Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0069 Trochodendron aralioides HOM05D004637 ORTHO05D005320 5.3e-190 667.5 338 100.0
TAR628G0193 Trochodendron aralioides HOM05D004637 ORTHO05D005320 1.4e-110 403.7 208 99.0
Dinv35927 Davidia involucrata HOM05D004637 ORTHO05D005320 2.0e-96 356.7 208 85.6
Dinv39271 Davidia involucrata HOM05D004637 ORTHO05D005320 4.4e-96 355.5 208 85.6
Nn5g30394 Nelumbo nucifera HOM05D004637 ORTHO05D005320 4.9e-95 352.1 204 86.3
CSS0035210 Camellia sinensis var. sinensis HOM05D004637 ORTHO05D005320 6.4e-95 351.7 204 86.3
Actinidia08272 Actinidia chinensis HOM05D004637 ORTHO05D005320 4.1e-94 349.0 208 83.7
TAR381G1093 Trochodendron aralioides HOM05D004637 ORTHO05D005320 7.1e-94 348.2 204 84.8
Aqoxy5G01163 Aquilegia oxysepala HOM05D004637 ORTHO05D005320 9.2e-94 347.8 206 85.0
PSO170G3952 Papaver somniferum HOM05D004637 ORTHO05D005320 1.3e-92 344.0 208 81.7
Lj4A64T29 Lonicera japonica HOM05D004637 ORTHO05D005320 1.7e-92 343.6 204 83.3
GSVIVG01009436001 Vitis vinifera HOM05D004637 ORTHO05D005320 1.7e-92 343.6 204 83.3
PSO210G5934 Papaver somniferum HOM05D004637 ORTHO05D005320 2.3e-92 343.2 208 81.2
Hma1.2p1_0360F.1_g135900 Hydrangea macrophylla HOM05D004637 ORTHO05D005320 6.6e-92 341.7 208 82.2
Sabra14G0016200 Salix brachista HOM05D004637 ORTHO05D005320 1.1e-91 340.9 204 82.8
Sed0017846 Sechium edule HOM05D004637 ORTHO05D005320 5.6e-91 338.6 209 78.0
Eucgr.F00183 Eucalyptus grandis HOM05D004637 ORTHO05D005320 1.2e-90 337.4 204 82.4
Potri.014G023800 Populus trichocarpa HOM05D004637 ORTHO05D005320 1.2e-90 337.4 208 80.8
MSTRG.25070 Avicennia marina HOM05D004637 ORTHO05D005320 1.6e-90 337.0 204 81.4
MELO3C010837.2 Cucumis melo HOM05D004637 ORTHO05D005320 1.6e-90 337.0 209 78.9
CsaV3_2G026470 Cucumis sativus L. HOM05D004637 ORTHO05D005320 1.6e-90 337.0 209 78.9
Oeu045704.1 Olea europaea HOM05D004637 ORTHO05D005320 1.6e-90 337.0 203 82.3
Thecc.08G001300 Theobroma cacao HOM05D004637 ORTHO05D005320 2.1e-90 336.7 208 80.3
QL02p003978 Quercus lobata HOM05D004637 ORTHO05D005320 4.7e-90 335.5 204 79.9
Gohir.A05G205600 Gossypium hirsutum HOM05D004637 ORTHO05D005320 6.2e-90 335.1 208 79.8
CiPaw.15G052200 Carya illinoinensis HOM05D004637 ORTHO05D005320 8.1e-90 334.7 201 82.6
Gohir.D05G208900 Gossypium hirsutum HOM05D004637 ORTHO05D005320 1.8e-89 333.6 208 79.8
Zm00001eb104960 Zea mays HOM05D004637 ORTHO05D005320 3.1e-89 332.8 205 79.5
Atru.chr13.748 Acer truncatum HOM05D004637 ORTHO05D005320 5.2e-89 332.0 204 80.4
Prupe.1G430800 Prunus persica HOM05D004637 ORTHO05D005320 5.2e-89 332.0 204 80.4
Migut.N02728 Erythranthe guttata HOM05D004637 ORTHO05D005320 6.9e-89 331.6 204 80.4
