Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0054 Trochodendron aralioides HOM05D003739 ORTHO05D003996 0.0e+00 1511.1 833 100.0
Nn4g24182 Nelumbo nucifera HOM05D003739 ORTHO05D003996 1.9e-164 583.9 869 48.4
GSVIVG01023816001 Vitis vinifera HOM05D003739 ORTHO05D003996 1.7e-149 534.3 857 44.8
CSS0038123 Camellia sinensis var. sinensis HOM05D003739 ORTHO05D003996 1.6e-134 484.6 846 43.1
QL11p044151 Quercus lobata HOM05D003739 ORTHO05D003996 9.2e-127 458.8 857 42.9
TAR376G0790 Trochodendron aralioides HOM05D003739 ORTHO05D003996 3.0e-122 443.7 392 67.1
Cfa005045 Carpinus fangiana HOM05D003739 ORTHO05D003996 4.3e-116 423.3 847 40.4
PSO339G5323 Papaver somniferum HOM05D003739 ORTHO05D003996 8.9e-114 415.6 862 39.8
CiPaw.06G133400 Carya illinoinensis HOM05D003739 ORTHO05D003996 3.4e-113 413.7 864 39.5
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 1.3e-112 411.8 886 38.4
Aqoxy2G03991 Aquilegia oxysepala HOM05D003739 ORTHO05D003996 4.9e-112 409.8 847 39.8
CiPaw.10G121500 Carya illinoinensis HOM05D003739 ORTHO05D003996 1.7e-104 384.8 842 38.8
Ciclev10027900m.g Citrus clementina HOM05D003739 ORTHO05D003996 6.0e-94 349.7 694 40.1
Actinidia35828 Actinidia chinensis HOM05D003739 ORTHO05D003996 2.1e-91 341.3 886 36.8
MBI16_g35489_MAGBIO Magnolia biondii HOM05D033968 ORTHO05D003996 6.2e-91 339.7 774 37.7
Manes.11G084700 Manihot esculenta HOM05D003739 ORTHO05D003996 2.1e-86 324.7 802 35.4
CANSAT54G2857 Cannabis sativa HOM05D003739 ORTHO05D003996 6.6e-85 319.7 729 38.8
Duzib187G1144 Durio zibethinus HOM05D003739 ORTHO05D003996 5.6e-84 316.6 842 36.2
PSO675G5166 Papaver somniferum HOM05D003739 ORTHO05D003996 5.6e-84 316.6 753 37.6
Oeu005537.3 Olea europaea HOM05D003739 ORTHO05D003996 8.1e-83 312.8 853 35.3
Cc09_g05210 Coffea canephora HOM05D003739 ORTHO05D003996 1.5e-81 308.5 862 35.6
Prupe.8G091800 Prunus persica HOM05D003739 ORTHO05D003996 2.0e-81 308.1 844 36.6
MSTRG.9105 Avicennia marina HOM05D003739 ORTHO05D003996 2.6e-81 307.8 860 34.9
Gohir.D09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 1.1e-76 292.4 820 33.2
Gorai.006G107300 Gossypium raimondii HOM05D003739 ORTHO05D003996 2.5e-76 291.2 820 33.3
Dinv05658 Davidia involucrata HOM05D003739 ORTHO05D003996 9.6e-76 289.3 697 37.2
PGR042G2822 Punica granatum HOM05D003739 ORTHO05D003996 2.1e-75 288.1 872 32.5
MD10G1070200 Malus domestica HOM05D003739 ORTHO05D003996 3.7e-75 287.3 835 34.9
TWI79G1707 Tripterygium wilfordii HOM05D003739 ORTHO05D003996 2.6e-73 281.2 840 33.5
PSO063G1830 Papaver somniferum HOM05D003739 ORTHO05D003996 1.3e-72 278.9 452 45.1
Dinv13445 Davidia involucrata HOM05D003739 ORTHO05D003996 1.4e-71 275.4 753 35.3
RcHm_v2.0_Chr6g0265811 Rosa chinensis HOM05D003739 ORTHO05D003996 1.9e-71 275.0 815 33.5
ClCG01G008230 Citrullus lanatus HOM05D003739 ORTHO05D003996 2.4e-71 274.6 860 34.0
