Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0250 Trochodendron aralioides HOM05D007989 ORTHO05D010087 1.6e-135 486.1 245 100.0
Nn1g05466 Nelumbo nucifera HOM05D007989 ORTHO05D010087 1.2e-53 214.2 244 52.9
Aqoxy6G00707 Aquilegia oxysepala HOM05D007989 ORTHO05D010087 2.0e-37 160.2 251 43.8
PSO541G3922 Papaver somniferum HOM05D007989 ORTHO05D010087 1.1e-35 154.5 195 49.7
PSO675G2967 Papaver somniferum HOM05D007989 ORTHO05D010087 4.1e-35 152.5 199 48.7
Dinv08871 Davidia involucrata HOM05D007989 ORTHO05D010087 2.3e-33 146.7 195 47.7
Haze_24825 Corylus avellana HOM05D007989 ORTHO05D010087 3.3e-32 142.9 181 49.2
Haze_24830 Corylus avellana HOM05D007989 ORTHO05D010087 3.3e-32 142.9 181 49.2
Cfa002588 Carpinus fangiana HOM05D007989 ORTHO05D010087 1.1e-30 137.9 178 48.3
MBI06_g03317_MAGBIO Magnolia biondii HOM05D007989 ORTHO05D010087 1.4e-30 137.5 186 45.2
Thecc.01G095100 Theobroma cacao HOM05D007989 ORTHO05D010087 1.8e-30 137.1 188 45.2
Duzib147G0239 Durio zibethinus HOM05D007989 ORTHO05D010087 5.2e-30 135.6 190 44.2
CiPaw.03G146300 Carya illinoinensis HOM05D007989 ORTHO05D010087 8.9e-30 134.8 181 47.0
COL.COLO4_27300 Corchorus olitorius HOM05D007989 ORTHO05D010087 2.6e-29 133.3 186 43.5
TWI53G0073 Tripterygium wilfordii HOM05D007989 ORTHO05D010087 1.3e-28 131.0 196 42.9
Manes.13G097300 Manihot esculenta HOM05D007989 ORTHO05D010087 1.7e-28 130.6 183 44.8
QL06p047951 Quercus lobata HOM05D007989 ORTHO05D010087 2.9e-28 129.8 178 46.1
Prupe.6G193900 Prunus persica HOM05D007989 ORTHO05D010087 4.9e-28 129.0 198 44.9
CiPaw.04G104100 Carya illinoinensis HOM05D007989 ORTHO05D010087 1.9e-27 127.1 207 42.0
Ciclev10026467m.g Citrus clementina HOM05D007989 ORTHO05D010087 5.4e-27 125.6 180 45.6
Nitab4.5_0005930g0030 Nicotiana tabacum HOM05D007989 ORTHO05D010087 7.1e-27 125.2 177 42.9
MD01G1036700 Malus domestica HOM05D007989 ORTHO05D010087 9.2e-27 124.8 187 43.9
Potri.007G097400 Populus trichocarpa HOM05D007989 ORTHO05D010087 9.2e-27 124.8 201 39.8
Atru.chr3.1338 Acer truncatum HOM05D007989 ORTHO05D010087 1.2e-26 124.4 182 45.1
Sabra07G0080700 Salix brachista HOM05D007989 ORTHO05D010087 2.1e-26 123.6 194 42.3
FvH4_1g20210 Fragaria vesca HOM05D007989 ORTHO05D010087 6.0e-26 122.1 181 46.4
FAN19G2348 Fragaria x ananassa HOM05D007989 ORTHO05D010087 7.8e-26 121.7 181 46.4
Potri.005G071400 Populus trichocarpa HOM05D007989 ORTHO05D010087 1.0e-25 121.3 195 41.0
Cpa.g.sc55.66 Carica papaya HOM05D007989 ORTHO05D010087 1.3e-25 120.9 174 46.0
MD15G1317900 Malus domestica HOM05D007989 ORTHO05D010087 1.7e-25 120.6 184 42.9
Sabra05G0058400 Salix brachista HOM05D007989 ORTHO05D010087 1.7e-25 120.6 196 41.8
FAN26G0087 Fragaria x ananassa HOM05D007989 ORTHO05D010087 3.0e-25 119.8 171 46.2