Manes.05G177100 Manihot esculenta HOM05D004637 ORTHO05D005320 1.5e-88 330.5 235 70.6
MD15G1077400 Malus domestica HOM05D004637 ORTHO05D005320 2.6e-88 329.7 204 78.4
Cc10_g04860 Coffea canephora HOM05D004637 ORTHO05D005320 3.4e-88 329.3 201 80.6
TWI36G0292 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 3.4e-88 329.3 204 78.9
MD08G1093700 Malus domestica HOM05D004637 ORTHO05D005320 9.9e-88 327.8 204 79.4
Gorai.009G215300 Gossypium raimondii HOM05D004637 ORTHO05D005320 1.3e-87 327.4 209 78.5
Glyma.17G238800 Glycine max HOM05D004637 ORTHO05D005320 2.9e-87 326.2 208 76.4
Cfa018057 Carpinus fangiana HOM05D004637 ORTHO05D005320 8.4e-87 324.7 210 78.6
Glyma.14G085900 Glycine max HOM05D004637 ORTHO05D005320 1.9e-86 323.6 208 75.5
Os07g0479200 Oryza sativa ssp. japonica HOM05D004637 ORTHO05D005320 4.2e-86 322.4 204 77.5
CANSAT54G2334 Cannabis sativa HOM05D004637 ORTHO05D005320 7.1e-86 321.6 204 77.0
TPR.G3787 Trifolium pratense HOM05D004637 ORTHO05D005320 9.3e-86 321.2 209 75.6
CAN.G1194.20 Capsicum annuum HOM05D004637 ORTHO05D005320 2.1e-85 320.1 198 78.3
Psat6g015000 Pisum sativum HOM05D004637 ORTHO05D005320 2.1e-85 320.1 204 77.5
PGR031G3707 Punica granatum HOM05D004637 ORTHO05D005320 7.8e-85 318.2 202 78.7
ClCG08G016150 Citrullus lanatus HOM05D004637 ORTHO05D005320 1.0e-84 317.8 209 76.6
Sopen12g030560 Solanum pennellii HOM05D004637 ORTHO05D005320 1.0e-84 317.8 198 78.3
PGSC0003DMG400015434 Solanum tuberosum HOM05D004637 ORTHO05D005320 1.0e-84 317.8 198 78.8
TWI56G1297 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 1.3e-84 317.4 204 77.0
Lj5g0011390 Lotus japonicus HOM05D004637 ORTHO05D005320 2.3e-84 316.6 208 76.4
FvH4_2g33730 Fragaria vesca HOM05D004637 ORTHO05D005320 3.0e-84 316.2 208 74.5
Lsat_1_v5_gn_1_22460 Lactuca sativa HOM05D004637 ORTHO05D005320 5.1e-84 315.5 204 76.5
VMungo0647G2267 Vigna mungo HOM05D004637 ORTHO05D005320 5.1e-84 315.5 203 76.4
CiPaw.16G038000 Carya illinoinensis HOM05D004637 ORTHO05D005320 6.6e-84 315.1 199 77.9
THA.LOC104824981 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 6.6e-84 315.1 201 76.1
HanXRQChr10g0309661 Helianthus annuus HOM05D004637 ORTHO05D005320 8.7e-84 314.7 204 77.0
Medtr1g018800 Medicago truncatula HOM05D004637 ORTHO05D005320 8.7e-84 314.7 206 75.7
Solyc12g088660.2 Solanum lycopersicum HOM05D004637 ORTHO05D005320 8.7e-84 314.7 198 77.3
Phvul.001G024600 Phaseolus vulgaris HOM05D004637 ORTHO05D005320 4.3e-83 312.4 208 75.0
HPP92_003482 Vanilla planifolia HOM05D004637 ORTHO05D005320 7.3e-83 311.6 208 70.7
AL6G41290 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 9.6e-83 311.2 208 72.6
