Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0031 Trochodendron aralioides HOM05D006764 ORTHO05D008516 4.0e-190 667.9 333 100.0
GSVIVG01023281001 Vitis vinifera HOM05D006764 ORTHO05D008516 8.4e-148 527.3 330 78.5
Dinv01845 Davidia involucrata HOM05D006764 ORTHO05D008516 3.1e-142 508.8 333 73.9
Potri.004G222300 Populus trichocarpa HOM05D006764 ORTHO05D008516 6.4e-140 501.1 330 75.5
Atru.chr6.751 Acer truncatum HOM05D006764 ORTHO05D008516 1.5e-136 490.0 330 73.9
Prupe.1G576600 Prunus persica HOM05D006764 ORTHO05D008516 1.9e-136 489.6 330 73.6
MD08G1240100 Malus domestica HOM05D006764 ORTHO05D008516 5.6e-136 488.0 330 73.0
QL02p099872 Quercus lobata HOM05D006764 ORTHO05D008516 7.4e-136 487.6 326 72.4
Actinidia39013 Actinidia chinensis HOM05D006764 ORTHO05D008516 1.4e-134 483.4 333 70.9
CiPaw.05G051400 Carya illinoinensis HOM05D006764 ORTHO05D008516 3.4e-133 478.8 326 72.1
Manes.07G022500 Manihot esculenta HOM05D006764 ORTHO05D008516 2.9e-132 475.7 328 72.6
Gorai.012G166600 Gossypium raimondii HOM05D006764 ORTHO05D008516 7.1e-131 471.1 330 68.8
Gohir.A04G130100 Gossypium hirsutum HOM05D006764 ORTHO05D008516 1.2e-130 470.3 330 68.5
Glyma.12G168200 Glycine max HOM05D006764 ORTHO05D008516 2.7e-130 469.2 327 70.6
Gohir.D04G175300 Gossypium hirsutum HOM05D006764 ORTHO05D008516 6.0e-130 468.0 330 68.5
Nn5g27693 Nelumbo nucifera HOM05D006764 ORTHO05D008516 1.8e-129 466.5 315 75.2
Ciclev10001742m.g Citrus clementina HOM05D006764 ORTHO05D008516 5.1e-129 464.9 330 72.4
PGR042G2798 Punica granatum HOM05D006764 ORTHO05D008516 5.1e-129 464.9 309 73.1
Thecc.02G025400 Theobroma cacao HOM05D006764 ORTHO05D008516 8.7e-129 464.2 329 69.6
Rhsim11G0125600 Rhododendron simsii HOM05D006764 ORTHO05D008516 1.1e-128 463.8 333 69.1
Glyma.16G004200 Glycine max HOM05D006764 ORTHO05D008516 1.5e-128 463.4 328 69.5
Medtr2g006100 Medicago truncatula HOM05D006764 ORTHO05D008516 1.9e-128 463.0 325 69.5
MD15G1432200 Malus domestica HOM05D006764 ORTHO05D008516 9.6e-128 460.7 330 69.1
VMungo0540G1274 Vigna mungo HOM05D006764 ORTHO05D008516 2.8e-127 459.1 327 68.8
Lj6g0021331 Lotus japonicus HOM05D006764 ORTHO05D008516 3.7e-127 458.8 327 70.3
Psat1g221840 Pisum sativum HOM05D006764 ORTHO05D008516 6.2e-127 458.0 330 68.8
Sc16g0001680 Simmondsia chinensis HOM05D006764 ORTHO05D008516 6.2e-127 458.0 327 67.6
RcHm_v2.0_Chr7g0220831 Rosa chinensis HOM05D006764 ORTHO05D008516 1.4e-126 456.8 333 68.5
PSO170G2545 Papaver somniferum HOM05D006764 ORTHO05D008516 3.1e-126 455.7 327 68.2