Thecc.08G060300 Theobroma cacao HOM05D003739 ORTHO05D003996 5.5e-71 273.5 837 33.3
CANSAT11G0250 Cannabis sativa HOM05D003739 ORTHO05D003996 9.3e-71 272.7 681 37.3
PSO541G6540 Papaver somniferum HOM05D003739 ORTHO05D003996 1.6e-70 271.9 398 48.0
vmacro15435 Vaccinium macrocarpon HOM05D003739 ORTHO05D003996 4.6e-70 270.4 913 31.5
Sed0001527 Sechium edule HOM05D003739 ORTHO05D003996 1.0e-69 269.2 842 34.1
Peaxi162Scf00048g01417 Petunia axillaris HOM05D003739 ORTHO05D003996 1.3e-69 268.9 853 33.3
Atru.chr12.1298 Acer truncatum HOM05D003739 ORTHO05D003996 3.0e-69 267.7 674 36.9
CsaV3_5G020720 Cucumis sativus L. HOM05D003739 ORTHO05D003996 5.1e-69 266.9 863 32.1
RcHm_v2.0_Chr5g0054461 Rosa chinensis HOM05D003739 ORTHO05D003996 1.5e-68 265.4 667 36.0
Sopen02g026250 Solanum pennellii HOM05D003739 ORTHO05D003996 1.5e-68 265.4 847 32.9
Nitab4.5_0010401g0020 Nicotiana tabacum HOM05D003739 ORTHO05D003996 1.6e-67 261.9 676 35.7
COL.COLO4_32233 Corchorus olitorius HOM05D003739 ORTHO05D003996 1.2e-65 255.8 853 30.7
PGSC0003DMG402017733 Solanum tuberosum HOM05D003739 ORTHO05D003996 1.4e-63 248.8 732 34.0
Gohir.A09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 9.3e-63 246.1 821 30.6
CAN.G809.70 Capsicum annuum HOM05D003739 ORTHO05D003996 1.6e-62 245.4 569 39.0
Lj8C306T17 Lonicera japonica HOM05D003739 ORTHO05D003996 6.0e-62 243.4 755 33.5
Potri.010G019600 Populus trichocarpa HOM05D003739 ORTHO05D003996 3.3e-60 237.7 424 42.9
Glyma.01G228200 Glycine max HOM05D003739 ORTHO05D003996 4.3e-60 237.3 854 32.1
FvH4_2g09520 Fragaria vesca HOM05D003739 ORTHO05D003996 9.7e-60 236.1 753 33.5
Nitab4.5_0006794g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 3.7e-59 234.2 710 32.4
FAN27G2905 Fragaria x ananassa HOM05D003739 ORTHO05D003996 4.1e-58 230.7 755 33.1
FAN24G2517 Fragaria x ananassa HOM05D003739 ORTHO05D003996 5.3e-58 230.3 756 33.3
Atru.chr5.3065 Acer truncatum HOM05D003739 ORTHO05D003996 9.0e-58 229.6 312 50.0
Cpa.g.sc14.123 Carica papaya HOM05D003739 ORTHO05D003996 1.5e-57 228.8 681 35.1
FAN15G1163 Fragaria x ananassa HOM05D003739 ORTHO05D003996 3.4e-57 227.6 753 33.5
arahy.Tifrunner.gnm1.ann1.H3NIN5 Arachis hypogaea HOM05D003739 ORTHO05D003996 1.4e-55 222.2 424 39.2
AUR62028080 Chenopodium quinoa HOM05D003739 ORTHO05D003996 1.4e-55 222.2 639 35.8
CDE06G1699 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 1.9e-55 221.9 891 31.6
Glyma.11G010900 Glycine max HOM05D003739 ORTHO05D003996 1.9e-55 221.9 858 29.4
Lalb_Chr11g0068001 Lupinus albus HOM05D003739 ORTHO05D003996 3.2e-55 221.1 489 38.9
Sabra10G0016300 Salix brachista HOM05D003739 ORTHO05D003996 1.4e-53 215.7 384 44.8
Sed0009728 Sechium edule HOM05D003739 ORTHO05D003996 1.4e-53 215.7 353 43.9
Nitab4.5_0004903g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 2.5e-52 211.5 862 27.8