Carub.0006s2649 Capsella rubella HOM05D004637 ORTHO05D005320 9.6e-83 311.2 208 72.1
AT4G07390 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 1.3e-82 310.8 208 72.6
FAN15G1438 Fragaria x ananassa HOM05D004637 ORTHO05D005320 1.3e-82 310.8 226 69.9
THA.LOC104825764 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 1.3e-82 310.8 208 72.1
unitig_26.g9809 Utricularia gibba HOM05D004637 ORTHO05D005320 2.1e-82 310.1 204 75.0
RcHm_v2.0_Chr6g0308821 Rosa chinensis HOM05D004637 ORTHO05D005320 8.1e-82 308.1 208 74.0
A03p27890 Brassica napus HOM05D004637 ORTHO05D005320 1.8e-81 307.0 208 72.1
BraA03t12001Z Brassica rapa HOM05D004637 ORTHO05D005320 1.8e-81 307.0 208 72.1
FAN27G2280 Fragaria x ananassa HOM05D004637 ORTHO05D005320 1.8e-81 307.0 233 67.8
C03p33670 Brassica napus HOM05D004637 ORTHO05D005320 4.0e-81 305.8 208 72.1
BolC3t15687H Brassica oleracea HOM05D004637 ORTHO05D005320 4.0e-81 305.8 208 72.1
BcaB01g02883 Brassica carinata HOM05D004637 ORTHO05D005320 5.3e-81 305.4 208 72.1
Thhalv10028929m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 1.5e-80 303.9 208 70.7
CDE01G0812 Ceratophyllum demersum HOM05D004637 ORTHO05D005320 2.0e-80 303.5 200 75.5
CARHR288440 Cardamine hirsuta HOM05D004637 ORTHO05D005320 3.4e-80 302.8 208 70.2
Ah.08g212480 Amaranthus hybridus HOM05D004637 ORTHO05D005320 7.6e-80 301.6 228 66.7
Aa31LG8G3140 Aethionema arabicum HOM05D004637 ORTHO05D005320 1.3e-79 300.8 208 70.2
Sp6g10610 Schrenkiella parvula HOM05D004637 ORTHO05D005320 1.3e-79 300.8 208 71.2
Eucgr.F02306 Eucalyptus grandis HOM05D004637 ORTHO05D005320 2.2e-79 300.1 204 72.5
PGR083G2827 Punica granatum HOM05D004637 ORTHO05D005320 8.4e-79 298.1 196 75.0
Actinidia38079 Actinidia chinensis HOM05D004637 ORTHO05D005320 3.2e-78 296.2 177 84.2
Rhsim07G0225500 Rhododendron simsii HOM05D004637 ORTHO05D005320 4.2e-78 295.8 231 68.0
Thhalv10015267m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 9.3e-78 294.7 234 64.1
Sc02g0007520 Simmondsia chinensis HOM05D004637 ORTHO05D005320 1.2e-77 294.3 187 77.5
AL8G35940 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 4.6e-77 292.4 209 68.9
RcHm_v2.0_Chr0c32g0501551 Rosa chinensis HOM05D004637 ORTHO05D005320 3.0e-76 289.7 187 75.4
SEGI_04928 Sequoiadendron giganteum HOM05D004637 ORTHO05D005320 3.0e-76 289.7 203 69.0
Ciclev10002344m.g Citrus clementina HOM05D004637 ORTHO05D005320 5.1e-76 288.9 204 68.1
EL10As7g23788 Beta vulgaris HOM05D004637 ORTHO05D005320 1.1e-75 287.7 244 61.5
BcaC01g04795 Brassica carinata HOM05D004637 ORTHO05D005320 3.3e-75 286.2 201 70.1
Nitab4.5_0006486g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 3.3e-75 286.2 208 70.2