MELO3C011834.2 Cucumis melo HOM05D006764 ORTHO05D008516 9.0e-126 454.1 327 70.0
Cc02_g22970 Coffea canephora HOM05D006764 ORTHO05D008516 1.5e-125 453.4 318 69.2
FvH4_5g28680 Fragaria vesca HOM05D006764 ORTHO05D008516 2.0e-125 453.0 333 68.2
ClCG11G013370 Citrullus lanatus HOM05D006764 ORTHO05D008516 1.3e-124 450.3 327 69.4
CsaV3_5G029880 Cucumis sativus L. HOM05D006764 ORTHO05D008516 1.3e-124 450.3 320 71.2
Sabra01G0168400 Salix brachista HOM05D006764 ORTHO05D008516 3.8e-124 448.7 330 69.4
Aqoxy6G00131 Aquilegia oxysepala HOM05D006764 ORTHO05D008516 8.4e-124 447.6 330 66.1
CSS0013576 Camellia sinensis var. sinensis HOM05D006764 ORTHO05D008516 1.4e-123 446.8 325 68.6
TPR.G2075 Trifolium pratense HOM05D006764 ORTHO05D008516 1.4e-123 446.8 325 68.3
Phvul.006G217900 Phaseolus vulgaris HOM05D006764 ORTHO05D008516 7.1e-123 444.5 327 67.6
arahy.Tifrunner.gnm1.ann1.FMX4TW Arachis hypogaea HOM05D006764 ORTHO05D008516 3.5e-122 442.2 327 67.6
EL10Ac6g14065 Beta vulgaris HOM05D006764 ORTHO05D008516 4.6e-122 441.8 328 67.4
arahy.Tifrunner.gnm1.ann1.0E87YT Arachis hypogaea HOM05D006764 ORTHO05D008516 6.0e-122 441.4 327 67.3
CANSAT54G1059 Cannabis sativa HOM05D006764 ORTHO05D008516 1.8e-121 439.9 325 65.8
HanXRQChr10g0294521 Helianthus annuus HOM05D006764 ORTHO05D008516 5.1e-121 438.3 333 64.9
Eucgr.G00355 Eucalyptus grandis HOM05D006764 ORTHO05D008516 6.3e-119 431.4 310 68.1
Sopen10g013910 Solanum pennellii HOM05D006764 ORTHO05D008516 9.0e-118 427.6 330 63.3
ECA234G3405 Erigeron canadensis HOM05D006764 ORTHO05D008516 1.5e-117 426.8 333 63.1
Solyc10g044910.2 Solanum lycopersicum HOM05D006764 ORTHO05D008516 2.5e-115 419.5 330 62.4
THA.LOC104807147 Tarenaya hassleriana HOM05D006764 ORTHO05D008516 2.1e-114 416.4 312 67.0
MBI17_g21477_MAGBIO Magnolia biondii HOM05D006764 ORTHO05D008516 3.6e-114 415.6 308 69.2
HPP92_009268 Vanilla planifolia HOM05D006764 ORTHO05D008516 5.1e-113 411.8 308 64.6
AT4G06676 Arabidopsis thaliana HOM05D006764 ORTHO05D008516 1.5e-112 410.2 315 66.0
AL6G41260 Arabidopsis lyrata HOM05D006764 ORTHO05D008516 3.3e-112 409.1 315 66.0
TWI59G0639 Tripterygium wilfordii HOM05D006764 ORTHO05D008516 9.7e-112 407.5 330 63.3
Lalb_Chr18g0061021 Lupinus albus HOM05D006764 ORTHO05D008516 3.1e-110 402.5 331 61.6
Nitab4.5_0000667g0120 Nicotiana tabacum HOM05D006764 ORTHO05D008516 2.0e-109 399.8 321 62.6
CARHR260060 Cardamine hirsuta HOM05D006764 ORTHO05D008516 2.6e-109 399.4 313 64.9
vmacro01728 Vaccinium macrocarpon HOM05D006764 ORTHO05D008516 1.4e-107 393.7 276 69.6
