Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 8.4e-227 790.0 403 100.0
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 1.1e-173 613.6 374 84.0
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.4e-165 585.9 366 80.1
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 9.1e-165 583.9 367 80.4
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 1.0e-163 580.5 369 79.4
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 1.7e-163 579.7 372 80.4
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 1.1e-162 577.0 368 78.5
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 9.5e-162 573.9 368 77.4
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 2.8e-161 572.4 392 75.0
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 8.8e-160 567.4 386 76.7
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 8.8e-160 567.4 372 76.3
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 3.4e-159 565.5 381 75.1
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 4.9e-158 561.6 372 75.8
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.4e-157 560.1 384 74.7
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 3.1e-157 558.9 368 76.9
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 4.1e-157 558.5 369 78.3
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 9.2e-157 557.4 373 75.1
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 1.6e-156 556.6 373 75.3
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 1.6e-156 556.6 421 69.6
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 3.5e-156 555.4 373 75.3
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 3.5e-156 555.4 376 74.7
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 2.3e-155 552.7 376 73.7
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 2.9e-155 552.4 373 76.9
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 6.6e-155 551.2 422 69.9
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 8.6e-155 550.8 372 74.5
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 1.9e-154 549.7 367 75.5
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 1.6e-153 546.6 372 74.7
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 1.0e-152 543.9 376 74.7
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 1.4e-152 543.5 371 76.0
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 2.3e-152 542.7 368 76.1
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 1.5e-151 540.0 372 74.5
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 1.5e-151 540.0 384 72.4
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 1.7e-150 536.6 369 75.1
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 3.7e-150 535.4 367 73.8
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 4.9e-150 535.0 371 74.1
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 1.1e-149 533.9 378 71.2
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 1.4e-149 533.5 378 72.8
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 1.8e-149 533.1 375 72.3
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 7.0e-149 531.2 396 68.7
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 2.0e-148 529.6 391 70.6
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 1.7e-147 526.6 376 72.9
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 6.6e-147 524.6 369 72.6
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 5.6e-146 521.5 320 79.7
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 7.3e-146 521.2 371 73.0
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 1.6e-145 520.0 372 73.1
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.8e-145 519.2 375 70.7
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 8.0e-145 517.7 375 70.4
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 1.4e-144 516.9 366 71.9
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 2.3e-144 516.2 376 70.7
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 8.9e-144 514.2 370 71.9
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 2.0e-143 513.1 372 71.5
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 3.4e-143 512.3 375 69.6
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 4.4e-143 511.9 374 68.7
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 4.4e-143 511.9 366 69.7
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 2.9e-142 509.2 330 76.1
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 3.7e-142 508.8 376 68.4
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 2.4e-141 506.1 382 70.4
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 2.4e-141 506.1 370 67.3
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 3.5e-140 502.3 373 68.4
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 4.6e-140 501.9 383 68.9
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 7.8e-140 501.1 368 67.7
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.3e-139 500.4 389 66.1
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 3.0e-139 499.2 368 66.6
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 6.6e-139 498.0 372 67.2
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 8.6e-139 497.7 370 70.0
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.9e-138 496.5 429 62.0
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 4.3e-138 495.4 366 71.3
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 9.5e-138 494.2 429 61.8
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 1.2e-137 493.8 430 61.6
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.2e-137 493.8 426 62.0
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 1.2e-137 493.8 394 65.0
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 2.8e-137 492.7 376 66.2
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 6.2e-137 491.5 430 61.6
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 4.0e-136 488.8 319 76.8
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 4.0e-136 488.8 375 65.3
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 6.8e-136 488.0 379 66.8
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 2.0e-135 486.5 372 65.3
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 1.7e-134 483.4 389 64.8
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 1.7e-134 483.4 391 64.7
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 2.2e-134 483.0 373 64.9
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 2.2e-134 483.0 409 62.1
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 2.9e-134 482.6 345 69.3
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 4.9e-134 481.9 368 64.9
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 1.4e-133 480.3 380 64.7
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 1.9e-133 479.9 419 62.5
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 2.4e-133 479.6 373 66.0
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 4.1e-133 478.8 377 67.1
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 2.7e-132 476.1 372 66.1
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 3.5e-132 475.7 351 67.5
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 7.8e-132 474.6 345 68.7
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 1.7e-131 473.4 372 65.9
