Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 1.8e-223 778.9 380 100.0
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 4.0e-170 601.7 376 75.8
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 4.9e-168 594.7 378 75.9
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.0e-166 589.3 380 73.4
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.0e-166 589.3 380 73.4
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 7.8e-166 587.4 378 74.9
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 8.6e-165 583.9 380 73.4
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.1e-164 583.6 380 72.6
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.2e-161 573.5 374 74.1
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 2.9e-160 568.9 379 70.4
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 3.2e-159 565.5 379 70.2
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.7e-158 562.4 380 70.8
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 4.3e-156 555.1 380 68.9
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 5.6e-156 554.7 380 68.9
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 7.3e-156 554.3 380 68.7
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 2.1e-155 552.7 381 69.8
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 2.8e-155 552.4 399 67.7
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 2.8e-155 552.4 380 69.2
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 6.8e-154 547.7 380 68.9
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.5e-153 546.6 382 68.8
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 4.4e-153 545.0 380 68.2
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 7.6e-153 544.3 377 69.8
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.8e-152 542.0 379 69.4
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 6.4e-152 541.2 373 69.7
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.4e-151 540.0 376 70.2
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 9.2e-151 537.3 379 66.8
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.3e-149 533.5 377 66.6
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 1.7e-149 533.1 378 67.7
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.7e-149 533.1 376 67.8
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 2.3e-149 532.7 376 67.6
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 5.1e-149 531.6 375 66.4
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 6.6e-149 531.2 376 67.6
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.5e-148 529.3 378 66.9
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 4.3e-148 528.5 379 66.8
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 7.3e-148 527.7 374 69.3
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 7.3e-148 527.7 378 66.7
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 3.6e-147 525.4 379 65.2
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 4.7e-147 525.0 378 66.1
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 5.2e-146 521.5 382 67.0
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 5.8e-145 518.1 376 68.1
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 7.6e-145 517.7 376 67.8
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 9.9e-145 517.3 377 65.5
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 2.2e-144 516.2 375 66.4
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 3.8e-144 515.4 378 63.2
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 4.9e-144 515.0 379 64.6
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 4.2e-143 511.9 380 65.3
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 5.4e-143 511.5 377 67.1
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 1.2e-142 510.4 425 61.2
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 2.1e-142 509.6 375 65.6
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 3.5e-142 508.8 383 64.0
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 6.0e-142 508.1 356 72.5
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 1.3e-141 506.9 380 62.9
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.3e-141 506.9 378 65.1
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.7e-141 506.5 379 67.3
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 2.5e-140 502.7 407 60.2
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 3.3e-140 502.3 375 64.8
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 7.3e-140 501.1 379 62.0
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 2.8e-139 499.2 362 64.6
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 4.8e-139 498.4 376 61.4
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 8.1e-139 497.7 380 63.7
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 2.4e-138 496.1 381 61.7
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 4.0e-138 495.4 375 65.6
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 9.0e-138 494.2 379 64.1
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 7.6e-137 491.1 362 68.0
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 2.2e-136 489.6 379 62.5
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 4.9e-136 488.4 378 64.3
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 4.9e-136 488.4 373 65.1
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 6.4e-136 488.0 379 62.5
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 6.4e-136 488.0 377 61.3
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 4.2e-135 485.3 381 60.9
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 7.1e-135 484.6 362 67.1
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 7.1e-135 484.6 382 60.5
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 7.1e-135 484.6 375 62.1
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.2e-134 483.8 379 61.7
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.2e-134 483.8 379 64.4
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 6.0e-134 481.5 379 60.4
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.0e-133 480.7 375 62.9
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 1.8e-133 479.9 356 66.9
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 6.7e-133 478.0 382 61.5
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 1.5e-132 476.9 384 58.9
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 3.3e-132 475.7 381 60.9
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 7.4e-132 474.6 377 62.6
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.3e-131 473.8 375 61.3
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.6e-131 473.4 383 61.4
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.6e-131 473.4 383 61.4
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 3.1e-130 469.2 403 58.8
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 9.9e-129 464.2 373 61.7
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.4e-127 459.5 326 66.3
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 5.5e-127 458.4 303 73.3
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 7.1e-127 458.0 380 59.7
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 4.6e-126 455.3 352 61.4
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 4.3e-124 448.7 378 61.1
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 5.6e-124 448.4 378 58.2
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.9e-120 436.0 304 68.4
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 6.5e-120 434.9 375 57.6
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.1e-119 434.1 375 57.1
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 4.2e-119 432.2 322 67.4
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.6e-118 430.3 375 57.1
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.1e-116 424.1 380 57.9
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 2.7e-110 402.9 279 70.3
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 2.5e-108 396.4 275 69.5
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 4.8e-107 392.1 287 65.9
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 9.4e-103 377.9 254 70.5
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 3.6e-102 375.9 259 71.4
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.1e-100 370.9 396 52.0
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 6.3e-99 365.2 285 60.7
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 9.1e-98 361.3 381 47.2
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 8.0e-94 348.2 379 48.0
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.3e-93 346.7 342 50.9
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 6.7e-93 345.1 365 47.7
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 6.3e-91 338.6 373 47.5
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 2.2e-88 330.1 225 72.0
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.6e-81 307.4 215 67.4
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 3.1e-74 283.1 186 71.0
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.5e-71 274.2 391 36.8
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 3.0e-69 266.5 194 63.4
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 5.8e-60 235.7 167 68.3
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 7.3e-47 192.2 149 61.7
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.3e-31 140.2 202 42.1
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.5e-28 131.3 93 74.2
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 7.6e-28 129.0 117 53.8
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 3.8e-27 126.7 116 54.3
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 2.5e-15 87.4 79 53.2
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 3.8e-11 73.6 44 65.9
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 2.7e-09 67.4 139 31.7


User provided reference genes

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