Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0242 Trochodendron aralioides HOM05D000276 ORTHO05D416007 2.1e-64 248.8 119 100.0
CSS0050163 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003669 2.6e-06 55.8 51 68.6
Dinv40110 Davidia involucrata HOM05D000276 ORTHO05D003669 2.6e-06 55.8 51 68.6
GSVIVG01018748001 Vitis vinifera HOM05D000276 ORTHO05D003669 2.6e-06 55.8 51 68.6
TAR376G0640 Trochodendron aralioides HOM05D000276 ORTHO05D003669 3.3e-06 55.5 45 75.6
CAN.G588.64 Capsicum annuum HOM05D000276 ORTHO05D003669 4.4e-06 55.1 51 64.7
Nn6g32009 Nelumbo nucifera HOM05D000276 ORTHO05D003669 4.4e-06 55.1 51 66.7
Rhsim10G0209800 Rhododendron simsii HOM05D000276 ORTHO05D003669 4.4e-06 55.1 50 68.0
vmacro22146 Vaccinium macrocarpon HOM05D000276 ORTHO05D003669 4.4e-06 55.1 50 68.0
arahy.Tifrunner.gnm1.ann1.D8AUH9 Arachis hypogaea HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
arahy.Tifrunner.gnm1.ann1.QX3B7H Arachis hypogaea HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Ca_03624_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Dinv33649 Davidia involucrata HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Duzib132G0276 Durio zibethinus HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Glyma.16G126200 Glycine max HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Hma1.2p1_0481F.1_g162170 Hydrangea macrophylla HOM05D000276 ORTHO05D003669 5.7e-06 54.7 50 68.0
Lj2A479T49 Lonicera japonica HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Lj4g0019541 Lotus japonicus HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Manes.11G094900 Manihot esculenta HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Peaxi162Scf00362g00836 Petunia axillaris HOM05D000276 ORTHO05D003669 5.7e-06 54.7 50 68.0
Sabra04G0116200 Salix brachista HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Thecc.01G015500 Theobroma cacao HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
Thecc.02G061500 Theobroma cacao HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
TPR.G19484 Trifolium pratense HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
TPR.G19488 Trifolium pratense HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
TPR.G25817 Trifolium pratense HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
TPR.G39008 Trifolium pratense HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 66.7
TAR381G1163 Trochodendron aralioides HOM05D000276 ORTHO05D003669 5.7e-06 54.7 51 70.6
Cfa006993 Carpinus fangiana HOM05D000276 ORTHO05D003669 7.4e-06 54.3 51 64.7
CDE04G3614 Ceratophyllum demersum HOM05D000276 ORTHO05D003669 7.4e-06 54.3 50 66.0
COL.COLO4_22453 Corchorus olitorius HOM05D000276 ORTHO05D003669 7.4e-06 54.3 51 66.7
HanXRQChr09g0256741 Helianthus annuus HOM05D000276 ORTHO05D003669 7.4e-06 54.3 44 75.0
Potri.009G133800 Populus trichocarpa HOM05D000276 ORTHO05D003669 7.4e-06 54.3 51 66.7
GSVIVG01024037001 Vitis vinifera HOM05D000276 ORTHO05D003669 7.4e-06 54.3 51 66.7
Aa31LG1G14640 Aethionema arabicum HOM05D000276 ORTHO05D003669 9.7e-06 53.9 52 65.4
AL8G45450 Arabidopsis lyrata HOM05D000276 ORTHO05D003669 9.7e-06 53.9 52 65.4
CARHR281600 Cardamine hirsuta HOM05D000276 ORTHO05D003669 9.7e-06 53.9 52 65.4
Cpa.g.sc6.278 Carica papaya HOM05D000276 ORTHO05D003669 9.7e-06 53.9 51 64.7
CDE02G4234 Ceratophyllum demersum HOM05D000276 ORTHO05D003669 9.7e-06 53.9 51 64.7
MELO3C007920.2 Cucumis melo HOM05D000276 ORTHO05D003669 9.7e-06 53.9 51 64.7
CsaV3_6G047290 Cucumis sativus L. HOM05D000276 ORTHO05D003669 9.7e-06 53.9 51 64.7
Thhalv10004818m.g Eutrema salsugineum HOM05D000276 ORTHO05D003669 9.7e-06 53.9 52 65.4
Thhalv10004820m.g Eutrema salsugineum HOM05D000276 ORTHO05D003669 9.7e-06 53.9 52 65.4
Lj4A222T50 Lonicera japonica HOM05D000276 ORTHO05D003669 9.7e-06 53.9 45 73.3
QL06p051000 Quercus lobata HOM05D000276 ORTHO05D003669 9.7e-06 53.9 51 64.7
Rhsim08G0032400 Rhododendron simsii HOM05D000276 ORTHO05D003669 9.7e-06 53.9 50 66.0


User provided reference genes

Program Settings