arahy.Tifrunner.gnm1.ann1.RG91LC Arachis hypogaea HOM05D004637 ORTHO05D005320 7.4e-75 285.0 194 73.7
arahy.Tifrunner.gnm1.ann1.UI0UDP Arachis hypogaea HOM05D004637 ORTHO05D005320 7.4e-75 285.0 194 73.7
Carub.0008s2014 Capsella rubella HOM05D004637 ORTHO05D005320 1.3e-74 284.3 209 65.6
CARHR285840 Cardamine hirsuta HOM05D004637 ORTHO05D005320 3.1e-73 279.6 209 66.0
Duzib093G0653 Durio zibethinus HOM05D004637 ORTHO05D005320 1.2e-72 277.7 208 69.2
Oeu037612.1 Olea europaea HOM05D004637 ORTHO05D005320 2.0e-72 276.9 166 82.5
Nitab4.5_0006004g0010 Nicotiana tabacum HOM05D004637 ORTHO05D005320 2.6e-72 276.6 198 70.7
Manes.18G041200 Manihot esculenta HOM05D004637 ORTHO05D005320 8.4e-71 271.6 167 80.2
BraA02t05792Z Brassica rapa HOM05D004637 ORTHO05D005320 3.2e-70 269.6 209 63.2
A02p07110 Brassica napus HOM05D004637 ORTHO05D005320 4.2e-70 269.2 209 63.2
BcaB05g22509 Brassica carinata HOM05D004637 ORTHO05D005320 1.6e-69 267.3 209 62.7
BcaC03g14011 Brassica carinata HOM05D004637 ORTHO05D005320 2.7e-69 266.5 209 61.7
BolC2t07347H Brassica oleracea HOM05D004637 ORTHO05D005320 2.7e-69 266.5 209 61.7
C02p12470 Brassica napus HOM05D004637 ORTHO05D005320 6.0e-69 265.4 209 61.2
ECA247G2514 Erigeron canadensis HOM05D004637 ORTHO05D005320 1.8e-68 263.8 174 74.7
FAN20G0860 Fragaria x ananassa HOM05D004637 ORTHO05D005320 2.3e-68 263.5 238 60.1
SMO365G0080 Selaginella moellendorffii HOM05D004637 ORTHO05D005320 5.6e-67 258.8 208 61.1
BolC3t13818H Brassica oleracea HOM05D004637 ORTHO05D005320 1.3e-66 257.7 204 61.3
Haze_18072 Corylus avellana HOM05D004637 ORTHO05D005320 2.8e-66 256.5 167 77.8
Mapoly0040s0013 Marchantia polymorpha HOM05D004637 ORTHO05D005320 1.2e-64 251.1 203 60.1
FAN24G1748 Fragaria x ananassa HOM05D004637 ORTHO05D005320 3.4e-64 249.6 209 64.1
vmacro21608 Vaccinium macrocarpon HOM05D004637 ORTHO05D005320 1.3e-63 247.7 151 82.8
Pp3c3_8350 Physcomitrium patens HOM05D004637 ORTHO05D005320 4.9e-63 245.7 208 58.7
Peaxi162Scf01087g00125 Petunia axillaris HOM05D004637 ORTHO05D005320 1.2e-61 241.1 156 77.6
Pp3c4_22670 Physcomitrium patens HOM05D004637 ORTHO05D005320 1.2e-61 241.1 204 58.3
HPP92_026880 Vanilla planifolia HOM05D004637 ORTHO05D005320 2.1e-61 240.4 159 71.7
Nitab4.5_0004339g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 1.3e-60 237.7 176 69.3
Peaxi162Scf00160g00034 Petunia axillaris HOM05D004637 ORTHO05D005320 5.7e-59 232.3 144 78.5
CBR_g40794 Chara braunii HOM05D004637 ORTHO05D005320 6.9e-57 225.3 198 57.6
Nitab4.5_0010118g0060 Nicotiana tabacum HOM05D004637 ORTHO05D005320 5.9e-56 222.2 200 60.5
CBR_g8228 Chara braunii HOM05D004637 ORTHO05D005320 7.2e-54 215.3 195 56.9
