Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 2.8e-85 318.5 159 100.0
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 3.2e-28 129.0 67 91.0
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 5.4e-28 128.3 67 89.6
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 3.5e-27 125.6 67 88.1
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 3.5e-27 125.6 67 86.6
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.0e-26 124.0 77 74.0
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.0e-26 124.0 77 74.0
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 1.0e-26 124.0 67 86.6
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 1.3e-26 123.6 67 86.6
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 2.3e-26 122.9 67 83.6
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 2.3e-26 122.9 67 86.6
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 3.0e-26 122.5 67 82.1
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.1e-26 121.7 77 74.0
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 5.1e-26 121.7 77 74.0
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 6.6e-26 121.3 67 85.1
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 8.6e-26 120.9 67 85.1
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 1.5e-25 120.2 67 80.6
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 1.5e-25 120.2 77 71.4
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 1.5e-25 120.2 67 83.6
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 2.5e-25 119.4 67 82.1
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 3.3e-25 119.0 67 83.6
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 4.3e-25 118.6 67 83.6
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.6e-25 118.2 67 83.6
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 7.3e-25 117.9 67 82.1
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 7.3e-25 117.9 67 83.6
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 7.3e-25 117.9 67 80.6
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 7.3e-25 117.9 67 79.1
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 3.6e-24 115.5 67 77.6
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 4.7e-24 115.2 67 79.1
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 4.7e-24 115.2 67 76.1
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 4.7e-24 115.2 67 74.6
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 4.7e-24 115.2 67 79.1
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 4.7e-24 115.2 67 77.6
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 4.7e-24 115.2 67 80.6
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 1.1e-23 114.0 67 76.1
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 1.1e-23 114.0 67 79.1
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 1.4e-23 113.6 67 77.6
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 1.4e-23 113.6 67 77.6
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 1.8e-23 113.2 67 77.6
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 1.8e-23 113.2 67 77.6
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 2.4e-23 112.8 67 77.6
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 2.4e-23 112.8 67 77.6
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 2.4e-23 112.8 67 74.6
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 2.4e-23 112.8 67 74.6
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 3.1e-23 112.5 67 76.1
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 5.2e-23 111.7 67 74.6
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 6.8e-23 111.3 67 73.1
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 6.8e-23 111.3 67 74.6
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 6.8e-23 111.3 67 73.1
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 6.8e-23 111.3 67 73.1
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 8.9e-23 110.9 67 74.6
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 8.9e-23 110.9 67 71.6
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 8.9e-23 110.9 67 76.1
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 1.2e-22 110.5 67 74.6
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.5e-22 110.2 67 74.6
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.5e-22 110.2 67 74.6
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.5e-22 110.2 67 74.6
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.5e-22 110.2 67 74.6
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 1.5e-22 110.2 67 76.1
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 2.0e-22 109.8 67 76.1
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.6e-22 109.4 67 73.1
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 3.4e-22 109.0 67 74.6
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 3.4e-22 109.0 67 76.1
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.4e-22 109.0 67 71.6
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 3.4e-22 109.0 67 70.1
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 4.4e-22 108.6 67 74.6
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 5.8e-22 108.2 87 63.2
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.9e-22 107.5 65 75.4
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.9e-22 107.5 65 75.4
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 9.9e-22 107.5 67 71.6
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.7e-21 106.7 77 66.2
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.7e-21 106.7 67 70.1
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 1.7e-21 106.7 67 73.1
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.2e-21 106.3 67 71.6
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 2.2e-21 106.3 77 64.9
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 2.9e-21 105.9 67 73.1
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 4.9e-21 105.1 67 70.1
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 4.9e-21 105.1 67 70.1
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 1.4e-20 103.6 66 72.7
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 1.4e-20 103.6 77 62.3
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 3.2e-20 102.4 67 71.6
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 3.2e-20 102.4 67 71.6
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 7.1e-20 101.3 93 50.5
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 9.3e-20 100.9 93 49.5
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 9.3e-20 100.9 77 55.8
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 9.3e-20 100.9 66 69.7
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 1.6e-19 100.1 67 65.7
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 1.6e-19 100.1 67 67.2
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 2.1e-19 99.8 67 65.7
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 2.1e-19 99.8 93 49.5
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 4.6e-19 98.6 93 48.4
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 4.6e-19 98.6 67 67.2
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 4.6e-19 98.6 67 62.7
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 6.0e-19 98.2 67 61.2
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 6.0e-19 98.2 67 61.2
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 6.0e-19 98.2 70 58.6
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 6.0e-19 98.2 67 61.2
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 6.0e-19 98.2 67 67.2
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 7.8e-19 97.8 67 64.2
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 7.8e-19 97.8 67 64.2
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 1.7e-18 96.7 66 60.6
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 1.7e-18 96.7 67 59.7
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 1.7e-18 96.7 66 60.6
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 1.7e-18 96.7 67 59.7
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 3.9e-18 95.5 67 59.7
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 8.7e-18 94.4 77 48.1
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.1e-17 94.0 67 58.2
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.1e-17 94.0 67 58.2
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 1.9e-17 93.2 93 46.2
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 2.5e-17 92.8 67 56.7
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 3.3e-17 92.4 67 64.2
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 3.3e-17 92.4 77 51.9
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 5.6e-17 91.7 67 65.7
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 2.8e-16 89.4 66 57.6
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 6.2e-16 88.2 68 54.4
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 2.4e-15 86.3 63 61.9
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 9.0e-15 84.3 77 50.6
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 3.8e-13 79.0 70 50.0
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 1.7e-10 70.1 68 44.1
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.9e-09 66.6 33 93.9
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 5.6e-09 65.1 44 61.4
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 2.8e-08 62.8 56 48.2
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 5.3e-07 58.5 32 68.8


User provided reference genes

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