Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0193 Trochodendron aralioides HOM05D004637 ORTHO05D005320 2.6e-124 448.7 226 100.0
TAR628G0069 Trochodendron aralioides HOM05D004637 ORTHO05D005320 5.6e-111 404.4 208 99.0
Dinv35927 Davidia involucrata HOM05D004637 ORTHO05D005320 6.0e-97 357.8 220 81.8
Dinv39271 Davidia involucrata HOM05D004637 ORTHO05D005320 7.8e-97 357.5 220 81.8
Nn5g30394 Nelumbo nucifera HOM05D004637 ORTHO05D005320 1.1e-95 353.6 220 80.9
CSS0035210 Camellia sinensis var. sinensis HOM05D004637 ORTHO05D005320 2.5e-95 352.4 220 80.9
Actinidia08272 Actinidia chinensis HOM05D004637 ORTHO05D005320 4.3e-95 351.7 220 80.5
TAR381G1093 Trochodendron aralioides HOM05D004637 ORTHO05D005320 1.6e-94 349.7 220 80.0
GSVIVG01009436001 Vitis vinifera HOM05D004637 ORTHO05D005320 3.6e-94 348.6 220 79.1
Aqoxy5G01163 Aquilegia oxysepala HOM05D004637 ORTHO05D005320 6.2e-94 347.8 215 82.8
PSO170G3952 Papaver somniferum HOM05D004637 ORTHO05D005320 1.8e-93 346.3 220 78.6
PSO210G5934 Papaver somniferum HOM05D004637 ORTHO05D005320 2.3e-93 345.9 220 78.2
Hma1.2p1_0360F.1_g135900 Hydrangea macrophylla HOM05D004637 ORTHO05D005320 8.9e-93 344.0 220 79.1
Lj4A64T29 Lonicera japonica HOM05D004637 ORTHO05D005320 7.6e-92 340.9 204 82.8
Sed0017846 Sechium edule HOM05D004637 ORTHO05D005320 1.3e-91 340.1 220 75.0
Eucgr.F00183 Eucalyptus grandis HOM05D004637 ORTHO05D005320 2.2e-91 339.3 220 77.7
MSTRG.25070 Avicennia marina HOM05D004637 ORTHO05D005320 2.9e-91 339.0 220 76.8
Thecc.08G001300 Theobroma cacao HOM05D004637 ORTHO05D005320 2.9e-91 339.0 220 77.3
MELO3C010837.2 Cucumis melo HOM05D004637 ORTHO05D005320 3.7e-91 338.6 220 75.9
CsaV3_2G026470 Cucumis sativus L. HOM05D004637 ORTHO05D005320 3.7e-91 338.6 220 75.9
Potri.014G023800 Populus trichocarpa HOM05D004637 ORTHO05D005320 3.7e-91 338.6 220 77.3
Sabra14G0016200 Salix brachista HOM05D004637 ORTHO05D005320 4.9e-91 338.2 204 82.4
Gohir.A05G205600 Gossypium hirsutum HOM05D004637 ORTHO05D005320 6.4e-91 337.8 220 76.8
QL02p003978 Quercus lobata HOM05D004637 ORTHO05D005320 1.1e-90 337.0 220 75.5
Gohir.D05G208900 Gossypium hirsutum HOM05D004637 ORTHO05D005320 1.9e-90 336.3 220 76.8
Oeu045704.1 Olea europaea HOM05D004637 ORTHO05D005320 2.4e-90 335.9 203 82.3
Atru.chr13.748 Acer truncatum HOM05D004637 ORTHO05D005320 1.2e-89 333.6 220 75.9
Migut.N02728 Erythranthe guttata HOM05D004637 ORTHO05D005320 1.2e-89 333.6 220 75.9
CiPaw.15G052200 Carya illinoinensis HOM05D004637 ORTHO05D005320 3.5e-89 332.0 201 82.1
Cc10_g04860 Coffea canephora HOM05D004637 ORTHO05D005320 3.5e-89 332.0 217 76.0
Zm00001eb104960 Zea mays HOM05D004637 ORTHO05D005320 4.6e-89 331.6 205 79.0