SGA_v2.0_scaffold62G21539 Striga asiatica HOM05D003739 ORTHO05D003996 9.7e-52 209.5 670 34.2
ECA234G4722 Erigeron canadensis HOM05D003739 ORTHO05D003996 1.3e-51 209.1 378 41.3
LjContig00222g0016564 Lotus japonicus HOM05D003739 ORTHO05D003996 8.2e-51 206.5 368 42.1
AUR62005990 Chenopodium quinoa HOM05D003739 ORTHO05D003996 2.2e-48 198.4 554 36.8
Migut.F00900 Erythranthe guttata HOM05D003739 ORTHO05D003996 5.0e-48 197.2 567 33.5
Phvul.002G039700 Phaseolus vulgaris HOM05D003739 ORTHO05D003996 8.5e-48 196.4 842 29.3
Eucgr.A01623 Eucalyptus grandis HOM05D003739 ORTHO05D003996 1.4e-47 195.7 852 31.6
arahy.Tifrunner.gnm1.ann1.TF9NF6 Arachis hypogaea HOM05D003739 ORTHO05D003996 3.2e-47 194.5 434 36.6
Lsat_1_v5_gn_5_112881 Lactuca sativa HOM05D003739 ORTHO05D003996 1.2e-46 192.6 676 31.8
FvH4_2g03400 Fragaria vesca HOM05D003739 ORTHO05D003996 6.1e-46 190.3 546 34.4
Actinidia20856 Actinidia chinensis HOM05D003739 ORTHO05D003996 1.8e-45 188.7 530 35.3
Psat7g051640 Pisum sativum HOM05D003739 ORTHO05D003996 1.5e-44 185.7 271 45.4
Hund09717 Selenicereus undatus HOM05D003739 ORTHO05D003996 1.5e-44 185.7 312 42.3
TPR.G2246 Trifolium pratense HOM05D003739 ORTHO05D003996 4.4e-44 184.1 869 28.3
Dinv05659 Davidia involucrata HOM05D003739 ORTHO05D003996 5.7e-44 183.7 165 65.5
FAN24G0708 Fragaria x ananassa HOM05D003739 ORTHO05D003996 7.4e-44 183.3 543 33.5
ATR0564G411 Amborella trichopoda HOM05D003739 ORTHO05D003996 2.8e-43 181.4 291 43.6
DCAR_004344 Daucus carota HOM05D003739 ORTHO05D003996 1.5e-41 175.6 702 30.3
RcHm_v2.0_Chr6g0265821 Rosa chinensis HOM05D003739 ORTHO05D003996 7.7e-41 173.3 689 31.3
VMungo1215G1752 Vigna mungo HOM05D003739 ORTHO05D003996 7.7e-41 173.3 858 28.7
EL10Ac3g05170 Beta vulgaris HOM05D003739 ORTHO05D003996 3.2e-39 167.9 556 33.8
unitig_46.g18632 Utricularia gibba HOM05D003739 ORTHO05D003996 7.2e-39 166.8 234 45.7
Dinv07186 Davidia involucrata HOM05D000053 ORTHO05D045112 9.4e-39 166.4 445 35.3
SalBow6G4317 Salvia bowleyana HOM05D003739 ORTHO05D003996 2.7e-38 164.9 476 31.3
HPP92_028201 Vanilla planifolia HOM05D003739 ORTHO05D003996 1.4e-37 162.5 268 44.8
Hma1.2p1_1073F.1_g254250 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 5.2e-37 160.6 152 57.2
HanXRQChr10g0289001 Helianthus annuus HOM05D003739 ORTHO05D003996 9.7e-36 156.4 295 40.0
FAN27G3438 Fragaria x ananassa HOM05D003739 ORTHO05D003996 1.7e-35 155.6 551 32.1
Hund09716 Selenicereus undatus HOM05D003739 ORTHO05D003996 2.8e-35 154.8 655 29.5
Ca_17694_v3 Cicer arietinum L. HOM05D003739 ORTHO05D003996 1.1e-34 152.9 668 30.5
Medtr8g091830 Medicago truncatula HOM05D003739 ORTHO05D003996 1.4e-34 152.5 709 30.5
AT4G39160 Arabidopsis thaliana HOM05D003739 ORTHO05D003996 1.8e-34 152.1 277 40.8