SGA_v2.0_scaffold304G47898 Striga asiatica HOM05D006764 ORTHO05D008516 6.1e-106 388.3 279 68.8
Carub.0006s2639 Capsella rubella HOM05D006764 ORTHO05D008516 1.0e-105 387.5 312 65.4
AUR62042713 Chenopodium quinoa HOM05D006764 ORTHO05D008516 2.3e-105 386.3 328 59.5
BcaB01g01263 Brassica carinata HOM05D006764 ORTHO05D008516 2.0e-104 383.3 313 63.3
BcaC04g20869 Brassica carinata HOM05D006764 ORTHO05D008516 9.1e-102 374.4 315 61.9
Oeu023412.2 Olea europaea HOM05D006764 ORTHO05D008516 3.5e-101 372.5 273 68.9
BraA09t38619Z Brassica rapa HOM05D006764 ORTHO05D008516 4.5e-101 372.1 316 61.7
Migut.B00802 Erythranthe guttata HOM05D006764 ORTHO05D008516 1.3e-100 370.5 328 60.7
unitig_748.g8283 Utricularia gibba HOM05D006764 ORTHO05D008516 2.2e-100 369.8 330 57.3
Thhalv10028801m.g Eutrema salsugineum HOM05D006764 ORTHO05D008516 2.9e-100 369.4 315 60.6
COL.COLO4_17757 Corchorus olitorius HOM05D006764 ORTHO05D008516 1.4e-99 367.1 332 61.1
CAN.G1108.5 Capsicum annuum HOM05D006764 ORTHO05D008516 1.8e-97 360.1 271 64.9
A09p30490 Brassica napus HOM05D006764 ORTHO05D008516 9.7e-96 354.4 334 57.5
Peaxi162Scf00002g00261 Petunia axillaris HOM05D006764 ORTHO05D008516 2.4e-94 349.7 318 57.2
Aa31LG3G14080 Aethionema arabicum HOM05D006764 ORTHO05D008516 2.0e-93 346.7 332 56.9
ATR0709G017 Amborella trichopoda HOM05D006764 ORTHO05D008516 4.5e-93 345.5 322 54.0
Haze_01822 Corylus avellana HOM05D006764 ORTHO05D008516 2.2e-92 343.2 348 53.4
FAN13G1303 Fragaria x ananassa HOM05D006764 ORTHO05D008516 3.8e-92 342.4 301 59.5
FAN18G3575 Fragaria x ananassa HOM05D006764 ORTHO05D008516 7.2e-91 338.2 272 63.6
FAN08G1175 Fragaria x ananassa HOM05D006764 ORTHO05D008516 2.7e-90 336.3 287 61.7
Duzib132G0537 Durio zibethinus HOM05D006764 ORTHO05D008516 6.1e-90 335.1 298 58.1
Sp6g10710 Schrenkiella parvula HOM05D006764 ORTHO05D008516 2.9e-84 316.2 307 56.4
Ca_00050_v3 Cicer arietinum L. HOM05D006764 ORTHO05D008516 3.2e-83 312.8 241 65.6
BolC9t56687H Brassica oleracea HOM05D006764 ORTHO05D008516 7.2e-83 311.6 253 62.5
AUR62014213 Chenopodium quinoa HOM05D006764 ORTHO05D008516 9.4e-83 311.2 328 52.4
PSO017G2259 Papaver somniferum HOM05D006764 ORTHO05D008516 6.1e-82 308.5 226 68.1
SEGI_07291 Sequoiadendron giganteum HOM05D006764 ORTHO05D008516 8.0e-82 308.1 333 50.2
Nitab4.5_0008098g0020 Nicotiana tabacum HOM05D006764 ORTHO05D008516 1.0e-81 307.8 330 50.9
Zm00001eb082660 Zea mays HOM05D006764 ORTHO05D008516 1.8e-81 307.0 322 52.2
Lsat_1_v5_gn_5_103781 Lactuca sativa HOM05D006764 ORTHO05D008516 7.5e-80 301.6 242 63.2