Manes.05G177100 Manihot esculenta HOM05D004637 ORTHO05D005320 7.8e-89 330.9 220 74.1
Prupe.1G430800 Prunus persica HOM05D004637 ORTHO05D005320 1.0e-88 330.5 204 80.4
Gorai.009G215300 Gossypium raimondii HOM05D004637 ORTHO05D005320 1.3e-88 330.1 221 75.6
TWI36G0292 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 1.3e-88 330.1 220 74.1
Cfa018057 Carpinus fangiana HOM05D004637 ORTHO05D005320 1.7e-88 329.7 229 74.7
MD15G1077400 Malus domestica HOM05D004637 ORTHO05D005320 2.3e-88 329.3 204 78.4
CANSAT54G2334 Cannabis sativa HOM05D004637 ORTHO05D005320 7.3e-87 324.3 220 72.7
Os07g0479200 Oryza sativa ssp. japonica HOM05D004637 ORTHO05D005320 7.3e-87 324.3 215 74.4
Glyma.17G238800 Glycine max HOM05D004637 ORTHO05D005320 1.2e-86 323.6 208 76.0
MD08G1093700 Malus domestica HOM05D004637 ORTHO05D005320 1.2e-86 323.6 204 78.4
CAN.G1194.20 Capsicum annuum HOM05D004637 ORTHO05D005320 4.7e-86 321.6 212 75.0
Glyma.14G085900 Glycine max HOM05D004637 ORTHO05D005320 8.1e-86 320.9 208 75.0
Sopen12g030560 Solanum pennellii HOM05D004637 ORTHO05D005320 1.4e-85 320.1 217 73.3
PGSC0003DMG400015434 Solanum tuberosum HOM05D004637 ORTHO05D005320 1.4e-85 320.1 217 73.7
TWI56G1297 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 1.4e-85 320.1 220 72.7
ClCG08G016150 Citrullus lanatus HOM05D004637 ORTHO05D005320 2.4e-85 319.3 220 73.6
PGR031G3707 Punica granatum HOM05D004637 ORTHO05D005320 5.2e-85 318.2 218 73.9
TPR.G3787 Trifolium pratense HOM05D004637 ORTHO05D005320 5.2e-85 318.2 220 71.4
HanXRQChr10g0309661 Helianthus annuus HOM05D004637 ORTHO05D005320 8.9e-85 317.4 220 72.7
Psat6g015000 Pisum sativum HOM05D004637 ORTHO05D005320 8.9e-85 317.4 204 77.0
Lsat_1_v5_gn_1_22460 Lactuca sativa HOM05D004637 ORTHO05D005320 1.2e-84 317.0 220 72.3
Solyc12g088660.2 Solanum lycopersicum HOM05D004637 ORTHO05D005320 1.2e-84 317.0 217 72.4
THA.LOC104824981 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 1.2e-84 317.0 220 71.4
HPP92_003482 Vanilla planifolia HOM05D004637 ORTHO05D005320 3.4e-84 315.5 220 68.2
AL6G41290 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 4.4e-84 315.1 220 70.5
FvH4_2g33730 Fragaria vesca HOM05D004637 ORTHO05D005320 4.4e-84 315.1 208 74.5
AT4G07390 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 5.8e-84 314.7 220 70.5
Carub.0006s2649 Capsella rubella HOM05D004637 ORTHO05D005320 5.8e-84 314.7 220 70.0
Medtr1g018800 Medicago truncatula HOM05D004637 ORTHO05D005320 1.3e-83 313.5 206 75.7
Lj5g0011390 Lotus japonicus HOM05D004637 ORTHO05D005320 2.2e-83 312.8 208 75.5
CiPaw.16G038000 Carya illinoinensis HOM05D004637 ORTHO05D005320 2.9e-83 312.4 199 77.4