Aa31LG6G16100 Aethionema arabicum HOM05D003739 ORTHO05D003996 2.4e-34 151.8 279 38.4
Lj6g0022884 Lotus japonicus HOM05D003739 ORTHO05D003996 2.4e-34 151.8 793 27.7
AL7G11100 Arabidopsis lyrata HOM05D003739 ORTHO05D003996 2.6e-33 148.3 317 39.1
A08p23790 Brassica napus HOM05D003739 ORTHO05D003996 1.0e-32 146.4 279 38.4
C03p77640 Brassica napus HOM05D003739 ORTHO05D003996 1.1e-31 142.9 284 39.1
BolC3t20021H Brassica oleracea HOM05D003739 ORTHO05D003996 1.1e-31 142.9 284 39.1
SEGI_13436 Sequoiadendron giganteum HOM05D003739 ORTHO05D003996 1.5e-31 142.5 145 54.5
BraA08t34331Z Brassica rapa HOM05D003739 ORTHO05D003996 3.2e-31 141.4 278 37.4
Thhalv10024751m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 1.2e-30 139.4 267 37.5
Sp3g07810 Schrenkiella parvula HOM05D003739 ORTHO05D000043 2.1e-30 138.7 362 34.3
THA.LOC104800691 Tarenaya hassleriana HOM05D003739 ORTHO05D003996 2.7e-30 138.3 318 35.8
Psat7g051160 Pisum sativum HOM05D003739 ORTHO05D003996 3.6e-30 137.9 666 30.2
Medtr4g067250 Medicago truncatula HOM05D003739 ORTHO05D003996 5.2e-29 134.0 256 34.4
BcaNung03888 Brassica carinata HOM05D003739 ORTHO05D003996 8.8e-29 133.3 312 37.2
CARHR247590 Cardamine hirsuta HOM05D003739 ORTHO05D003996 1.5e-28 132.5 284 36.3
BcaB03g12246 Brassica carinata HOM05D003739 ORTHO05D003996 2.0e-28 132.1 267 36.7
TPR.G2191 Trifolium pratense HOM05D003739 ORTHO05D003996 4.8e-27 127.5 221 42.1
FvH4_2g03360 Fragaria vesca HOM05D003739 ORTHO05D003996 8.3e-27 126.7 542 28.8
Aa31LG7G15010 Aethionema arabicum HOM05D003739 ORTHO05D003996 1.4e-26 125.9 372 32.3
BcaC01g00285 Brassica carinata HOM05D000394 ORTHO05D000299 1.8e-26 125.6 266 35.7
FvH4_2g09510 Fragaria vesca HOM05D003739 ORTHO05D003996 1.8e-26 125.6 751 27.4
MELO3C005063.2 Cucumis melo HOM05D003739 ORTHO05D003996 3.1e-26 124.8 398 32.4
Medtr8g091850 Medicago truncatula HOM05D003739 ORTHO05D003996 5.9e-25 120.6 190 44.2
Zm00001eb261130 Zea mays HOM05D025681 ORTHO05D003996 1.7e-24 119.0 240 37.5
C09p07090 Brassica napus HOM05D003739 ORTHO05D003996 5.0e-24 117.5 265 34.3
BolC7t46745H Brassica oleracea HOM05D003739 ORTHO05D003996 5.0e-24 117.5 560 28.2
CARHR106820 Cardamine hirsuta HOM05D003739 ORTHO05D003996 6.5e-24 117.1 272 35.3
BcaNung02353 Brassica carinata HOM05D003739 ORTHO05D003996 8.5e-24 116.7 218 38.5
BolC9t53626H Brassica oleracea HOM05D003739 ORTHO05D003996 1.9e-23 115.5 279 32.6
Carub.0007s0104 Capsella rubella HOM05D003739 ORTHO05D003996 4.2e-23 114.4 309 32.0
A09p06800 Brassica napus HOM05D003739 ORTHO05D003996 1.0e-21 109.8 266 33.8
AagrBONN_evm.TU.Sc2ySwM_368.1462 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-21 108.2 185 36.8
TAR376G1132 Trochodendron aralioides HOM05D003739 ORTHO05D003996 3.0e-21 108.2 90 63.3
BraA09t36326Z Brassica rapa HOM05D003739 ORTHO05D003996 6.8e-21 107.1 264 33.3
