Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 7.1e-108 394.0 213 100.0
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 1.1e-87 327.0 213 84.0
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 5.5e-76 288.1 195 79.0
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 5.1e-74 281.6 211 71.1
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 2.4e-71 272.7 200 73.5
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 1.2e-70 270.4 197 74.6
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 2.0e-70 269.6 194 73.2
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 4.5e-70 268.5 198 71.7
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 7.7e-70 267.7 208 68.3
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 1.0e-69 267.3 212 67.5
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 1.3e-69 266.9 212 68.4
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 2.2e-69 266.2 210 69.5
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 2.5e-68 262.7 211 69.2
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 3.2e-68 262.3 210 67.1
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 5.5e-68 261.5 207 67.1
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 5.5e-68 261.5 212 67.5
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 5.5e-68 261.5 185 73.0
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 7.2e-68 261.2 219 67.1
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 1.2e-67 260.4 214 67.3
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 1.2e-67 260.4 208 68.8
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 1.2e-67 260.4 197 70.1
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.6e-67 260.0 209 67.9
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.1e-67 259.6 207 66.7
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 6.1e-67 258.1 197 69.0
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 7.9e-67 257.7 195 71.8
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 7.9e-67 257.7 197 69.5
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.0e-66 257.3 197 70.6
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 1.0e-66 257.3 186 72.0
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 1.0e-66 257.3 199 71.4
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 1.4e-66 256.9 214 66.8
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.4e-66 256.9 207 66.2
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 1.4e-66 256.9 205 68.3
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 1.8e-66 256.5 212 66.5
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.8e-66 256.5 208 67.3
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 2.3e-66 256.1 208 65.9
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 1.1e-65 253.8 212 67.0
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 1.5e-65 253.4 212 64.6
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.5e-65 253.4 212 64.6
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 2.0e-65 253.1 202 67.8
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 2.5e-65 252.7 209 64.6
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 2.5e-65 252.7 197 68.0
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 3.3e-65 252.3 236 61.9
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 3.3e-65 252.3 194 67.0
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 7.4e-65 251.1 235 61.7
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 9.7e-65 250.8 194 66.5
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 2.8e-64 249.2 198 68.7
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 3.7e-64 248.8 197 67.0
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 4.8e-64 248.4 197 67.0
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 6.3e-64 248.1 186 67.2
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 8.2e-64 247.7 223 62.3
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 1.4e-63 246.9 186 69.9
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 2.4e-63 246.1 197 66.5
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 4.1e-63 245.4 185 68.6
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 9.1e-63 244.2 197 66.0
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 3.8e-61 238.8 213 61.5
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 5.0e-61 238.4 227 58.1
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 6.5e-61 238.0 213 62.4
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 6.5e-61 238.0 196 64.3
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 1.4e-60 236.9 185 71.4
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 3.2e-60 235.7 196 64.8
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 1.2e-59 233.8 212 59.9
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 3.6e-59 232.3 196 62.8
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 4.7e-59 231.9 213 63.4
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 1.0e-58 230.7 197 62.4
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 3.0e-58 229.2 183 66.1
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 3.0e-58 229.2 187 63.6
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 3.0e-58 229.2 211 61.6
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 3.9e-58 228.8 187 63.6
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 3.9e-58 228.8 187 63.6
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 5.1e-58 228.4 188 64.4
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 3.3e-57 225.7 181 67.4
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 5.7e-57 224.9 196 63.8
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 7.4e-57 224.6 186 62.9
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 1.3e-56 223.8 197 61.9
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 1.7e-56 223.4 196 63.3
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 3.7e-56 222.2 211 61.6
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 4.8e-56 221.9 195 63.6
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 8.2e-56 221.1 196 63.3
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 4.1e-55 218.8 202 62.4
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 1.2e-54 217.2 191 60.7
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 2.0e-54 216.5 200 62.0
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 2.6e-54 216.1 188 61.7
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 2.6e-54 216.1 188 61.7
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 2.6e-54 216.1 188 61.7
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.3e-53 213.8 199 59.8
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.7e-53 213.4 158 69.6
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 5.0e-53 211.8 158 69.6
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 1.1e-52 210.7 148 71.6
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 1.9e-52 209.9 198 60.1
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 2.5e-52 209.5 206 55.8
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 3.2e-52 209.1 250 51.6
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 5.5e-52 208.4 153 70.6
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 5.5e-52 208.4 206 55.3
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 7.2e-52 208.0 190 60.5
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 7.2e-52 208.0 190 60.5
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 7.2e-52 208.0 190 60.5
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 9.4e-52 207.6 186 60.2
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 9.4e-52 207.6 143 74.8
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.2e-51 207.2 153 70.6
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 8.0e-51 204.5 172 62.8
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 8.0e-51 204.5 172 62.8
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 1.0e-50 204.1 211 56.9
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 1.1e-47 194.1 144 67.4
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 7.0e-47 191.4 139 69.8
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 2.0e-46 189.9 131 75.6
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 1.0e-45 187.6 209 51.2
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 8.5e-45 184.5 181 54.1
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 1.0e-42 177.6 116 75.0
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 1.8e-42 176.8 186 51.1
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 2.3e-42 176.4 112 74.1
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 2.3e-42 176.4 118 72.0
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 2.3e-42 176.4 200 54.0
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 4.1e-39 165.6 143 65.0
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 1.9e-36 156.8 122 72.1
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 5.5e-36 155.2 137 62.8
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 1.7e-32 143.7 120 61.7
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 3.3e-28 129.4 85 75.3
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 7.3e-28 128.3 215 38.6
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.6e-27 127.1 85 74.1
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.4e-26 124.0 99 66.7
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 1.4e-26 124.0 113 60.2
Sc09g0006730 Simmondsia chinensis HOM05D005734 ORTHO05D006990 4.0e-26 122.5 85 71.8
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 4.4e-25 119.0 207 34.3
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 4.1e-23 112.5 149 49.7
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 1.2e-22 110.9 200 33.0
BraA09t36646Z Brassica rapa HOM05D005734 ORTHO05D006990 1.6e-22 110.5 96 59.4
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 7.8e-22 108.2 121 48.8
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 3.0e-21 106.3 151 46.4
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 1.9e-20 103.6 70 72.9
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 2.1e-19 100.1 82 59.8
Lj2C474G2 Lonicera japonica HOM05D005734 ORTHO05D006990 2.3e-18 96.7 62 77.4
RcHm_v2.0_Chr2g0126361 Rosa chinensis HOM05D005734 ORTHO05D006990 1.5e-17 94.0 65 69.2
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 2.0e-17 93.6 119 39.5
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 8.3e-16 88.2 74 60.8
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 8.6e-13 78.2 140 34.3
Eucgr.L03507 Eucalyptus grandis HOM05D005734 ORTHO05D006990 2.2e-08 63.5 82 45.1


User provided reference genes

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