Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 3.6e-115 418.3 218 100.0
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 3.6e-91 338.6 216 78.7
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 1.5e-89 333.2 205 82.0
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 2.9e-88 328.9 217 77.4
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 3.7e-88 328.6 217 78.3
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 6.4e-88 327.8 216 76.9
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 8.3e-88 327.4 216 76.4
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.1e-87 327.0 216 78.7
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 1.1e-87 327.0 217 76.5
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 4.1e-87 325.1 217 76.5
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 1.2e-86 323.6 239 70.7
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 1.7e-85 319.7 217 76.5
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 2.3e-85 319.3 215 77.2
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 2.3e-85 319.3 216 76.9
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 8.6e-85 317.4 216 76.4
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 3.3e-84 315.5 216 73.6
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 4.3e-84 315.1 216 74.5
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 4.3e-84 315.1 206 76.2
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 5.6e-84 314.7 216 75.5
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 7.3e-84 314.3 224 72.8
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 7.3e-84 314.3 216 73.1
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 7.3e-84 314.3 222 74.3
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 2.1e-83 312.8 220 73.2
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 3.6e-83 312.0 216 72.7
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 3.6e-83 312.0 216 75.5
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 4.7e-83 311.6 215 73.5
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 6.2e-83 311.2 213 76.1
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 6.2e-83 311.2 214 74.8
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 6.2e-83 311.2 218 74.3
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 8.1e-83 310.8 216 72.7
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 1.4e-82 310.1 215 74.4
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 1.8e-82 309.7 216 74.1
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 1.8e-82 309.7 215 74.0
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 2.3e-82 309.3 220 73.2
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 3.1e-82 308.9 216 73.6
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 5.2e-82 308.1 219 73.5
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 6.8e-82 307.8 216 72.2
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 6.8e-82 307.8 220 74.5
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 8.9e-82 307.4 216 72.2
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 1.2e-81 307.0 216 72.7
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 1.2e-81 307.0 228 71.1
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 1.5e-81 306.6 244 68.4
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 2.0e-81 306.2 220 72.3
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 2.6e-81 305.8 220 70.5
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 9.9e-81 303.9 216 71.8
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 1.3e-80 303.5 216 72.7
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 2.2e-80 302.8 216 72.7
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 2.9e-80 302.4 220 72.7
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 3.2e-79 298.9 221 70.1
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 7.8e-78 294.3 216 70.4
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 1.7e-77 293.1 197 73.6
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 3.0e-77 292.4 200 75.0
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 2.1e-75 286.2 234 64.1
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 3.6e-75 285.4 216 68.5
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 4.7e-75 285.0 213 67.6
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 6.2e-75 284.6 214 71.0
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 1.1e-74 283.9 220 66.8
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 1.1e-74 283.9 213 67.6
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 2.4e-74 282.7 220 66.8
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 3.1e-74 282.3 183 77.6
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 4.0e-74 282.0 215 67.0
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 5.2e-74 281.6 214 67.3
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 6.9e-74 281.2 214 67.3
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 8.9e-74 280.8 215 67.9
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 1.2e-73 280.4 215 67.9
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 2.6e-73 279.3 167 81.4
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 5.8e-73 278.1 219 69.9
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 9.9e-73 277.3 216 66.2
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 1.7e-72 276.6 216 66.2
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 1.4e-71 273.5 219 65.8
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 4.2e-71 271.9 215 68.4
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 4.2e-71 271.9 216 68.1
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 5.4e-71 271.6 213 63.8
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 1.2e-70 270.4 205 67.8
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 4.6e-70 268.5 216 65.3
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 4.6e-70 268.5 167 80.2
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 2.1e-67 259.6 167 76.6
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 2.4e-66 256.1 167 77.2
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 9.9e-65 250.8 167 71.9
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 1.3e-64 250.4 170 71.8
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 3.8e-64 248.8 155 79.4
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 2.4e-63 246.1 193 65.3
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 5.1e-61 238.4 151 81.5
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 5.6e-60 235.0 215 58.1
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 6.2e-59 231.5 226 56.6
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 1.9e-55 219.9 219 52.5
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 3.0e-53 212.6 138 71.7
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 1.5e-52 210.3 141 70.9
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 1.0e-48 197.6 155 72.9
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 2.5e-47 193.0 215 52.1
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 1.3e-43 180.6 143 70.6
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 1.6e-43 180.3 143 69.9
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 6.9e-42 174.9 136 63.2
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.5e-28 130.6 95 74.7
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.1e-26 122.9 80 81.2
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.1e-26 122.9 80 81.2
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 8.5e-24 114.8 73 80.8
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 1.4e-21 107.5 185 38.4
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 1.7e-19 100.5 59 81.4
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 1.6e-17 94.0 77 66.2
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 4.5e-17 92.4 73 50.7
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 6.7e-13 78.6 187 34.8
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 3.3e-12 76.3 153 35.9
CDE04G2918 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 2.7e-06 56.6 43 58.1


User provided reference genes

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