FAN23G0861 Fragaria x ananassa HOM05D007989 ORTHO05D010087 3.9e-25 119.4 178 46.1
Rhsim10G0168900 Rhododendron simsii HOM05D007989 ORTHO05D010087 1.9e-24 117.1 146 51.4
Nitab4.5_0000241g0120 Nicotiana tabacum HOM05D007989 ORTHO05D010087 3.3e-24 116.3 179 40.8
RcHm_v2.0_Chr2g0112271 Rosa chinensis HOM05D007989 ORTHO05D010087 5.6e-24 115.5 191 42.9
Gohir.D03G040900 Gossypium hirsutum HOM05D007989 ORTHO05D010087 7.3e-24 115.2 193 40.4
FAN28G0040 Fragaria x ananassa HOM05D007989 ORTHO05D010087 1.6e-23 114.0 171 45.0
Gohir.A02G130000 Gossypium hirsutum HOM05D007989 ORTHO05D010087 1.6e-23 114.0 191 40.3
Gorai.003G041700 Gossypium raimondii HOM05D007989 ORTHO05D010087 2.1e-23 113.6 193 40.4
Actinidia06535 Actinidia chinensis HOM05D007989 ORTHO05D010087 3.1e-22 109.8 154 48.7
CANSAT01G0464 Cannabis sativa HOM05D007989 ORTHO05D010087 4.0e-22 109.4 186 41.4
Hma1.2p1_0019F.1_g013880 Hydrangea macrophylla HOM05D007989 ORTHO05D010087 5.2e-22 109.0 176 44.9
CAN.G905.6 Capsicum annuum HOM05D007989 ORTHO05D010087 6.8e-22 108.6 166 41.0
AUR62027199 Chenopodium quinoa HOM05D007989 ORTHO05D010087 8.9e-22 108.2 179 39.7
arahy.Tifrunner.gnm1.ann1.FU6RJX Arachis hypogaea HOM05D007989 ORTHO05D010087 2.0e-21 107.1 198 39.4
Glyma.18G014700 Glycine max HOM05D007989 ORTHO05D010087 3.4e-21 106.3 182 41.8
arahy.Tifrunner.gnm1.ann1.92LXSJ Arachis hypogaea HOM05D007989 ORTHO05D010087 4.4e-21 105.9 204 38.7
VMungo1383G0535 Vigna mungo HOM05D007989 ORTHO05D010087 4.4e-21 105.9 190 41.1
EL10Ac6g14814 Beta vulgaris HOM05D007989 ORTHO05D010087 7.6e-21 105.1 192 37.5
Phvul.001G254200 Phaseolus vulgaris HOM05D007989 ORTHO05D010087 7.6e-21 105.1 183 42.1
Lj6g0026253 Lotus japonicus HOM05D007989 ORTHO05D010087 1.7e-20 104.0 180 42.8
vmacro12990 Vaccinium macrocarpon HOM05D007989 ORTHO05D010087 2.2e-20 103.6 126 51.6
Migut.H02322 Erythranthe guttata HOM05D007989 ORTHO05D010087 8.4e-20 101.7 172 39.5
Psat1g083960 Pisum sativum HOM05D007989 ORTHO05D010087 1.9e-19 100.5 176 40.9
Medtr3g086760 Medicago truncatula HOM05D007989 ORTHO05D010087 2.4e-19 100.1 190 40.5
TPR.G30536 Trifolium pratense HOM05D007989 ORTHO05D010087 5.4e-19 99.0 182 39.6
Glyma.11G242400 Glycine max HOM05D007989 ORTHO05D010087 4.6e-18 95.9 180 38.9
Ca_30637_v3 Cicer arietinum L. HOM05D007989 ORTHO05D010087 8.7e-17 91.7 177 37.3
Lalb_Chr08g0230941 Lupinus albus HOM05D007989 ORTHO05D010087 4.7e-15 85.9 127 48.8
HPP92_002319 Vanilla planifolia HOM05D007989 ORTHO05D010087 6.2e-15 85.5 172 34.9
PGR004G2401 Punica granatum HOM05D007989 ORTHO05D010087 3.1e-14 83.2 153 39.2
Sopen11g005100 Solanum pennellii HOM05D007989 ORTHO05D010087 6.9e-14 82.0 173 36.4
PGSC0003DMG401016146 Solanum tuberosum HOM05D007989 ORTHO05D010087 6.9e-14 82.0 173 36.4