VMungo0647G2267 Vigna mungo HOM05D004637 ORTHO05D005320 2.9e-83 312.4 203 75.9
unitig_26.g9809 Utricularia gibba HOM05D004637 ORTHO05D005320 4.9e-83 311.6 215 72.6
THA.LOC104825764 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 6.4e-83 311.2 220 69.1
Phvul.001G024600 Phaseolus vulgaris HOM05D004637 ORTHO05D005320 1.9e-82 309.7 208 74.5
A03p27890 Brassica napus HOM05D004637 ORTHO05D005320 3.2e-82 308.9 220 69.5
BraA03t12001Z Brassica rapa HOM05D004637 ORTHO05D005320 3.2e-82 308.9 220 69.5
C03p33670 Brassica napus HOM05D004637 ORTHO05D005320 7.1e-82 307.8 220 69.5
BolC3t15687H Brassica oleracea HOM05D004637 ORTHO05D005320 7.1e-82 307.8 220 69.5
BcaB01g02883 Brassica carinata HOM05D004637 ORTHO05D005320 9.3e-82 307.4 220 69.5
FAN15G1438 Fragaria x ananassa HOM05D004637 ORTHO05D005320 9.3e-82 307.4 222 69.8
RcHm_v2.0_Chr6g0308821 Rosa chinensis HOM05D004637 ORTHO05D005320 1.2e-81 307.0 208 74.0
CARHR288440 Cardamine hirsuta HOM05D004637 ORTHO05D005320 1.6e-81 306.6 220 68.2
Thhalv10028929m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 2.7e-81 305.8 220 68.2
FAN27G2280 Fragaria x ananassa HOM05D004637 ORTHO05D005320 4.6e-81 305.1 229 68.1
CDE01G0812 Ceratophyllum demersum HOM05D004637 ORTHO05D005320 6.0e-81 304.7 212 72.2
Aa31LG8G3140 Aethionema arabicum HOM05D004637 ORTHO05D005320 1.0e-80 303.9 220 67.7
Ah.08g212480 Amaranthus hybridus HOM05D004637 ORTHO05D005320 2.3e-80 302.8 244 63.5
Sp6g10610 Schrenkiella parvula HOM05D004637 ORTHO05D005320 2.3e-80 302.8 220 68.6
Rhsim07G0225500 Rhododendron simsii HOM05D004637 ORTHO05D005320 5.1e-80 301.6 247 64.8
Eucgr.F02306 Eucalyptus grandis HOM05D004637 ORTHO05D005320 1.1e-79 300.4 220 68.2
Actinidia38079 Actinidia chinensis HOM05D004637 ORTHO05D005320 2.5e-79 299.3 189 80.4
Thhalv10015267m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 9.6e-79 297.4 214 68.7
PGR083G2827 Punica granatum HOM05D004637 ORTHO05D005320 3.6e-78 295.4 196 74.5
AL8G35940 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 1.4e-77 293.5 214 68.2
Sc02g0007520 Simmondsia chinensis HOM05D004637 ORTHO05D005320 3.1e-77 292.4 187 77.0
EL10As7g23788 Beta vulgaris HOM05D004637 ORTHO05D005320 1.2e-76 290.4 256 59.8
SEGI_04928 Sequoiadendron giganteum HOM05D004637 ORTHO05D005320 1.2e-76 290.4 203 69.0
Ciclev10002344m.g Citrus clementina HOM05D004637 ORTHO05D005320 2.0e-76 289.7 214 65.9
BcaC01g04795 Brassica carinata HOM05D004637 ORTHO05D005320 5.8e-76 288.1 213 67.6
RcHm_v2.0_Chr0c32g0501551 Rosa chinensis HOM05D004637 ORTHO05D005320 7.6e-76 287.7 187 75.4
Carub.0008s2014 Capsella rubella HOM05D004637 ORTHO05D005320 3.8e-75 285.4 220 63.2