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 3.0e-131 472.6 381 65.6
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 5.1e-131 471.9 418 63.2
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 1.1e-130 470.7 351 68.7
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 5.6e-130 468.4 378 62.4
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 5.6e-130 468.4 400 61.8
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 7.3e-130 468.0 399 60.7
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 1.2e-129 467.2 376 63.8
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 1.2e-129 467.2 318 73.0
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 6.2e-129 464.9 372 63.2
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 6.2e-129 464.9 378 63.0
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 8.1e-129 464.5 380 65.0
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 8.9e-128 461.1 437 60.0
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 1.5e-127 460.3 331 69.5
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 5.8e-127 458.4 376 64.4
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 2.9e-126 456.1 379 63.3
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 3.2e-125 452.6 377 63.9
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 4.1e-125 452.2 355 66.5
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 5.4e-125 451.8 376 63.8
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 7.1e-125 451.4 378 63.5
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 7.1e-125 451.4 378 63.5
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 1.2e-124 450.7 377 63.1
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 2.7e-124 449.5 374 63.6
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 7.8e-124 448.0 383 60.1
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 5.1e-123 445.3 383 59.5
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-122 444.1 369 63.1
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 9.6e-122 441.0 370 62.4
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 1.4e-120 437.2 369 62.6
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 9.3e-117 424.5 369 59.9
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 1.0e-115 421.0 426 53.5
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 3.0e-115 419.5 382 58.6
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 5.1e-115 418.7 362 60.5
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 1.1e-114 417.5 275 75.6
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 4.3e-114 415.6 375 59.2
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 7.6e-111 404.8 378 59.5
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 8.4e-110 401.4 408 55.6
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 3.0e-107 392.9 321 61.7
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 5.1e-107 392.1 290 65.2
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 8.7e-107 391.3 371 57.7
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.1e-104 384.4 373 56.8
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 2.9e-102 376.3 228 80.7
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 4.9e-102 375.6 401 50.6
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 1.3e-97 360.9 240 75.0
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 3.1e-96 356.3 306 61.8
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 7.6e-95 351.7 338 53.8
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 4.9e-94 349.0 337 52.8
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 1.2e-92 344.4 257 69.6
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 5.1e-91 339.0 366 51.6
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 6.7e-91 338.6 368 51.4
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 1.9e-90 337.0 368 51.4
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 2.6e-87 326.6 364 49.7
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 3.4e-87 326.2 364 49.7
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 1.1e-85 321.2 368 49.7
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 3.6e-84 316.2 349 51.0
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 6.1e-84 315.5 376 47.6
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 3.0e-83 313.2 393 47.6
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 6.7e-83 312.0 353 49.0
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 6.3e-81 305.4 229 69.9
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 3.7e-73 279.6 338 47.9
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 1.1e-66 258.1 171 74.9
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 1.5e-61 241.1 327 42.8
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 2.5e-53 213.8 152 69.7
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 1.8e-51 207.6 125 79.2
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 5.7e-50 202.6 132 77.3
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 5.7e-50 202.6 132 77.3
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 7.0e-48 195.7 199 52.8
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 3.5e-39 166.8 132 69.7
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 3.8e-38 163.3 94 81.9
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 1.8e-35 154.5 166 51.8
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 2.1e-28 131.0 133 53.4
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 3.1e-27 127.1 119 54.6
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 7.5e-26 122.5 84 72.6
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 8.3e-25 119.0 98 55.1
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 1.6e-23 114.8 111 51.4
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 7.8e-23 112.5 94 58.5
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 1.0e-22 112.1 94 55.3
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 3.9e-22 110.2 101 53.5
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 8.6e-22 109.0 105 62.9
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 2.3e-19 100.9 125 45.6
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 3.4e-18 97.1 306 30.4
C07p16950 Brassica napus HOM05D003649 ORTHO05D027520 4.9e-17 93.2 165 38.2
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 1.4e-16 91.7 96 55.2
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 1.3e-14 85.1 54 79.6
BolC7t42200H Brassica oleracea HOM05D003649 ORTHO05D027520 6.6e-14 82.8 111 42.3
C07p16940 Brassica napus HOM05D003649 ORTHO05D027520 1.4e-11 75.1 139 33.8
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 2.4e-11 74.3 49 69.4
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 8.9e-11 72.4 54 55.6
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 8.9e-11 72.4 54 55.6
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 8.9e-11 72.4 210 33.3
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 9.9e-10 68.9 89 43.8
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 1.3e-09 68.6 57 66.7


User provided reference genes

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