Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0209 Trochodendron aralioides HOM05D015137 ORTHO05D016484 2.0e-135 485.7 239 100.0
TAR628G0988 Trochodendron aralioides HOM05D015137 ORTHO05D016484 3.3e-85 318.9 169 96.4
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 9.5e-53 211.1 183 60.7
TAR625G0890 Trochodendron aralioides HOM05D015137 ORTHO05D000921 8.1e-44 181.4 206 51.5
TAR376G1148 Trochodendron aralioides HOM05D005641 ORTHO05D007953 1.6e-36 157.1 189 50.3
TAR624G0767 Trochodendron aralioides HOM05D015137 ORTHO05D013662 3.2e-32 142.9 173 50.9
TAR623G0959 Trochodendron aralioides HOM05D019442 ORTHO05D016484 6.2e-28 128.6 182 42.9
TAR419G0001 Trochodendron aralioides HOM05D019442 ORTHO05D000921 1.8e-27 127.1 166 47.0
TAR622G0184 Trochodendron aralioides HOM05D015137 ORTHO05D016484 7.6e-26 121.7 102 60.8
TAR629G1260 Trochodendron aralioides HOM05D000271 ORTHO05D002152 7.6e-26 121.7 159 47.2
TAR636G0587 Trochodendron aralioides HOM05D019442 ORTHO05D016484 4.3e-21 105.9 157 41.4
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 2.8e-20 103.2 194 37.1
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 4.8e-20 102.4 192 35.4
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 4.8e-20 102.4 190 35.3
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 4.8e-20 102.4 192 35.4
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 4.8e-20 102.4 192 35.4
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 2.4e-19 100.1 192 37.5
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 2.4e-19 100.1 190 36.3
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 1.2e-18 97.8 183 36.6
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 1.2e-18 97.8 183 36.6
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 2.0e-18 97.1 190 34.7
Dinv11546 Davidia involucrata HOM05D007209 ORTHO05D000921 2.9e-17 93.2 186 35.5
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 3.5e-15 86.3 192 34.9
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 4.6e-15 85.9 181 37.6
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 4.6e-15 85.9 185 33.5
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.9e-14 82.8 199 33.7
Aqoxy6G02328 Aquilegia oxysepala HOM05D000665 ORTHO05D000921 1.1e-13 81.3 190 32.6
CSS0046487 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.5e-13 80.9 187 34.2
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.5e-13 80.9 202 29.7
Dinv10275 Davidia involucrata HOM05D008473 ORTHO05D000921 3.3e-13 79.7 180 31.7
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 4.3e-13 79.3 201 34.3
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 9.7e-13 78.2 199 33.2
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 1.3e-12 77.8 200 32.0
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 1.6e-12 77.4 166 32.5
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 2.2e-12 77.0 199 31.2
CSS0039380 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.8e-12 76.6 194 30.4
CSS0009426 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.3e-12 75.5 194 30.4
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.3e-12 75.5 187 32.6
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-11 74.7 205 31.7
CSS0028686 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-11 74.7 205 31.7
TAR628G1412 Trochodendron aralioides HOM05D000665 ORTHO05D003147 1.4e-11 74.3 188 28.7
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 5.3e-11 72.4 189 34.9
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 5.3e-11 72.4 200 31.5
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 6.9e-11 72.0 182 28.6
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 6.9e-11 72.0 199 30.7
CSS0029683 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 9.0e-11 71.6 190 35.3
