05D006471 ORTHO05D008157 5.7e-113 411.8 299 66.9
GSVIVG01034416001 Vitis vinifera HOM05D006471 ORTHO05D008157 7.5e-113 411.4 281 72.2
Aqoxy2G01235 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 1.3e-112 410.6 295 68.1
Duzib248G0471 Durio zibethinus HOM05D000200 ORTHO05D001546 1.3e-112 410.6 291 69.4
Medtr1g114560 Medicago truncatula HOM05D006471 ORTHO05D008157 1.3e-112 410.6 370 60.3
Gohir.D04G148900 Gossypium hirsutum HOM05D006471 ORTHO05D008157 2.9e-112 409.5 307 66.4
Aqoxy2G00030 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 4.9e-112 408.7 293 68.6
MD16G1004200 Malus domestica HOM05D006471 ORTHO05D008157 6.4e-112 408.3 309 67.6
Peaxi162Scf00681g00221 Petunia axillaris HOM05D006471 ORTHO05D008157 6.4e-112 408.3 365 59.5
CAN.G274.15 Capsicum annuum HOM05D006471 ORTHO05D008157 8.3e-112 407.9 316 64.2
Rhsim12G0193800 Rhododendron simsii HOM05D006471 ORTHO05D008157 1.1e-111 407.5 290 68.3
Phvul.007G014500 Phaseolus vulgaris HOM05D006471 ORTHO05D008157 1.4e-111 407.1 368 57.9
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 7.0e-111 404.8 374 56.4
Nitab4.5_0005997g0050 Nicotiana tabacum HOM05D006471 ORTHO05D008157 7.0e-111 404.8 351 61.8
DCAR_002605 Daucus carota HOM05D000200 ORTHO05D001546 1.2e-110 404.1 303 66.0
Carub.0006s0724 Capsella rubella HOM05D006471 ORTHO05D008157 2.0e-110 403.3 381 57.0
AUR62032950 Chenopodium quinoa HOM05D006471 ORTHO05D008157 3.5e-110 402.5 290 69.3
FvH4_4g37140 Fragaria vesca HOM05D006471 ORTHO05D008157 4.6e-110 402.1 302 66.2
Eucgr.G02586 Eucalyptus grandis HOM05D006471 ORTHO05D008157 1.3e-109 400.6 303 66.3
Sp6g34600 Schrenkiella parvula HOM05D006471 ORTHO05D008157 1.7e-109 400.2 373 56.6
AL6G18780 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 3.0e-109 399.4 376 56.6
MSTRG.8091 Avicennia marina HOM05D006471 ORTHO05D008157 1.9e-108 396.7 298 66.8
BcaB01g05611 Brassica carinata HOM05D006471 ORTHO05D008157 1.9e-108 396.7 374 57.5
C03p04260 Brassica napus HOM05D006471 ORTHO05D008157 4.3e-108 395.6 354 58.8
BolC3t12958H Brassica oleracea HOM05D006471 ORTHO05D008157 4.3e-108 395.6 354 58.8
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 5.6e-108 395.2 364 60.2
A03p03780 Brassica napus HOM05D006471 ORTHO05D008157 5.6e-108 395.2 354 59.0
BraA03t09725Z Brassica rapa HOM05D006471 ORTHO05D008157 5.6e-108 395.2 354 58.8
Nitab4.5_0004979g0070 Nicotiana tabacum HOM05D006471 ORTHO05D008157 5.6e-108 395.2 351 60.4
SalBow2G1748 Salvia bowleyana HOM05D006471 ORTHO05D008157 5.6e-108 395.2 301 64.8
ClCG02G014150 Citrullus lanatus HOM05D006471 ORTHO05D008157 7.3e-108 394.8 423 52.2
PGR142G1667 Punica granatum HOM05D006471 ORTHO05D008157 7.3e-108 394.8 384 58.1
Ca_11258_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 1.2e-107 394.0 290 67.9
BcaB01g05607 Brassica carinata HOM05D006471 ORTHO05D008157 1.6e-107 393.7 293 65.2
AT5G08340 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 2.1e-107 393.3 375 57.1
Sc10g0006980 Simmondsia chinensis HOM05D006471 ORTHO05D008157 2.1e-107 393.3 285 68.8
Lalb_Chr06g0163931 Lupinus albus HOM05D006471 ORTHO05D008157 6.2e-107 391.7 338 61.5
Ah.16g106450 Amaranthus hybridus HOM05D000154 ORTHO05D000092 1.1e-106 391.0 306 66.0
THA.LOC104800739 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 1.8e-106 390.2 313 62.9
HanXRQChr03g0076951 Helianthus annuus HOM05D006471 ORTHO05D008157 3.1e-106 389.4 288 67.4
AT5G23330 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 4.0e-106 389.0 333 58.3
Lj3A846G60 Lonicera japonica HOM05D006471 ORTHO05D008157 6.8e-106 388.3 272 69.1
Sed0003381 Sechium edule HOM05D006471 ORTHO05D008157 8.9e-106 387.9 301 65.1
Migut.L00869 Erythranthe guttata HOM05D006471 ORTHO05D008157 3.7e-104 382.5 303 65.0