arahy.Tifrunner.gnm1.ann1.RG91LC Arachis hypogaea HOM05D004637 ORTHO05D005320 4.9e-75 285.0 209 68.9
arahy.Tifrunner.gnm1.ann1.UI0UDP Arachis hypogaea HOM05D004637 ORTHO05D005320 4.9e-75 285.0 209 68.9
Nitab4.5_0006486g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 8.4e-75 284.3 208 70.2
CARHR285840 Cardamine hirsuta HOM05D004637 ORTHO05D005320 4.2e-74 282.0 220 64.1
Duzib093G0653 Durio zibethinus HOM05D004637 ORTHO05D005320 1.2e-73 280.4 220 66.8
Nitab4.5_0006004g0010 Nicotiana tabacum HOM05D004637 ORTHO05D005320 1.6e-73 280.0 217 66.8
Oeu037612.1 Olea europaea HOM05D004637 ORTHO05D005320 3.9e-72 275.4 166 82.5
BraA02t05792Z Brassica rapa HOM05D004637 ORTHO05D005320 9.6e-71 270.8 214 62.6
A02p07110 Brassica napus HOM05D004637 ORTHO05D005320 1.3e-70 270.4 214 62.6
BcaB05g22509 Brassica carinata HOM05D004637 ORTHO05D005320 4.8e-70 268.5 214 62.1
Manes.18G041200 Manihot esculenta HOM05D004637 ORTHO05D005320 4.8e-70 268.5 167 79.6
BcaC03g14011 Brassica carinata HOM05D004637 ORTHO05D005320 8.1e-70 267.7 214 61.2
BolC2t07347H Brassica oleracea HOM05D004637 ORTHO05D005320 8.1e-70 267.7 214 61.2
C02p12470 Brassica napus HOM05D004637 ORTHO05D005320 1.8e-69 266.5 214 60.7
ECA247G2514 Erigeron canadensis HOM05D004637 ORTHO05D005320 2.4e-69 266.2 186 71.5
SMO365G0080 Selaginella moellendorffii HOM05D004637 ORTHO05D005320 4.5e-68 261.9 214 60.3
FAN20G0860 Fragaria x ananassa HOM05D004637 ORTHO05D005320 5.8e-68 261.5 234 60.3
BolC3t13818H Brassica oleracea HOM05D004637 ORTHO05D005320 2.4e-66 256.1 209 59.8
Mapoly0040s0013 Marchantia polymorpha HOM05D004637 ORTHO05D005320 3.2e-66 255.8 224 56.7
Haze_18072 Corylus avellana HOM05D004637 ORTHO05D005320 5.5e-66 255.0 167 77.8
FAN24G1748 Fragaria x ananassa HOM05D004637 ORTHO05D005320 8.7e-64 247.7 205 64.4
Pp3c3_8350 Physcomitrium patens HOM05D004637 ORTHO05D005320 1.9e-63 246.5 208 58.7
vmacro21608 Vaccinium macrocarpon HOM05D004637 ORTHO05D005320 3.3e-63 245.7 151 82.8
HPP92_026880 Vanilla planifolia HOM05D004637 ORTHO05D005320 5.6e-63 245.0 171 68.4
Peaxi162Scf01087g00125 Petunia axillaris HOM05D004637 ORTHO05D005320 9.6e-63 244.2 172 72.1
Pp3c4_22670 Physcomitrium patens HOM05D004637 ORTHO05D005320 1.3e-62 243.8 210 57.6
Nitab4.5_0004339g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 1.1e-61 240.7 192 65.1
Peaxi162Scf00160g00034 Petunia axillaris HOM05D004637 ORTHO05D005320 1.4e-58 230.3 144 78.5
CBR_g40794 Chara braunii HOM05D004637 ORTHO05D005320 6.0e-57 224.9 198 57.6
Nitab4.5_0010118g0060 Nicotiana tabacum HOM05D004637 ORTHO05D005320 6.0e-57 224.9 221 57.5
CBR_g8228 Chara braunii HOM05D004637 ORTHO05D005320 4.8e-54 215.3 195 56.9