CSS0038075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 9.0e-11 71.6 194 29.9
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 9.0e-11 71.6 201 31.8
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 9.0e-11 71.6 201 31.8
CSS0044845 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.2e-10 71.2 184 28.8
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 1.5e-10 70.9 192 29.2
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.5e-10 70.9 200 31.0
CSS0047450 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.0e-10 70.5 190 35.3
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 2.0e-10 70.5 185 29.2
PSO782G4265 Papaver somniferum HOM05D000876 ORTHO05D000285 2.6e-10 70.1 224 29.9
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 2.6e-10 70.1 185 29.2
TAR625G0667 Trochodendron aralioides HOM05D015137 ORTHO05D013662 2.6e-10 70.1 111 44.1
PSO063G5726 Papaver somniferum HOM05D000876 ORTHO05D000285 3.4e-10 69.7 224 29.9
TAR383G0296 Trochodendron aralioides HOM05D019442 ORTHO05D016484 3.4e-10 69.7 85 49.4
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 4.5e-10 69.3 244 30.3
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.0e-09 68.2 178 27.5
TAR383G0712 Trochodendron aralioides HOM05D019442 ORTHO05D016484 1.0e-09 68.2 85 48.2
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 1.7e-09 67.4 194 27.3
TAR628G0739 Trochodendron aralioides HOM05D000665 ORTHO05D003147 2.9e-09 66.6 188 27.1
CSS0031995 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.8e-09 66.2 177 33.3
CANSAT21G1611 Cannabis sativa HOM05D007209 ORTHO05D000921 3.8e-09 66.2 179 27.9
Dinv15517 Davidia involucrata HOM05D008473 ORTHO05D000921 3.8e-09 66.2 104 32.7
Dinv21256 Davidia involucrata HOM05D008473 ORTHO05D000921 3.8e-09 66.2 104 32.7
Prupe.1G367200 Prunus persica HOM05D000665 ORTHO05D003147 3.8e-09 66.2 178 28.1
Dinv26654 Davidia involucrata HOM05D008473 ORTHO05D000921 5.0e-09 65.9 104 32.7
TAR374G1023 Trochodendron aralioides HOM05D000225 ORTHO05D001817 5.0e-09 65.9 124 37.9
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 6.5e-09 65.5 198 29.3
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 6.5e-09 65.5 188 28.7
PSO339G0519 Papaver somniferum HOM05D007209 ORTHO05D000921 6.5e-09 65.5 216 29.6
Aqoxy5G02830 Aquilegia oxysepala HOM05D007209 ORTHO05D000921 8.5e-09 65.1 178 27.5
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 8.5e-09 65.1 198 28.8
TAR622G0984 Trochodendron aralioides HOM05D011880 ORTHO05D015193 8.5e-09 65.1 200 28.5
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.1e-08 64.7 198 29.3
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 1.4e-08 64.3 162 29.0
PSO170G0901 Papaver somniferum HOM05D000665 ORTHO05D003147 1.4e-08 64.3 183 27.3
TAR636G0011 Trochodendron aralioides HOM05D015137 ORTHO05D016484 1.4e-08 64.3 81 51.9
COL.COLO4_05628 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.9e-08 63.9 186 28.0
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.9e-08 63.9 198 28.8
PSO170G5921 Papaver somniferum HOM05D000665 ORTHO05D003147 1.9e-08 63.9 180 27.8
Migut.H02178 Erythranthe guttata HOM05D000665 ORTHO05D003147 2.5e-08 63.5 192 26.6
Nn5g30764 Nelumbo nucifera HOM05D000665 ORTHO05D003147 2.5e-08 63.5 192 26.6
CSS0010680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.2e-08 63.2 190 27.4
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 3.2e-08 63.2 200 28.5
PSO541G6499 Papaver somniferum HOM05D000665 ORTHO05D003147 4.2e-08 62.8 183 27.3
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.2e-08 62.8 198 29.3
Cc01_g10760 Coffea canephora HOM05D000665 ORTHO05D000921 5.5e-08 62.4 198 25.3
Cc07_g11040 Coffea canephora HOM05D000665 ORTHO05D003147 5.5e-08 62.4 186 28.0