SGA_v2.0_scaffold92G28263 Striga asiatica HOM05D006471 ORTHO05D008157 1.1e-103 380.9 307 62.9
THA.LOC104818378 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 1.9e-103 380.2 378 55.0
Lsat_1_v5_gn_0_15460 Lactuca sativa HOM05D006471 ORTHO05D008157 3.2e-103 379.4 291 66.7
vmacro16923 Vaccinium macrocarpon HOM05D006471 ORTHO05D008157 1.2e-102 377.5 274 67.2
AL6G34590 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 6.0e-102 375.2 305 62.0
Cc00_g09970 Coffea canephora HOM05D006471 ORTHO05D008157 5.6e-100 368.6 309 62.8
ATR0665G473 Amborella trichopoda HOM05D006471 ORTHO05D008157 1.2e-99 367.5 280 66.4
Oeu006329.1 Olea europaea HOM05D006471 ORTHO05D008157 8.1e-99 364.8 298 64.4
CDE02G4670 Ceratophyllum demersum HOM05D006471 ORTHO05D008157 1.8e-98 363.6 290 62.1
MELO3C011756.2 Cucumis melo HOM05D006471 ORTHO05D008157 4.0e-98 362.5 474 46.2
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 4.0e-98 362.5 304 60.9
CARHR190210 Cardamine hirsuta HOM05D006471 ORTHO05D008157 1.5e-97 360.5 290 62.8
ECA240G3241 Erigeron canadensis HOM05D006471 ORTHO05D008157 3.9e-93 345.9 246 69.9
SGA_v2.0_scaffold42G16129 Striga asiatica HOM05D006471 ORTHO05D008157 4.3e-92 342.4 373 51.2
arahy.Tifrunner.gnm1.ann1.V4ETXF Arachis hypogaea HOM05D006471 ORTHO05D008157 9.5e-92 341.3 480 46.2
FAN17G0671 Fragaria x ananassa HOM05D006471 ORTHO05D008157 2.8e-91 339.7 259 66.0
QL08p056974 Quercus lobata HOM05D006471 ORTHO05D008157 4.0e-90 335.9 227 72.2
Zm00001eb061200 Zea mays HOM05D006471 ORTHO05D008157 4.0e-90 335.9 284 62.0
Os03g0801700 Oryza sativa ssp. japonica HOM05D006471 ORTHO05D008157 2.0e-89 333.6 283 59.7
Prupe.1G349200 Prunus persica HOM05D006471 ORTHO05D008157 1.7e-88 330.5 239 68.6
unitig_749.g13340 Utricularia gibba HOM05D006471 ORTHO05D008157 2.2e-88 330.1 262 64.9
FAN07G1501 Fragaria x ananassa HOM05D002605 ORTHO05D002842 3.8e-88 329.3 238 68.1
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.3e-85 320.9 244 65.2
HPP92_017784 Vanilla planifolia HOM05D006471 ORTHO05D008157 1.6e-83 313.9 323 52.0
SEGI_40912 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 2.7e-78 296.6 341 50.4
MD13G1003200 Malus domestica HOM05D006471 ORTHO05D008157 6.0e-78 295.4 188 76.6
Pp3c5_28930 Physcomitrium patens HOM05D006471 ORTHO05D008157 7.9e-70 268.5 227 60.4
Carub.0006s2111 Capsella rubella HOM05D006471 ORTHO05D008157 1.8e-69 267.3 232 58.2
Mapoly0019s0104 Marchantia polymorpha HOM05D006471 ORTHO05D008157 7.6e-65 251.9 231 54.1
SMO141G0020 Selaginella moellendorffii HOM05D006471 ORTHO05D008157 1.3e-61 241.1 190 60.0
Glyma.20G102800 Glycine max HOM05D006471 ORTHO05D008157 8.7e-61 238.4 303 45.5
Pp3c14_5150 Physcomitrium patens HOM05D006471 ORTHO05D008157 1.9e-60 237.3 270 48.1
AagrBONN_evm.TU.Sc2ySwM_362.1554 Anthoceros agrestis HOM05D006471 ORTHO05D008157 2.4e-42 177.2 166 53.0
MCO07G267 Micromonas commoda HOM05D006471 ORTHO05D008157 8.5e-40 168.7 200 46.5
FAN12G2193 Fragaria x ananassa HOM05D006471 ORTHO05D008157 4.2e-39 166.4 136 62.5
Sc06g0004050 Simmondsia chinensis HOM05D006471 ORTHO05D008157 3.3e-36 156.8 143 61.5
QL08p056966 Quercus lobata HOM05D006471 ORTHO05D008157 4.2e-23 113.2 68 77.9
Cre13.g607600 Chlamydomonas reinhardtii HOM05D006471 ORTHO05D008157 7.2e-23 112.5 341 28.2
Carub.0006s2110 Capsella rubella HOM05D006471 ORTHO05D008157 2.1e-22 110.9 98 60.2
BolC9t53696H Brassica oleracea HOM05D006471 ORTHO05D008157 2.6e-12 77.4 84 50.0
arahy.Tifrunner.gnm1.ann1.SQAN1F Arachis hypogaea HOM05D006471 ORTHO05D008157 3.4e-12 77.0 46 78.3
SEGI_34336 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 1.6e-06 58.2 71 47.9


User provided reference genes

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