AagrBONN_evm.TU.Sc2ySwM_344.2883 Anthoceros agrestis HOM05D004637 ORTHO05D005320 1.8e-53 213.4 167 59.9
SalBow7G4009 Salvia bowleyana HOM05D004637 ORTHO05D005320 1.5e-47 193.7 126 78.6
Sp6g21160 Schrenkiella parvula HOM05D004637 ORTHO05D005320 8.2e-46 188.0 135 70.4
AT5G59470 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 2.6e-44 183.0 135 67.4
Cpa.g.sc21.155 Carica papaya HOM05D004637 ORTHO05D005320 5.5e-42 175.3 104 83.7
Hund04212 Selenicereus undatus HOM05D004637 ORTHO05D005320 4.3e-39 165.6 138 63.8
AUR62002897 Chenopodium quinoa HOM05D004637 ORTHO05D005320 1.3e-38 164.1 106 74.5
AUR62035253 Chenopodium quinoa HOM05D004637 ORTHO05D005320 1.3e-38 164.1 106 74.5
Lalb_Chr22g0354931 Lupinus albus HOM05D004637 ORTHO05D005320 1.3e-38 164.1 109 72.5
BcaC01g04787 Brassica carinata HOM05D004637 ORTHO05D005320 1.4e-37 160.6 100 78.0
QL07p047618 Quercus lobata HOM05D004637 ORTHO05D005320 9.1e-37 157.9 102 76.5
Lalb_Chr22g0354941 Lupinus albus HOM05D004637 ORTHO05D005320 4.5e-36 155.6 111 73.9
SGA_v2.0_scaffold588G53062 Striga asiatica HOM05D004637 ORTHO05D005320 1.7e-35 153.7 276 38.4
PRCOL_00005305 Prasinoderma coloniale HOM05D004637 ORTHO05D005320 4.4e-31 139.0 197 37.1
SGA_v2.0_scaffold137G35065 Striga asiatica HOM05D004637 ORTHO05D005320 5.7e-31 138.7 83 73.5
BcaB01g04583 Brassica carinata HOM05D004637 ORTHO05D005320 1.5e-23 114.0 122 48.4
Cre17.g722500 Chlamydomonas reinhardtii HOM05D004637 ORTHO05D005320 2.2e-22 110.2 181 35.4
QL11p041834 Quercus lobata HOM05D001716 ORTHO05D004234 1.1e-21 107.8 98 60.2
MCO13G491 Micromonas commoda HOM05D004637 ORTHO05D005320 5.9e-20 102.1 207 32.9
MCO13G508 Micromonas commoda HOM05D004637 ORTHO05D005320 5.9e-20 102.1 207 32.9
Cc02_g27600 Coffea canephora HOM05D004637 ORTHO05D005320 5.5e-18 95.5 74 60.8
Cre06.g261300 Chlamydomonas reinhardtii HOM05D004637 ORTHO05D005320 4.7e-17 92.4 170 32.4
RcHm_v2.0_Chr1g0356881 Rosa chinensis HOM05D004637 ORTHO05D005320 4.0e-16 89.4 51 84.3
COL.COLO4_10117 Corchorus olitorius HOM05D004637 ORTHO05D005320 2.2e-14 83.6 49 79.6
Peaxi162Scf00160g00035 Petunia axillaris HOM05D004637 ORTHO05D005320 7.0e-13 78.6 50 74.0
Ca_13257_v3 Cicer arietinum L. HOM05D004637 ORTHO05D005320 2.7e-12 76.6 48 68.8
BcaC01g06520 Brassica carinata HOM05D004637 ORTHO05D005320 2.5e-10 70.1 47 68.1
Peaxi162Scf00160g00024 Petunia axillaris HOM05D004637 ORTHO05D005320 1.8e-08 63.9 52 63.5
HPP92_014526 Vanilla planifolia HOM05D004637 ORTHO05D005320 3.0e-08 63.2 44 65.9
BcaB02g11171 Brassica carinata HOM05D037786 ORTHO05D091371 5.2e-08 62.4 50 52.0
Pp3c10_370 Physcomitrium patens HOM05D004637 ORTHO05D005320 3.4e-07 59.7 55 54.5


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