Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 4.9e-70 267.7 136 100.0
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 3.8e-54 214.9 133 80.5
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 9.3e-53 210.3 137 81.8
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 2.7e-52 208.8 134 76.9
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 4.6e-52 208.0 137 77.4
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 1.7e-51 206.1 139 77.0
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 3.3e-50 201.8 145 77.2
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 9.6e-50 200.3 139 75.5
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 1.6e-49 199.5 135 74.8
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 1.6e-49 199.5 142 74.6
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 8.1e-49 197.2 141 73.0
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 8.1e-49 197.2 130 81.5
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 2.4e-48 195.7 141 73.8
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.4e-48 195.7 141 73.8
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 2.4e-48 195.7 133 75.9
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 2.4e-48 195.7 140 73.6
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 3.1e-48 195.3 135 71.9
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 1.3e-46 189.9 135 71.9
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 1.4e-45 186.4 131 73.3
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 1.4e-45 186.4 129 73.6
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 2.4e-45 185.7 131 73.3
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 2.4e-45 185.7 131 70.2
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 3.2e-45 185.3 138 68.1
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 9.3e-45 183.7 140 69.3
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.2e-44 183.3 138 69.6
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 2.1e-44 182.6 131 73.3
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 3.5e-44 181.8 129 69.8
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 3.5e-44 181.8 131 72.5
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 6.0e-44 181.0 103 81.6
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 7.9e-44 180.6 122 73.0
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.0e-43 180.3 137 68.6
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 1.8e-43 179.5 137 68.6
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 1.8e-43 179.5 137 68.6
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 1.8e-43 179.5 122 72.1
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.3e-43 179.1 137 68.6
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 3.0e-43 178.7 131 71.8
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 5.1e-43 177.9 139 71.9
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 6.7e-43 177.6 140 72.1
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 1.1e-42 176.8 122 71.3
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 1.1e-42 176.8 122 72.1
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 2.5e-42 175.6 134 69.4
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 9.6e-42 173.7 131 71.0
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 1.6e-41 172.9 138 66.7
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 2.8e-41 172.2 134 70.1
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 6.2e-41 171.0 112 78.6
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 8.1e-41 170.6 132 68.9
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 1.1e-40 170.2 122 72.1
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.4e-40 169.9 96 80.2
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 4.0e-40 168.3 95 84.2
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 9.0e-40 167.2 140 65.7
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.2e-39 166.8 128 69.5
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 2.0e-39 166.0 114 72.8
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 2.6e-39 165.6 122 68.9
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 4.5e-39 164.9 100 82.0
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 7.6e-39 164.1 124 65.3
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 7.6e-39 164.1 118 74.6
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 1.7e-38 162.9 122 70.5
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 3.8e-38 161.8 130 63.1
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 6.4e-38 161.0 115 72.2
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 8.4e-38 160.6 112 72.3
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 8.4e-38 160.6 132 66.7
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 2.4e-37 159.1 133 61.7
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.2e-37 158.7 115 72.2
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 3.2e-37 158.7 113 71.7
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 5.5e-37 157.9 129 63.6
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 5.5e-37 157.9 113 71.7
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 7.1e-37 157.5 133 61.7
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 7.1e-37 157.5 105 74.3
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 9.3e-37 157.1 136 61.0
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 9.3e-37 157.1 154 61.0
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 1.2e-36 156.8 131 63.4
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 2.7e-36 155.6 131 63.4
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 6.0e-36 154.5 128 60.9
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 7.9e-36 154.1 133 60.9
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 1.3e-35 153.3 139 57.6
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 2.3e-35 152.5 133 60.2
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 5.1e-35 151.4 131 61.1
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 6.7e-35 151.0 110 70.9
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 2.1e-33 146.0 96 71.9
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 8.2e-33 144.1 109 66.1
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.4e-32 143.3 96 72.9
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.4e-32 143.3 95 74.7
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 6.9e-32 141.0 137 59.1
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.5e-31 139.8 96 71.9
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 2.6e-31 139.0 98 64.3
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 3.4e-31 138.7 137 53.3
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 3.4e-31 138.7 119 63.0
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 4.5e-31 138.3 117 68.4
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 4.5e-31 138.3 123 60.2
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 1.0e-30 137.1 98 71.4
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 4.2e-29 131.7 105 58.1
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 9.3e-29 130.6 110 61.8
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 1.8e-27 126.3 95 65.3
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.3e-27 125.9 110 60.0
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 1.5e-26 123.2 92 60.9
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 2.5e-26 122.5 79 70.9
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 3.7e-25 118.6 83 67.5
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 1.8e-24 116.3 114 54.4
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 9.0e-24 114.0 63 81.0
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 9.0e-24 114.0 101 53.5
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 2.2e-22 109.4 93 65.6
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 8.5e-22 107.5 112 56.2
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 2.0e-15 86.3 43 88.4
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 7.7e-15 84.3 52 73.1
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 1.7e-14 83.2 68 70.6
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 5.5e-13 78.2 103 40.8
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 7.9e-12 74.3 97 40.2
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 9.7e-10 67.4 109 43.1


User provided reference genes

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