Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.1e-78 295.0 149 100.0
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.5e-72 273.9 147 92.5
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 4.8e-71 271.2 147 91.2
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.8e-70 269.2 147 90.5
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 4.1e-70 268.1 147 89.8
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 5.4e-70 267.7 147 89.8
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 5.4e-70 267.7 147 89.8
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 5.4e-70 267.7 147 89.8
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 9.1e-70 266.9 147 89.8
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 9.1e-70 266.9 147 89.1
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 1.6e-69 266.2 147 89.1
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.7e-69 265.4 147 89.8
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.7e-69 265.4 147 89.1
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.5e-69 265.0 147 88.4
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 3.5e-69 265.0 147 88.4
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 5.9e-69 264.2 147 89.1
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 5.9e-69 264.2 147 87.8
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.9e-69 264.2 147 87.8
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 7.7e-69 263.8 147 88.4
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 7.7e-69 263.8 147 88.4
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 7.7e-69 263.8 147 87.8
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.0e-68 263.5 147 88.4
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.0e-68 263.5 147 88.4
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.0e-68 263.5 147 88.4
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.0e-68 263.5 147 88.4
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 1.3e-68 263.1 147 88.4
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.3e-68 263.1 147 86.4
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.3e-68 263.1 147 87.8
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 2.9e-68 261.9 147 87.1
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.9e-68 261.9 147 88.4
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 3.8e-68 261.5 147 85.7
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 3.8e-68 261.5 147 88.4
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 3.8e-68 261.5 147 87.1
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 5.0e-68 261.2 147 87.1
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.0e-68 261.2 147 87.8
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 8.6e-68 260.4 147 86.4
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.5e-67 259.6 147 85.7
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 3.2e-67 258.5 147 87.1
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 4.2e-67 258.1 147 86.4
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 4.2e-67 258.1 147 85.7
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 4.2e-67 258.1 147 85.0
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 5.5e-67 257.7 147 86.4
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 5.5e-67 257.7 147 86.4
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 9.5e-67 256.9 147 85.7
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.6e-66 256.1 147 84.4
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 2.1e-66 255.8 147 84.4
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 2.1e-66 255.8 147 85.0
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 2.1e-66 255.8 147 85.0
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 6.1e-66 254.2 147 85.0
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.0e-65 253.4 147 83.7
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 1.0e-65 253.4 147 85.0
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.4e-65 253.1 147 83.0
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 2.3e-65 252.3 147 85.0
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 3.0e-65 251.9 147 83.7
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 3.0e-65 251.9 147 82.3
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 3.0e-65 251.9 147 85.0
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 4.0e-65 251.5 147 85.7
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 5.2e-65 251.1 147 83.0
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 5.2e-65 251.1 147 83.0
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 6.8e-65 250.8 147 82.3
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 6.8e-65 250.8 147 81.6
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 8.9e-65 250.4 147 82.3
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.5e-64 249.6 147 83.7
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.5e-64 249.6 147 78.2
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.5e-64 249.6 147 83.0
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 2.0e-64 249.2 147 84.4
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 2.0e-64 249.2 147 83.7
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 7.5e-64 247.3 147 81.6
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 9.8e-64 246.9 147 82.3
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 9.8e-64 246.9 147 81.6
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.3e-63 246.5 147 81.6
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.7e-63 246.1 147 81.6
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.8e-63 245.4 147 82.3
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 4.9e-63 244.6 147 82.3
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.9e-63 244.6 148 81.1
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 1.1e-62 243.4 147 81.0
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 1.1e-62 243.4 148 81.1
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 4.1e-62 241.5 147 80.3
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 5.4e-62 241.1 147 78.9
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 5.4e-62 241.1 147 79.6
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 5.4e-62 241.1 147 79.6
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.2e-61 240.0 147 78.9
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 1.6e-61 239.6 147 78.9
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 3.5e-61 238.4 147 79.6
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 5.9e-61 237.7 147 78.2
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 5.0e-60 234.6 147 76.9
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 6.6e-60 234.2 147 77.6
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.5e-59 233.0 147 76.9
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 2.5e-59 232.3 147 77.6
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 9.5e-59 230.3 147 78.9
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.2e-56 223.4 147 73.5
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 9.8e-56 220.3 149 74.5
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 1.3e-55 219.9 149 73.8
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.7e-55 219.5 147 71.4
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 2.2e-55 219.2 147 71.4
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 2.2e-55 219.2 147 71.4
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 2.2e-55 219.2 147 71.4
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 8.3e-55 217.2 147 70.7
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.0e-52 210.3 147 70.7
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 1.7e-52 209.5 147 72.1
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 5.0e-52 208.0 149 71.8
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.6e-48 195.7 147 67.3
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.2e-42 176.8 146 61.6
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.2e-42 176.8 146 61.6
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.4e-41 173.3 148 60.8
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.4e-41 173.3 148 60.8
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 2.3e-41 172.6 145 64.1
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.3e-39 166.8 96 84.4
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 9.2e-30 134.0 149 51.0
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 8.4e-23 110.9 149 45.0
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.7e-20 103.2 148 41.9
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 5.1e-20 101.7 146 45.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 2.1e-18 96.3 140 43.6
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.6e-13 80.1 95 50.5
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 3.7e-10 68.9 82 46.3
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 1.5e-08 63.5 140 32.1
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 9.9e-08 60.8 44 68.2


User provided reference genes

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