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 5.5e-08 62.4 192 26.6
Dinv30729 Davidia involucrata HOM05D008473 ORTHO05D000921 5.5e-08 62.4 154 27.3
PSO170G2007 Papaver somniferum HOM05D000665 ORTHO05D003147 5.5e-08 62.4 180 28.3
TPR.G9865 Trifolium pratense HOM05D003171 ORTHO05D000921 5.5e-08 62.4 72 43.1
HanXRQChr13g0396681 Helianthus annuus HOM05D000665 ORTHO05D000921 7.2e-08 62.0 192 29.7
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 7.2e-08 62.0 194 30.4
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 7.2e-08 62.0 179 30.7
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 7.2e-08 62.0 185 23.8
Zm00001eb300210 Zea mays HOM05D007295 ORTHO05D007705 9.4e-08 61.6 201 31.3
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 1.2e-07 61.2 194 25.8
CANSAT25G1420 Cannabis sativa HOM05D000665 ORTHO05D003147 1.2e-07 61.2 182 26.4
Dinv07352 Davidia involucrata HOM05D008473 ORTHO05D000921 1.2e-07 61.2 66 40.9
Dinv10828 Davidia involucrata HOM05D008473 ORTHO05D000921 1.2e-07 61.2 167 29.9
Nitab4.5_0002337g0110 Nicotiana tabacum HOM05D000665 ORTHO05D003147 1.2e-07 61.2 180 23.3
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 1.2e-07 61.2 188 31.4
GSVIVG01009883001 Vitis vinifera HOM05D000665 ORTHO05D003147 1.2e-07 61.2 196 25.5
CSS0032086 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 1.6e-07 60.8 179 29.6
CSS0040342 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.6e-07 60.8 187 26.7
Dinv01610 Davidia involucrata HOM05D008473 ORTHO05D000921 1.6e-07 60.8 66 40.9
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 1.6e-07 60.8 195 28.2
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 1.6e-07 60.8 195 28.2
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 2.1e-07 60.5 187 24.6
Oeu000369.1 Olea europaea HOM05D003171 ORTHO05D000921 2.1e-07 60.5 231 29.9
arahy.Tifrunner.gnm1.ann1.BDR352 Arachis hypogaea HOM05D000665 ORTHO05D003147 2.7e-07 60.1 186 26.9
arahy.Tifrunner.gnm1.ann1.Q4VSGN Arachis hypogaea HOM05D000665 ORTHO05D003147 2.7e-07 60.1 186 26.9
Dinv24312 Davidia involucrata HOM05D008473 ORTHO05D000921 2.7e-07 60.1 104 30.8
Dinv42478 Davidia involucrata HOM05D008473 ORTHO05D000921 2.7e-07 60.1 66 39.4
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 2.7e-07 60.1 200 26.0
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.7e-07 60.1 191 28.8
TAR626G0379 Trochodendron aralioides HOM05D019442 ORTHO05D016484 2.7e-07 60.1 74 50.0
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 3.6e-07 59.7 227 24.7
Nitab4.5_0000188g0150 Nicotiana tabacum HOM05D000665 ORTHO05D003147 3.6e-07 59.7 180 22.8
QL02p011365 Quercus lobata HOM05D000665 ORTHO05D003147 3.6e-07 59.7 176 25.0
Dinv13151 Davidia involucrata HOM05D002640 ORTHO05D003231 4.6e-07 59.3 72 37.5
Dinv22995 Davidia involucrata HOM05D007209 ORTHO05D000921 4.6e-07 59.3 131 31.3
Hma1.2p1_0638F.1_g193770 Hydrangea macrophylla HOM05D000665 ORTHO05D003147 4.6e-07 59.3 182 28.0
Manes.18G014700 Manihot esculenta HOM05D000665 ORTHO05D003147 4.6e-07 59.3 176 27.8
Actinidia17424 Actinidia chinensis HOM05D000665 ORTHO05D003147 6.1e-07 58.9 182 24.7
CSS0018305 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D003147 6.1e-07 58.9 187 24.6
Nn5g29893 Nelumbo nucifera HOM05D000665 ORTHO05D000140 6.1e-07 58.9 187 27.3
TPR.G10520 Trifolium pratense HOM05D000665 ORTHO05D003147 6.1e-07 58.9 185 25.9
CSS0007117 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 7.9e-07 58.5 174 30.5
Dinv38053 Davidia involucrata HOM05D008473 ORTHO05D000921 7.9e-07 58.5 66 39.4
Dinv44487 Davidia involucrata HOM05D008473 ORTHO05D000921 7.9e-07 58.5 66 39.4
Oeu025535.3 Olea europaea HOM05D000622 ORTHO05D000475 7.9e-07 58.5 211 29.9