Sp1g01040 Schrenkiella parvula HOM05D002476 ORTHO05D002652 5.8e-13 79.0 269 27.9
Oeu002158.1 Olea europaea HOM05D007989 ORTHO05D010087 1.7e-12 77.4 115 43.5
Solyc11g010320.1 Solanum lycopersicum HOM05D007989 ORTHO05D010087 3.8e-12 76.3 170 34.7
AT1G01240 Arabidopsis thaliana HOM05D002476 ORTHO05D002652 1.1e-11 74.7 260 26.5
A10p00670 Brassica napus HOM05D002476 ORTHO05D002652 2.4e-11 73.6 226 27.4
Carub.0001s0097 Capsella rubella HOM05D002476 ORTHO05D002652 7.1e-11 72.0 218 28.9
Zm00001eb033460 Zea mays HOM05D007989 ORTHO05D010087 1.2e-10 71.2 153 36.6
Sc16g0000320 Simmondsia chinensis HOM05D007989 ORTHO05D010087 2.1e-10 70.5 132 37.9
MELO3C018999.2 Cucumis melo HOM05D007989 ORTHO05D010087 2.7e-10 70.1 180 35.0
CARHR001220 Cardamine hirsuta HOM05D002476 ORTHO05D002652 3.5e-10 69.7 215 27.4
C05p00710 Brassica napus HOM05D002476 ORTHO05D002652 4.6e-10 69.3 154 31.8
Thhalv10008123m.g Eutrema salsugineum HOM05D002476 ORTHO05D002652 4.6e-10 69.3 217 27.6
Os08g0483100 Oryza sativa ssp. japonica HOM05D007989 ORTHO05D010087 6.0e-10 68.9 163 35.0
AL1G11220 Arabidopsis lyrata HOM05D002476 ORTHO05D002652 7.8e-10 68.6 264 27.3
ClCG10G008400 Citrullus lanatus HOM05D007989 ORTHO05D010087 7.8e-10 68.6 122 40.2
Aa31LG1G10610 Aethionema arabicum HOM05D002476 ORTHO05D002652 1.0e-09 68.2 160 33.1
BraA09t42240Z Brassica rapa HOM05D002476 ORTHO05D002652 1.3e-09 67.8 193 30.6
CsaV3_4G009020 Cucumis sativus L. HOM05D007989 ORTHO05D010087 1.7e-09 67.4 164 36.0
A09p69030 Brassica napus HOM05D002476 ORTHO05D002652 3.0e-09 66.6 193 31.1
BraA10t42344Z Brassica rapa HOM05D002476 ORTHO05D002652 3.0e-09 66.6 261 28.0
BolC8t52874H Brassica oleracea HOM05D002476 ORTHO05D002652 3.9e-09 66.2 263 27.4
THA.LOC104825884 Tarenaya hassleriana HOM05D002476 ORTHO05D002652 5.6e-08 62.4 204 30.4
Ca_16505_v3 Cicer arietinum L. HOM05D007989 ORTHO05D010087 4.8e-07 59.3 125 36.0
Migut.N01533 Erythranthe guttata HOM05D002476 ORTHO05D002652 6.2e-07 58.9 169 29.0
Sed0027218 Sechium edule HOM05D007989 ORTHO05D010087 1.1e-06 58.2 67 49.3
THA.LOC104817374 Tarenaya hassleriana HOM05D002476 ORTHO05D002652 1.4e-06 57.8 225 28.4
AT2G46550 Arabidopsis thaliana HOM05D002476 ORTHO05D002652 3.1e-06 56.6 158 32.9
Sopen01g039820 Solanum pennellii HOM05D002476 ORTHO05D002652 5.3e-06 55.8 206 28.2
ATR0758G001 Amborella trichopoda HOM05D002476 ORTHO05D010087 6.9e-06 55.5 117 35.9
Lsat_1_v5_gn_7_880 Lactuca sativa HOM05D002476 ORTHO05D002652 6.9e-06 55.5 194 29.9
SalBow2G2074 Salvia bowleyana HOM05D002476 ORTHO05D002652 6.9e-06 55.5 115 40.0
Sp4g28600 Schrenkiella parvula HOM05D002476 ORTHO05D002652 6.9e-06 55.5 146 32.9


User provided reference genes

Program Settings