Zm00001eb249730 Zea mays HOM05D025681 ORTHO05D003996 1.2e-20 106.3 155 41.3
BraA06t27734Z Brassica rapa HOM05D003739 ORTHO05D003996 4.4e-20 104.4 576 28.1
AagrBONN_evm.TU.Sc2ySwM_340.755 Anthoceros agrestis HOM05D003739 ORTHO05D003996 7.5e-20 103.6 149 43.6
AagrBONN_evm.TU.Sc2ySwM_344.3723 Anthoceros agrestis HOM05D003739 ORTHO05D003996 7.5e-20 103.6 149 43.6
BcaC04g23559 Brassica carinata HOM05D003739 ORTHO05D003996 1.7e-19 102.4 417 28.1
AagrBONN_evm.TU.Sc2ySwM_344.4525 Anthoceros agrestis HOM05D003739 ORTHO05D003996 1.1e-18 99.8 266 32.7
A06p48670 Brassica napus HOM05D003739 ORTHO05D003996 2.4e-18 98.6 573 28.1
Pp3c18_8710 Physcomitrium patens HOM05D003739 ORTHO05D003996 4.1e-18 97.8 323 31.0
Pp3c21_11880 Physcomitrium patens HOM05D003739 ORTHO05D003996 7.0e-18 97.1 136 42.6
MBI16_g47782_MAGBIO Magnolia biondii HOM05D033968 ORTHO05D003996 4.5e-17 94.4 255 34.1
FAN15G1290 Fragaria x ananassa HOM05D003739 ORTHO05D003996 7.7e-17 93.6 162 38.3
CARHR112440 Cardamine hirsuta HOM05D003739 ORTHO05D003996 1.3e-16 92.8 60 70.0
C07p63340 Brassica napus HOM05D003739 ORTHO05D003996 1.7e-16 92.4 548 26.8
Glyma.10G205233 Glycine max HOM05D003739 ORTHO05D003996 1.7e-16 92.4 203 35.0
Mapoly0023s0090 Marchantia polymorpha HOM05D003739 ORTHO05D003996 6.6e-16 90.5 503 25.4
Glyma.20G185167 Glycine max HOM05D003739 ORTHO05D003996 1.1e-15 89.7 145 37.9
CBR_g31667 Chara braunii HOM05D003739 ORTHO05D003996 9.5e-15 86.7 116 38.8
Atru.chr12.1559 Acer truncatum HOM05D003739 ORTHO05D003996 1.6e-14 85.9 87 62.1
Manes.04G075172 Manihot esculenta HOM05D003739 ORTHO05D003996 5.2e-13 80.9 89 48.3
Actinidia05492 Actinidia chinensis HOM05D003739 ORTHO05D003996 1.2e-12 79.7 96 60.4
MCO01G601 Micromonas commoda HOM05D003739 ORTHO05D003996 1.5e-12 79.3 100 37.0
FAN24G0282 Fragaria x ananassa HOM05D003739 ORTHO05D003996 2.4e-10 72.0 133 39.1
CDE02G4347 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 3.1e-10 71.6 55 61.8
Glyma.16G093750 Glycine max HOM05D003739 ORTHO05D003996 9.2e-10 70.1 72 48.6
Sc19g0000570 Simmondsia chinensis HOM05D003739 ORTHO05D003996 2.7e-09 68.6 629 26.2
SMO293G0020 Selaginella moellendorffii HOM05D027797 ORTHO05D003996 1.3e-08 66.2 324 30.2
Thhalv10000433m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 8.6e-08 63.5 70 47.1
HPP92_008918 Vanilla planifolia HOM05D003739 ORTHO05D003996 1.1e-07 63.2 111 41.4
Atru.chr5.3066 Acer truncatum HOM05D003739 ORTHO05D003996 1.9e-07 62.4 113 36.3
Hma1.2p1_0088F.1_g045220 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 1.2e-06 59.7 67 46.3
Solyc02g081640.4 Solanum lycopersicum HOM05D003739 ORTHO05D003996 1.6e-06 59.3 333 27.3
FAN20G1594 Fragaria x ananassa HOM05D003739 ORTHO05D003996 8.0e-06 57.0 133 37.6


User provided reference genes

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