Rhsim04G0014700 Rhododendron simsii HOM05D000665 ORTHO05D003147 7.9e-07 58.5 184 27.2
Medtr5g022570 Medicago truncatula HOM05D000665 ORTHO05D003147 1.0e-06 58.2 183 26.2
RcHm_v2.0_Chr2g0099061 Rosa chinensis HOM05D000665 ORTHO05D003147 1.0e-06 58.2 179 26.3
CSS0006884 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.4e-06 57.8 176 29.5
QL06p051064 Quercus lobata HOM05D000665 ORTHO05D003147 1.4e-06 57.8 180 26.1
vmacro22150 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 1.4e-06 57.8 183 21.3
CSS0001337 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D003147 1.8e-06 57.4 183 26.8
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.8e-06 57.4 189 25.9
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 1.8e-06 57.4 195 25.6
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 2.3e-06 57.0 191 27.7
Medtr1g024830 Medicago truncatula HOM05D000665 ORTHO05D003147 2.3e-06 57.0 182 25.8
PSO017G0419 Papaver somniferum HOM05D000665 ORTHO05D003147 2.3e-06 57.0 175 26.3
TWI12G0661 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 2.3e-06 57.0 164 29.3
vmacro21719 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 2.3e-06 57.0 178 28.7
Zm00001eb129150 Zea mays HOM05D007295 ORTHO05D007705 2.3e-06 57.0 180 30.0
Zm00001eb384140 Zea mays HOM05D007295 ORTHO05D007705 2.3e-06 57.0 186 30.6
ATR0585G101 Amborella trichopoda HOM05D000665 ORTHO05D000140 3.0e-06 56.6 184 25.0
MSTRG.1202 Avicennia marina HOM05D000665 ORTHO05D003147 3.0e-06 56.6 173 23.7
CAN.G1721.3 Capsicum annuum HOM05D000665 ORTHO05D003147 3.0e-06 56.6 168 24.4
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 3.0e-06 56.6 181 24.9
Dinv13155 Davidia involucrata HOM05D002640 ORTHO05D003231 3.0e-06 56.6 78 35.9
Dinv36872 Davidia involucrata HOM05D008473 ORTHO05D000921 3.0e-06 56.6 64 40.6
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 3.0e-06 56.6 75 38.7
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 3.0e-06 56.6 92 40.2
Nn6g32360 Nelumbo nucifera HOM05D000665 ORTHO05D003147 3.0e-06 56.6 187 24.1
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 3.9e-06 56.2 206 23.3
ECA233G4106 Erigeron canadensis HOM05D008473 ORTHO05D000921 3.9e-06 56.2 58 46.6
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 3.9e-06 56.2 201 29.4
vmacro05149 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 3.9e-06 56.2 186 28.0
CARHR069080 Cardamine hirsuta HOM05D000665 ORTHO05D003147 5.1e-06 55.8 183 25.1
PSO017G6967 Papaver somniferum HOM05D000665 ORTHO05D003147 5.1e-06 55.8 183 26.8
Rhsim06G0022500 Rhododendron simsii HOM05D000665 ORTHO05D003147 5.1e-06 55.8 172 28.5
PGSC0003DMG400041107 Solanum tuberosum HOM05D000665 ORTHO05D003147 5.1e-06 55.8 56 42.9
TPR.G34347 Trifolium pratense HOM05D000665 ORTHO05D003147 5.1e-06 55.8 178 25.8
MSTRG.25235 Avicennia marina HOM05D000665 ORTHO05D003147 6.7e-06 55.5 168 25.0
Ca_13420_v3 Cicer arietinum L. HOM05D000665 ORTHO05D003147 6.7e-06 55.5 173 26.0
Ca_24919_v3 Cicer arietinum L. HOM05D000665 ORTHO05D003147 6.7e-06 55.5 184 25.0
PSO716G0001 Papaver somniferum HOM05D000665 ORTHO05D003147 6.7e-06 55.5 166 27.1
Prupe.1G367300 Prunus persica HOM05D000665 ORTHO05D003147 6.7e-06 55.5 186 25.8
Zm00001eb279690 Zea mays HOM05D007295 ORTHO05D007705 6.7e-06 55.5 200 30.5
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 8.8e-06 55.1 189 26.5
Phvul.002G106800 Phaseolus vulgaris HOM05D000665 ORTHO05D003147 8.8e-06 55.1 185 24.9
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 8.8e-06 55.1 187 24.6
TWI56G0848 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 8.8e-06 55.1 160 28.1
TAR636G3565 Trochodendron aralioides HOM05D011880 ORTHO05D015193 8.8e-06 55.1 199 23.6


User provided reference genes

Program Settings