AagrBONN_evm.TU.Sc2ySwM_344.2883 Anthoceros agrestis HOM05D004637 ORTHO05D005320 6.1e-53 212.2 167 59.9
SalBow7G4009 Salvia bowleyana HOM05D004637 ORTHO05D005320 7.7e-48 195.3 126 78.6
Sp6g21160 Schrenkiella parvula HOM05D004637 ORTHO05D005320 1.9e-46 190.7 135 71.1
AT5G59470 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 1.8e-44 184.1 135 67.4
Cpa.g.sc21.155 Carica papaya HOM05D004637 ORTHO05D005320 2.8e-42 176.8 104 84.6
Lalb_Chr22g0354931 Lupinus albus HOM05D004637 ORTHO05D005320 3.8e-39 166.4 109 73.4
Hund04212 Selenicereus undatus HOM05D004637 ORTHO05D005320 8.5e-39 165.2 139 64.7
AUR62002897 Chenopodium quinoa HOM05D004637 ORTHO05D005320 1.4e-38 164.5 106 74.5
AUR62035253 Chenopodium quinoa HOM05D004637 ORTHO05D005320 1.4e-38 164.5 106 74.5
BcaC01g04787 Brassica carinata HOM05D004637 ORTHO05D005320 1.2e-37 161.4 100 78.0
QL07p047618 Quercus lobata HOM05D004637 ORTHO05D005320 6.1e-37 159.1 102 76.5
Lalb_Chr22g0354941 Lupinus albus HOM05D004637 ORTHO05D005320 2.3e-36 157.1 111 74.8
SGA_v2.0_scaffold588G53062 Striga asiatica HOM05D004637 ORTHO05D005320 5.7e-35 152.5 269 39.0
SGA_v2.0_scaffold137G35065 Striga asiatica HOM05D004637 ORTHO05D005320 1.5e-30 137.9 83 73.5
PRCOL_00005305 Prasinoderma coloniale HOM05D004637 ORTHO05D005320 2.1e-29 134.0 183 38.3
BcaB01g04583 Brassica carinata HOM05D004637 ORTHO05D005320 1.3e-23 114.8 117 50.4
Cre17.g722500 Chlamydomonas reinhardtii HOM05D004637 ORTHO05D005320 1.7e-23 114.4 181 36.5
QL11p041834 Quercus lobata HOM05D001716 ORTHO05D004234 7.2e-22 109.0 98 60.2
MCO13G491 Micromonas commoda HOM05D004637 ORTHO05D005320 5.2e-20 102.8 203 33.5
MCO13G508 Micromonas commoda HOM05D004637 ORTHO05D005320 5.2e-20 102.8 203 33.5
Cc02_g27600 Coffea canephora HOM05D004637 ORTHO05D005320 3.7e-18 96.7 74 60.8
Cre06.g261300 Chlamydomonas reinhardtii HOM05D004637 ORTHO05D005320 5.4e-17 92.8 170 32.4
RcHm_v2.0_Chr1g0356881 Rosa chinensis HOM05D004637 ORTHO05D005320 7.7e-16 89.0 51 84.3
COL.COLO4_10117 Corchorus olitorius HOM05D004637 ORTHO05D005320 2.5e-14 84.0 49 79.6
Peaxi162Scf00160g00035 Petunia axillaris HOM05D004637 ORTHO05D005320 6.1e-13 79.3 50 74.0
Ca_13257_v3 Cicer arietinum L. HOM05D004637 ORTHO05D005320 4.0e-12 76.6 48 68.8
BcaC01g06520 Brassica carinata HOM05D004637 ORTHO05D005320 3.7e-10 70.1 47 68.1
HPP92_014526 Vanilla planifolia HOM05D004637 ORTHO05D005320 3.5e-08 63.5 44 65.9
BcaB02g11171 Brassica carinata HOM05D037786 ORTHO05D091371 7.8e-08 62.4 50 52.0
Peaxi162Scf00160g00024 Petunia axillaris HOM05D004637 ORTHO05D005320 5.0e-07 59.7 33 84.8
Pp3c10_370 Physcomitrium patens HOM05D004637 ORTHO05D005320 8.6e-07 58.9 55 54.5


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