C09p38380 Brassica napus HOM05D006764 ORTHO05D008516 4.8e-79 298.9 244 61.5
SHI04828 Sapria himalayana HOM05D006764 ORTHO05D008516 1.8e-78 297.0 264 60.6
Sed0008550 Sechium edule HOM05D000755 ORTHO05D000642 4.1e-78 295.8 278 59.7
SalBow7G3863 Salvia bowleyana HOM05D006764 ORTHO05D008516 2.7e-69 266.5 221 62.4
Cpa.g.sc30.47 Carica papaya HOM05D006764 ORTHO05D008516 3.9e-68 262.7 167 77.2
Pp3c15_15530 Physcomitrium patens HOM05D006764 ORTHO05D008516 1.5e-67 260.8 309 45.3
SMO367G0572 Selaginella moellendorffii HOM05D006764 ORTHO05D008516 2.9e-63 246.5 307 45.9
DCAR_029270 Daucus carota HOM05D006764 ORTHO05D008516 3.7e-63 246.1 338 46.4
Mapoly0025s0102 Marchantia polymorpha HOM05D006764 ORTHO05D008516 1.7e-60 237.3 301 44.2
Cfa005482 Carpinus fangiana HOM05D006764 ORTHO05D008516 6.8e-49 198.7 122 74.6
Hund12938 Selenicereus undatus HOM05D006764 ORTHO05D008516 2.1e-45 187.2 380 34.2
Lj5A261T39 Lonicera japonica HOM05D006764 ORTHO05D008516 3.0e-44 183.3 242 46.7
SEGI_28644 Sequoiadendron giganteum HOM05D006764 ORTHO05D008516 1.9e-43 180.6 170 52.4
AagrBONN_evm.TU.Sc2ySwM_228.3284 Anthoceros agrestis HOM05D006764 ORTHO05D008516 2.1e-42 177.2 208 46.2
FAN04G0462 Fragaria x ananassa HOM05D006764 ORTHO05D008516 5.6e-35 152.5 84 82.1
CBR_g19125 Chara braunii HOM05D006764 ORTHO05D008516 1.3e-31 141.4 200 43.5
Os04g0433200 Oryza sativa ssp. japonica HOM05D006764 ORTHO05D008516 1.3e-31 141.4 125 59.2
Hund29476 Selenicereus undatus HOM05D006764 ORTHO05D008516 1.9e-30 137.5 108 59.3
Hund29477 Selenicereus undatus HOM05D006764 ORTHO05D008516 1.9e-30 137.5 108 59.3
Cre01.g032350 Chlamydomonas reinhardtii HOM05D006764 ORTHO05D008516 6.0e-29 132.5 308 32.1
Nn6g34108 Nelumbo nucifera HOM05D006764 ORTHO05D008516 7.1e-22 109.0 69 78.3
Nn3g16387 Nelumbo nucifera HOM05D006764 ORTHO05D008516 1.5e-19 101.3 63 76.2
MCO04G067 Micromonas commoda HOM05D006764 ORTHO05D008516 7.4e-19 99.0 308 25.6
Nn1g06486 Nelumbo nucifera HOM05D027421 ORTHO05D008516 1.0e-15 88.6 123 43.9
Nn1g00311 Nelumbo nucifera HOM05D006764 ORTHO05D008516 5.5e-14 82.8 80 55.0
VMungo1309G2004 Vigna mungo HOM05D006764 ORTHO05D008516 4.1e-09 66.6 59 50.8
MBI17_g13541_MAGBIO Magnolia biondii HOM05D006764 ORTHO05D008516 9.0e-09 65.5 54 64.8
vmacro01729 Vaccinium macrocarpon HOM05D006764 ORTHO05D008516 1.0e-07 62.0 39 71.8
Cc00_g10410 Coffea canephora HOM05D006764 ORTHO05D008516 3.2e-06 57.0 56 55.4


User provided reference genes

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