Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0188 Trochodendron aralioides HOM05D007384 ORTHO05D008511 1.1e-90 336.7 173 100.0
TAR520G0001 Trochodendron aralioides HOM05D007384 ORTHO05D008511 1.3e-88 329.7 173 98.3
Nn5g28918 Nelumbo nucifera HOM05D007384 ORTHO05D008511 3.2e-26 122.5 172 46.5
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 2.6e-20 102.8 174 40.8
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 2.9e-19 99.4 172 40.1
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 3.8e-19 99.0 167 41.9
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 1.5e-15 87.0 169 38.5
Hund19659 Selenicereus undatus HOM05D007384 ORTHO05D008511 1.3e-14 84.0 170 34.7
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 1.8e-13 80.1 169 34.3
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 1.2e-12 77.4 172 34.3
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 2.7e-12 76.3 160 37.5
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 2.7e-12 76.3 170 35.9
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 3.5e-12 75.9 170 32.4
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 5.9e-12 75.1 169 31.4
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 7.7e-12 74.7 174 31.0
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 1.0e-11 74.3 170 34.1
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 2.9e-11 72.8 174 32.2
EL10Ac6g14748 Beta vulgaris HOM05D007384 ORTHO05D008511 3.8e-11 72.4 169 33.1
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 3.8e-11 72.4 173 34.7
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 5.0e-11 72.0 166 36.1
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 8.5e-11 71.2 172 32.0
SalBow5G0260 Salvia bowleyana HOM05D007384 ORTHO05D008511 2.7e-09 66.2 172 30.2
SalBow5G4202 Salvia bowleyana HOM05D007384 ORTHO05D008511 2.7e-09 66.2 172 30.2
Lalb_Chr11g0068051 Lupinus albus HOM05D007384 ORTHO05D008511 3.6e-09 65.9 170 31.2
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 3.6e-09 65.9 170 29.4
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 1.0e-08 64.3 171 32.7
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 1.4e-08 63.9 160 30.6
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 1.4e-08 63.9 170 30.0
HanXRQChr10g0295241 Helianthus annuus HOM05D007384 ORTHO05D008511 1.4e-08 63.9 160 31.9
Sopen04g023570 Solanum pennellii HOM05D007384 ORTHO05D008511 1.4e-08 63.9 170 29.4
MSTRG.23314 Avicennia marina HOM05D007384 ORTHO05D008511 1.8e-08 63.5 170 28.2
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 1.8e-08 63.5 171 32.2
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 2.3e-08 63.2 164 33.5
CiPaw.04G092400 Carya illinoinensis HOM05D007384 ORTHO05D008511 4.0e-08 62.4 171 31.6
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 5.2e-08 62.0 170 29.4
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 5.2e-08 62.0 171 25.7
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 5.2e-08 62.0 170 28.8
Duzib147G1655 Durio zibethinus HOM05D007384 ORTHO05D008511 6.8e-08 61.6 87 47.1
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 1.5e-07 60.5 171 29.2
Oeu028376.1 Olea europaea HOM05D007384 ORTHO05D008511 1.5e-07 60.5 183 28.4
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 1.5e-07 60.5 166 30.7
arahy.Tifrunner.gnm1.ann1.66AXK3 Arachis hypogaea HOM05D007384 ORTHO05D008511 2.0e-07 60.1 171 30.4
Gorai.003G046900 Gossypium raimondii HOM05D007384 ORTHO05D008511 2.0e-07 60.1 168 33.9
Cfa002748 Carpinus fangiana HOM05D007384 ORTHO05D008511 2.6e-07 59.7 187 35.3
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 2.6e-07 59.7 171 32.2
MD01G1019000 Malus domestica HOM05D007384 ORTHO05D008511 2.6e-07 59.7 165 30.9
Oeu028378.1 Olea europaea HOM05D007384 ORTHO05D008511 2.6e-07 59.7 183 27.9
arahy.Tifrunner.gnm1.ann1.3HN607 Arachis hypogaea HOM05D007384 ORTHO05D008511 3.4e-07 59.3 176 30.1
Lalb_Chr07g0184821 Lupinus albus HOM05D007384 ORTHO05D008511 3.4e-07 59.3 168 30.4
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 4.4e-07 58.9 170 28.2
Aqoxy6G00490 Aquilegia oxysepala HOM05D007384 ORTHO05D008511 5.7e-07 58.5 179 31.3
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 5.7e-07 58.5 170 31.2
AT5G64880 Arabidopsis thaliana HOM05D012887 ORTHO05D008511 7.5e-07 58.2 171 32.2
QL06p032302 Quercus lobata HOM05D007384 ORTHO05D008511 7.5e-07 58.2 84 41.7
CSS0019294 Camellia sinensis var. sinensis HOM05D007384 ORTHO05D008511 1.3e-06 57.4 84 39.3
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 2.2e-06 56.6 184 29.9
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 3.7e-06 55.8 170 27.6
arahy.Tifrunner.gnm1.ann1.P053PK Arachis hypogaea HOM05D007384 ORTHO05D008511 4.9e-06 55.5 172 30.8
Sc07g0001520 Simmondsia chinensis HOM05D007384 ORTHO05D008511 6.3e-06 55.1 163 29.4
Hma1.2p1_0375F.1_g138660 Hydrangea macrophylla HOM05D007384 ORTHO05D008511 8.3e-06 54.7 51 52.9


User provided reference genes

Program Settings